MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus amylovorus GRL 1112 plasmid1

Total Repeats: 108

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015319	ACA	2	6	107	112	66.67 %	0 %	0 %	33.33 %	Non-Coding
2	NC_015319	TCT	2	6	143	148	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_015319	TAA	2	6	216	221	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_015319	TCA	2	6	251	256	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_015319	TTA	2	6	260	265	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_015319	AAT	2	6	274	279	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_015319	TAT	2	6	339	344	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_015319	ATA	2	6	2001	2006	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_015319	CCT	2	6	2341	2346	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_015319	ATT	2	6	2354	2359	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_015319	TCA	2	6	2533	2538	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_015319	AAT	2	6	2606	2611	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_015319	TAT	2	6	2639	2644	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_015319	GTG	2	6	2655	2660	0 %	33.33 %	66.67 %	0 %	Non-Coding
15	NC_015319	ATT	2	6	2692	2697	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_015319	AAC	2	6	2713	2718	66.67 %	0 %	0 %	33.33 %	Non-Coding
17	NC_015319	TAT	2	6	3800	3805	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_015319	GCT	2	6	3844	3849	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_015319	AGG	2	6	3879	3884	33.33 %	0 %	66.67 %	0 %	Non-Coding
20	NC_015319	ATA	2	6	5373	5378	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_015319	TCC	2	6	6105	6110	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_015319	CTT	2	6	6150	6155	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_015319	TCT	2	6	6160	6165	0 %	66.67 %	0 %	33.33 %	Non-Coding
24	NC_015319	AAT	2	6	7010	7015	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_015319	GCT	2	6	7016	7021	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_015319	TAC	2	6	7033	7038	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_015319	ATT	2	6	7189	7194	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_015319	GTT	2	6	7400	7405	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_015319	CTT	2	6	7901	7906	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_015319	TAA	2	6	7947	7952	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_015319	ACA	2	6	8166	8171	66.67 %	0 %	0 %	33.33 %	Non-Coding
32	NC_015319	TAT	2	6	8291	8296	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_015319	GTA	2	6	8347	8352	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NC_015319	TAC	2	6	8420	8425	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
35	NC_015319	TTC	2	6	9363	9368	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_015319	AAT	2	6	9411	9416	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_015319	ATT	2	6	9505	9510	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_015319	CAA	2	6	9517	9522	66.67 %	0 %	0 %	33.33 %	Non-Coding
39	NC_015319	TTC	2	6	9619	9624	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_015319	TGA	2	6	9729	9734	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_015319	CAT	2	6	9769	9774	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_015319	AAT	2	6	9837	9842	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_015319	CAT	2	6	9871	9876	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_015319	GAA	2	6	9945	9950	66.67 %	0 %	33.33 %	0 %	Non-Coding
45	NC_015319	ATT	3	9	9999	10007	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_015319	ATT	2	6	10049	10054	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_015319	TAA	2	6	10184	10189	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_015319	ATC	2	6	10241	10246	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_015319	ATA	2	6	10253	10258	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_015319	TAA	2	6	10368	10373	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_015319	CTT	2	6	10831	10836	0 %	66.67 %	0 %	33.33 %	Non-Coding
52	NC_015319	CCT	2	6	11398	11403	0 %	33.33 %	0 %	66.67 %	Non-Coding
53	NC_015319	ATA	2	6	11485	11490	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_015319	TTA	2	6	11507	11512	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_015319	GTG	2	6	11552	11557	0 %	33.33 %	66.67 %	0 %	Non-Coding
56	NC_015319	GTT	2	6	11648	11653	0 %	66.67 %	33.33 %	0 %	Non-Coding
57	NC_015319	ATT	2	6	13792	13797	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_015319	ATC	2	6	15206	15211	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
59	NC_015319	CCA	2	6	16504	16509	33.33 %	0 %	0 %	66.67 %	Non-Coding
60	NC_015319	TCA	2	6	16809	16814	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_015319	CCA	2	6	16863	16868	33.33 %	0 %	0 %	66.67 %	Non-Coding
62	NC_015319	GTG	2	6	17028	17033	0 %	33.33 %	66.67 %	0 %	Non-Coding
63	NC_015319	CAC	2	6	17979	17984	33.33 %	0 %	0 %	66.67 %	Non-Coding
64	NC_015319	TAT	2	6	19134	19139	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_015319	TTA	2	6	19280	19285	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_015319	TAT	2	6	19307	19312	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_015319	ATT	2	6	19487	19492	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_015319	CTG	2	6	19501	19506	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
69	NC_015319	TAT	2	6	19612	19617	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_015319	ATA	2	6	19640	19645	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_015319	CAA	2	6	19728	19733	66.67 %	0 %	0 %	33.33 %	Non-Coding
72	NC_015319	ATT	2	6	19797	19802	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_015319	GGC	2	6	20245	20250	0 %	0 %	66.67 %	33.33 %	Non-Coding
74	NC_015319	TCA	2	6	20292	20297	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
75	NC_015319	ATG	2	6	20318	20323	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
76	NC_015319	CTG	2	6	20360	20365	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
77	NC_015319	CAT	2	6	20504	20509	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
78	NC_015319	ATG	2	6	20618	20623	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
79	NC_015319	CTT	2	6	21469	21474	0 %	66.67 %	0 %	33.33 %	Non-Coding
80	NC_015319	ATT	2	6	21492	21497	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_015319	TTA	2	6	21514	21519	33.33 %	66.67 %	0 %	0 %	Non-Coding
82	NC_015319	AGA	2	6	21677	21682	66.67 %	0 %	33.33 %	0 %	Non-Coding
83	NC_015319	CCT	2	6	21686	21691	0 %	33.33 %	0 %	66.67 %	Non-Coding
84	NC_015319	TAT	2	6	21758	21763	33.33 %	66.67 %	0 %	0 %	Non-Coding
85	NC_015319	CAA	2	6	21866	21871	66.67 %	0 %	0 %	33.33 %	Non-Coding
86	NC_015319	GAG	2	6	21914	21919	33.33 %	0 %	66.67 %	0 %	Non-Coding
87	NC_015319	AAC	2	6	21939	21944	66.67 %	0 %	0 %	33.33 %	Non-Coding
88	NC_015319	GTC	2	6	22164	22169	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
89	NC_015319	ATT	2	6	22737	22742	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_015319	TAT	2	6	23940	23945	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_015319	ATA	2	6	23970	23975	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_015319	TAT	2	6	23976	23981	33.33 %	66.67 %	0 %	0 %	Non-Coding
93	NC_015319	GAT	2	6	24248	24253	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
94	NC_015319	TAA	2	6	24511	24516	66.67 %	33.33 %	0 %	0 %	Non-Coding
95	NC_015319	CTG	3	9	24561	24569	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
96	NC_015319	TAC	2	6	24683	24688	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_015319	ATA	3	9	24689	24697	66.67 %	33.33 %	0 %	0 %	Non-Coding
98	NC_015319	TGA	2	6	26564	26569	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
99	NC_015319	GTG	2	6	27823	27828	0 %	33.33 %	66.67 %	0 %	Non-Coding
100	NC_015319	TAA	2	6	27848	27853	66.67 %	33.33 %	0 %	0 %	Non-Coding
101	NC_015319	GTA	2	6	27882	27887	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
102	NC_015319	CCA	2	6	27942	27947	33.33 %	0 %	0 %	66.67 %	Non-Coding
103	NC_015319	CAC	2	6	28771	28776	33.33 %	0 %	0 %	66.67 %	Non-Coding
104	NC_015319	GTA	2	6	28779	28784	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
105	NC_015319	ATA	2	6	28892	28897	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_015319	ATT	2	6	33365	33370	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_015319	ATA	2	6	33408	33413	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_015319	TAT	2	6	33550	33555	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.