MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Anaerolinea thermophila UNI-1

Total Repeats: 66

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_014960	TATTCT	2	12	6089	6100	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
2	NC_014960	ATCGCG	2	12	104625	104636	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
3	NC_014960	CCAGCG	2	12	119712	119723	16.67 %	0 %	33.33 %	50 %	Non-Coding
4	NC_014960	CCTGTA	2	12	119888	119899	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
5	NC_014960	CTTCCG	2	12	184563	184574	0 %	33.33 %	16.67 %	50 %	Non-Coding
6	NC_014960	CTTTTT	2	12	201108	201119	0 %	83.33 %	0 %	16.67 %	Non-Coding
7	NC_014960	TCTTAC	2	12	255704	255715	16.67 %	50 %	0 %	33.33 %	Non-Coding
8	NC_014960	TTCTCC	2	12	283668	283679	0 %	50 %	0 %	50 %	Non-Coding
9	NC_014960	AAGGCA	2	12	329404	329415	50 %	0 %	33.33 %	16.67 %	Non-Coding
10	NC_014960	AATCAA	2	12	442857	442868	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
11	NC_014960	GACCTT	2	12	532649	532660	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
12	NC_014960	CCATAT	2	12	537220	537231	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_014960	GGGTGG	2	12	587356	587367	0 %	16.67 %	83.33 %	0 %	Non-Coding
14	NC_014960	TGGGGT	2	12	643205	643216	0 %	33.33 %	66.67 %	0 %	Non-Coding
15	NC_014960	TGAGGC	2	12	670848	670859	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
16	NC_014960	CTTTTT	2	12	674291	674302	0 %	83.33 %	0 %	16.67 %	Non-Coding
17	NC_014960	TACATT	2	12	725097	725108	33.33 %	50 %	0 %	16.67 %	Non-Coding
18	NC_014960	TCCCTC	2	12	767377	767388	0 %	33.33 %	0 %	66.67 %	Non-Coding
19	NC_014960	AAGTTT	2	12	821226	821237	33.33 %	50 %	16.67 %	0 %	Non-Coding
20	NC_014960	ATGCTC	2	12	826083	826094	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
21	NC_014960	AAATTT	2	12	862413	862424	50 %	50 %	0 %	0 %	Non-Coding
22	NC_014960	TCCTTC	2	12	893469	893480	0 %	50 %	0 %	50 %	Non-Coding
23	NC_014960	TCACCC	2	12	953171	953182	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
24	NC_014960	ATTTAC	2	12	1010537	1010548	33.33 %	50 %	0 %	16.67 %	Non-Coding
25	NC_014960	AACCTG	2	12	1036278	1036289	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
26	NC_014960	AAAAAT	2	12	1137063	1137074	83.33 %	16.67 %	0 %	0 %	Non-Coding
27	NC_014960	ATTATA	2	12	1263009	1263020	50 %	50 %	0 %	0 %	Non-Coding
28	NC_014960	TTTGCT	2	12	1369535	1369546	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
29	NC_014960	CATTGC	2	12	1379849	1379860	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
30	NC_014960	TGTGAG	2	12	1394679	1394690	16.67 %	33.33 %	50 %	0 %	Non-Coding
31	NC_014960	TATTGT	2	12	1421630	1421641	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
32	NC_014960	ATGCAT	2	12	1488619	1488630	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
33	NC_014960	CCAATT	2	12	1525268	1525279	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_014960	GTTTTA	2	12	1525355	1525366	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
35	NC_014960	AGAAAA	2	12	1681549	1681560	83.33 %	0 %	16.67 %	0 %	Non-Coding
36	NC_014960	TTATAA	2	12	1735754	1735765	50 %	50 %	0 %	0 %	Non-Coding
37	NC_014960	CCAATT	2	12	1899996	1900007	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NC_014960	ATGCTT	2	12	1956181	1956192	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
39	NC_014960	AGAATG	2	12	2109458	2109469	50 %	16.67 %	33.33 %	0 %	Non-Coding
40	NC_014960	AGGAGA	2	12	2128884	2128895	50 %	0 %	50 %	0 %	Non-Coding
41	NC_014960	AAACTT	2	12	2157909	2157920	50 %	33.33 %	0 %	16.67 %	Non-Coding
42	NC_014960	CCTATC	2	12	2159020	2159031	16.67 %	33.33 %	0 %	50 %	Non-Coding
43	NC_014960	CACAGG	2	12	2187007	2187018	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
44	NC_014960	TCAAAA	2	12	2211900	2211911	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
45	NC_014960	TCCTGT	2	12	2257750	2257761	0 %	50 %	16.67 %	33.33 %	Non-Coding
46	NC_014960	CAGGGA	2	12	2419196	2419207	33.33 %	0 %	50 %	16.67 %	Non-Coding
47	NC_014960	AAGAAA	2	12	2449039	2449050	83.33 %	0 %	16.67 %	0 %	Non-Coding
48	NC_014960	CCATTT	2	12	2457484	2457495	16.67 %	50 %	0 %	33.33 %	Non-Coding
49	NC_014960	AGAAAC	2	12	2516612	2516623	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
50	NC_014960	CCTTTC	2	12	2552941	2552952	0 %	50 %	0 %	50 %	Non-Coding
51	NC_014960	GTTTTC	2	12	2809048	2809059	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
52	NC_014960	ACAAAA	2	12	2815379	2815390	83.33 %	0 %	0 %	16.67 %	Non-Coding
53	NC_014960	TGTGTT	2	12	2938537	2938548	0 %	66.67 %	33.33 %	0 %	Non-Coding
54	NC_014960	AAGGTC	2	12	2942207	2942218	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
55	NC_014960	GTTTTT	2	12	3023360	3023371	0 %	83.33 %	16.67 %	0 %	Non-Coding
56	NC_014960	ATGGGG	2	12	3050563	3050574	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
57	NC_014960	TTCAGT	2	12	3137549	3137560	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
58	NC_014960	CAACGC	2	12	3145153	3145164	33.33 %	0 %	16.67 %	50 %	Non-Coding
59	NC_014960	GGAGCG	2	12	3252496	3252507	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
60	NC_014960	GGCAAA	2	12	3278205	3278216	50 %	0 %	33.33 %	16.67 %	Non-Coding
61	NC_014960	GTCCCC	2	12	3326864	3326875	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
62	NC_014960	GCGAAC	2	12	3354868	3354879	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
63	NC_014960	CAGGCT	2	12	3354982	3354993	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
64	NC_014960	TCCCCT	2	12	3384067	3384078	0 %	33.33 %	0 %	66.67 %	Non-Coding
65	NC_014960	GGCGAG	2	12	3434859	3434870	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
66	NC_014960	ACCCTT	2	12	3480796	3480807	16.67 %	33.33 %	0 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.