Hexa-nucleotide Coding Repeats of Ruminococcus albus 7 plasmid pRUMAL02
Total Repeats: 117
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014825 | TTTAGC | 2 | 12 | 139 | 150 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788692 |
2 | NC_014825 | CAGCGT | 2 | 12 | 482 | 493 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 319788692 |
3 | NC_014825 | TGTTCG | 2 | 12 | 2586 | 2597 | 0 % | 50 % | 33.33 % | 16.67 % | 319788694 |
4 | NC_014825 | GTATGG | 2 | 12 | 3497 | 3508 | 16.67 % | 33.33 % | 50 % | 0 % | 319788694 |
5 | NC_014825 | TACCAT | 2 | 12 | 7755 | 7766 | 33.33 % | 33.33 % | 0 % | 33.33 % | 319788699 |
6 | NC_014825 | CAGACC | 2 | 12 | 11262 | 11273 | 33.33 % | 0 % | 16.67 % | 50 % | 319788702 |
7 | NC_014825 | TATCTT | 2 | 12 | 19991 | 20002 | 16.67 % | 66.67 % | 0 % | 16.67 % | 319788710 |
8 | NC_014825 | GTCATT | 2 | 12 | 27745 | 27756 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788717 |
9 | NC_014825 | CAAGGT | 2 | 12 | 29357 | 29368 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 319788719 |
10 | NC_014825 | CGGTAT | 2 | 12 | 29783 | 29794 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 319788719 |
11 | NC_014825 | TTTGTT | 2 | 12 | 31112 | 31123 | 0 % | 83.33 % | 16.67 % | 0 % | 319788721 |
12 | NC_014825 | TTCAGC | 2 | 12 | 34723 | 34734 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788725 |
13 | NC_014825 | CAGCCG | 2 | 12 | 37445 | 37456 | 16.67 % | 0 % | 33.33 % | 50 % | 319788726 |
14 | NC_014825 | CGGTAA | 2 | 12 | 43399 | 43410 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 319788731 |
15 | NC_014825 | TCAGTA | 2 | 12 | 43530 | 43541 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 319788731 |
16 | NC_014825 | GCTTAT | 2 | 12 | 43562 | 43573 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788731 |
17 | NC_014825 | GCTCAT | 2 | 12 | 44324 | 44335 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788731 |
18 | NC_014825 | AGATCA | 2 | 12 | 48392 | 48403 | 50 % | 16.67 % | 16.67 % | 16.67 % | 319788732 |
19 | NC_014825 | ATCTCG | 2 | 12 | 49963 | 49974 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788733 |
20 | NC_014825 | TTGAAA | 2 | 12 | 56967 | 56978 | 50 % | 33.33 % | 16.67 % | 0 % | 319788737 |
21 | NC_014825 | TATGCC | 2 | 12 | 64643 | 64654 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788745 |
22 | NC_014825 | GTTATT | 2 | 12 | 65955 | 65966 | 16.67 % | 66.67 % | 16.67 % | 0 % | 319788746 |
23 | NC_014825 | TTATAT | 2 | 12 | 67204 | 67215 | 33.33 % | 66.67 % | 0 % | 0 % | 319788746 |
24 | NC_014825 | CCCTCA | 2 | 12 | 68227 | 68238 | 16.67 % | 16.67 % | 0 % | 66.67 % | 319788747 |
25 | NC_014825 | TACCTG | 2 | 12 | 70039 | 70050 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788748 |
26 | NC_014825 | AACTTC | 2 | 12 | 72040 | 72051 | 33.33 % | 33.33 % | 0 % | 33.33 % | 319788750 |
27 | NC_014825 | CTGAAA | 2 | 12 | 73577 | 73588 | 50 % | 16.67 % | 16.67 % | 16.67 % | 319788753 |
28 | NC_014825 | AAACTG | 2 | 12 | 73993 | 74004 | 50 % | 16.67 % | 16.67 % | 16.67 % | 319788754 |
29 | NC_014825 | CATCAG | 2 | 12 | 76916 | 76927 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 319788757 |
30 | NC_014825 | CTACCT | 2 | 12 | 78872 | 78883 | 16.67 % | 33.33 % | 0 % | 50 % | 319788760 |
31 | NC_014825 | GAAATC | 2 | 12 | 81527 | 81538 | 50 % | 16.67 % | 16.67 % | 16.67 % | 319788762 |
32 | NC_014825 | GCTGAA | 2 | 12 | 83693 | 83704 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 319788763 |
33 | NC_014825 | CATCAG | 2 | 12 | 99930 | 99941 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 319788778 |
34 | NC_014825 | GACAGC | 2 | 12 | 113253 | 113264 | 33.33 % | 0 % | 33.33 % | 33.33 % | 319788791 |
35 | NC_014825 | CGACAG | 2 | 12 | 113539 | 113550 | 33.33 % | 0 % | 33.33 % | 33.33 % | 319788792 |
36 | NC_014825 | TTTTGA | 2 | 12 | 118934 | 118945 | 16.67 % | 66.67 % | 16.67 % | 0 % | 319788796 |
37 | NC_014825 | TGATGC | 2 | 12 | 121199 | 121210 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 319788797 |
38 | NC_014825 | ATCCCG | 2 | 12 | 124684 | 124695 | 16.67 % | 16.67 % | 16.67 % | 50 % | 319788802 |
39 | NC_014825 | TCATAC | 2 | 12 | 128430 | 128441 | 33.33 % | 33.33 % | 0 % | 33.33 % | 319788807 |
40 | NC_014825 | GGAGAA | 2 | 12 | 143179 | 143190 | 50 % | 0 % | 50 % | 0 % | 319788825 |
41 | NC_014825 | GGAGCA | 2 | 12 | 146334 | 146345 | 33.33 % | 0 % | 50 % | 16.67 % | 319788828 |
42 | NC_014825 | CCGCTG | 2 | 12 | 148409 | 148420 | 0 % | 16.67 % | 33.33 % | 50 % | 319788829 |
43 | NC_014825 | AACTGA | 2 | 12 | 148773 | 148784 | 50 % | 16.67 % | 16.67 % | 16.67 % | 319788829 |
44 | NC_014825 | ATGGTA | 2 | 12 | 148886 | 148897 | 33.33 % | 33.33 % | 33.33 % | 0 % | 319788829 |
45 | NC_014825 | TGATTT | 2 | 12 | 150132 | 150143 | 16.67 % | 66.67 % | 16.67 % | 0 % | 319788829 |
46 | NC_014825 | GATACT | 2 | 12 | 151585 | 151596 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 319788829 |
47 | NC_014825 | ATACTA | 2 | 12 | 153398 | 153409 | 50 % | 33.33 % | 0 % | 16.67 % | 319788829 |
48 | NC_014825 | TGTTTT | 2 | 12 | 159887 | 159898 | 0 % | 83.33 % | 16.67 % | 0 % | 319788833 |
49 | NC_014825 | TCTCAT | 2 | 12 | 165527 | 165538 | 16.67 % | 50 % | 0 % | 33.33 % | 319788836 |
50 | NC_014825 | TCAAAA | 2 | 12 | 167739 | 167750 | 66.67 % | 16.67 % | 0 % | 16.67 % | 319788838 |
51 | NC_014825 | CTGCCT | 2 | 12 | 173641 | 173652 | 0 % | 33.33 % | 16.67 % | 50 % | 319788843 |
52 | NC_014825 | TTGGAG | 2 | 12 | 181983 | 181994 | 16.67 % | 33.33 % | 50 % | 0 % | 319788850 |
53 | NC_014825 | TCATAA | 2 | 12 | 184022 | 184033 | 50 % | 33.33 % | 0 % | 16.67 % | 319788852 |
54 | NC_014825 | TGTACT | 2 | 12 | 187241 | 187252 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788855 |
55 | NC_014825 | GGATTT | 2 | 12 | 188723 | 188734 | 16.67 % | 50 % | 33.33 % | 0 % | 319788857 |
56 | NC_014825 | TTGCAG | 2 | 12 | 190814 | 190825 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 319788858 |
57 | NC_014825 | CTCATT | 2 | 12 | 190971 | 190982 | 16.67 % | 50 % | 0 % | 33.33 % | 319788858 |
58 | NC_014825 | TATCGC | 2 | 12 | 192382 | 192393 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788860 |
59 | NC_014825 | CAAGGT | 2 | 12 | 193677 | 193688 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 319788863 |
60 | NC_014825 | TAAAAG | 2 | 12 | 196789 | 196800 | 66.67 % | 16.67 % | 16.67 % | 0 % | 319788864 |
61 | NC_014825 | CCGAGC | 2 | 12 | 198120 | 198131 | 16.67 % | 0 % | 33.33 % | 50 % | 319788866 |
62 | NC_014825 | CGTAGC | 2 | 12 | 202342 | 202353 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 319788867 |
63 | NC_014825 | TTCTGT | 2 | 12 | 204125 | 204136 | 0 % | 66.67 % | 16.67 % | 16.67 % | 319788869 |
64 | NC_014825 | GACAGC | 2 | 12 | 207681 | 207692 | 33.33 % | 0 % | 33.33 % | 33.33 % | 319788872 |
65 | NC_014825 | CGTTGC | 2 | 12 | 207853 | 207864 | 0 % | 33.33 % | 33.33 % | 33.33 % | 319788872 |
66 | NC_014825 | TTAGCC | 2 | 12 | 208348 | 208359 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788873 |
67 | NC_014825 | ACATCA | 2 | 12 | 209753 | 209764 | 50 % | 16.67 % | 0 % | 33.33 % | 319788873 |
68 | NC_014825 | TTCGGG | 2 | 12 | 211034 | 211045 | 0 % | 33.33 % | 50 % | 16.67 % | 319788873 |
69 | NC_014825 | GGCTCC | 2 | 12 | 214810 | 214821 | 0 % | 16.67 % | 33.33 % | 50 % | 319788873 |
70 | NC_014825 | CTCGGG | 2 | 12 | 214977 | 214988 | 0 % | 16.67 % | 50 % | 33.33 % | 319788873 |
71 | NC_014825 | CCTGCT | 2 | 12 | 215627 | 215638 | 0 % | 33.33 % | 16.67 % | 50 % | 319788873 |
72 | NC_014825 | CCTCGA | 2 | 12 | 218193 | 218204 | 16.67 % | 16.67 % | 16.67 % | 50 % | 319788875 |
73 | NC_014825 | TCTTGA | 2 | 12 | 225581 | 225592 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788877 |
74 | NC_014825 | TTTCTT | 2 | 12 | 231113 | 231124 | 0 % | 83.33 % | 0 % | 16.67 % | 319788881 |
75 | NC_014825 | GCCTGC | 2 | 12 | 231195 | 231206 | 0 % | 16.67 % | 33.33 % | 50 % | 319788881 |
76 | NC_014825 | GTTTCA | 2 | 12 | 232125 | 232136 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788882 |
77 | NC_014825 | ATGAGA | 2 | 12 | 233473 | 233484 | 50 % | 16.67 % | 33.33 % | 0 % | 319788885 |
78 | NC_014825 | ACCTTG | 2 | 12 | 236287 | 236298 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788887 |
79 | NC_014825 | GTAACA | 2 | 12 | 238011 | 238022 | 50 % | 16.67 % | 16.67 % | 16.67 % | 319788888 |
80 | NC_014825 | CTTTTC | 2 | 12 | 238479 | 238490 | 0 % | 66.67 % | 0 % | 33.33 % | 319788889 |
81 | NC_014825 | TACGGT | 2 | 12 | 240784 | 240795 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 319788892 |
82 | NC_014825 | TAAGAA | 2 | 12 | 243922 | 243933 | 66.67 % | 16.67 % | 16.67 % | 0 % | 319788896 |
83 | NC_014825 | TATCCT | 2 | 12 | 247898 | 247909 | 16.67 % | 50 % | 0 % | 33.33 % | 319788900 |
84 | NC_014825 | TCACCG | 2 | 12 | 249657 | 249668 | 16.67 % | 16.67 % | 16.67 % | 50 % | 319788901 |
85 | NC_014825 | ACCACA | 2 | 12 | 259557 | 259568 | 50 % | 0 % | 0 % | 50 % | 319788906 |
86 | NC_014825 | TGGTGA | 2 | 12 | 259997 | 260008 | 16.67 % | 33.33 % | 50 % | 0 % | 319788906 |
87 | NC_014825 | CGATGC | 2 | 12 | 269500 | 269511 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 319788914 |
88 | NC_014825 | CGATGA | 2 | 12 | 273329 | 273340 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 319788916 |
89 | NC_014825 | CCTGTT | 2 | 12 | 289166 | 289177 | 0 % | 50 % | 16.67 % | 33.33 % | 319788925 |
90 | NC_014825 | TGTACT | 2 | 12 | 289627 | 289638 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788925 |
91 | NC_014825 | CATTAT | 2 | 12 | 289800 | 289811 | 33.33 % | 50 % | 0 % | 16.67 % | 319788925 |
92 | NC_014825 | TGTATC | 2 | 12 | 291115 | 291126 | 16.67 % | 50 % | 16.67 % | 16.67 % | 319788925 |
93 | NC_014825 | ATCACC | 2 | 12 | 293416 | 293427 | 33.33 % | 16.67 % | 0 % | 50 % | 319788927 |
94 | NC_014825 | ACCCAA | 2 | 12 | 293913 | 293924 | 50 % | 0 % | 0 % | 50 % | 319788928 |
95 | NC_014825 | CCCGAA | 2 | 12 | 298339 | 298350 | 33.33 % | 0 % | 16.67 % | 50 % | 319788932 |
96 | NC_014825 | TTTACC | 2 | 12 | 298490 | 298501 | 16.67 % | 50 % | 0 % | 33.33 % | 319788932 |
97 | NC_014825 | GATAAA | 2 | 12 | 300526 | 300537 | 66.67 % | 16.67 % | 16.67 % | 0 % | 319788934 |
98 | NC_014825 | AGATAA | 2 | 12 | 300561 | 300572 | 66.67 % | 16.67 % | 16.67 % | 0 % | 319788934 |
99 | NC_014825 | GATGAG | 2 | 12 | 300580 | 300591 | 33.33 % | 16.67 % | 50 % | 0 % | 319788934 |
100 | NC_014825 | GATAAA | 3 | 18 | 300592 | 300609 | 66.67 % | 16.67 % | 16.67 % | 0 % | 319788934 |
101 | NC_014825 | TGCGGA | 2 | 12 | 304587 | 304598 | 16.67 % | 16.67 % | 50 % | 16.67 % | 319788936 |
102 | NC_014825 | TACCCT | 2 | 12 | 305629 | 305640 | 16.67 % | 33.33 % | 0 % | 50 % | 319788937 |
103 | NC_014825 | TGATAT | 2 | 12 | 305812 | 305823 | 33.33 % | 50 % | 16.67 % | 0 % | 319788937 |
104 | NC_014825 | TGCACC | 2 | 12 | 306338 | 306349 | 16.67 % | 16.67 % | 16.67 % | 50 % | 319788937 |
105 | NC_014825 | TACTCA | 2 | 12 | 311069 | 311080 | 33.33 % | 33.33 % | 0 % | 33.33 % | 319788941 |
106 | NC_014825 | ATACCC | 2 | 12 | 318177 | 318188 | 33.33 % | 16.67 % | 0 % | 50 % | 319788948 |
107 | NC_014825 | CGATAC | 2 | 12 | 321586 | 321597 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 319788951 |
108 | NC_014825 | TACAGG | 2 | 12 | 325566 | 325577 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 319788952 |
109 | NC_014825 | GCCATA | 2 | 12 | 326001 | 326012 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 319788953 |
110 | NC_014825 | GTTGTA | 2 | 12 | 328336 | 328347 | 16.67 % | 50 % | 33.33 % | 0 % | 319788956 |
111 | NC_014825 | TGAACT | 2 | 12 | 328800 | 328811 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 319788956 |
112 | NC_014825 | AAGTAC | 2 | 12 | 330998 | 331009 | 50 % | 16.67 % | 16.67 % | 16.67 % | 319788959 |
113 | NC_014825 | AAGAGA | 2 | 12 | 332119 | 332130 | 66.67 % | 0 % | 33.33 % | 0 % | 319788960 |
114 | NC_014825 | TCAGGC | 2 | 12 | 334404 | 334415 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 319788963 |
115 | NC_014825 | ACCTTG | 2 | 12 | 336710 | 336721 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788965 |
116 | NC_014825 | CTGATC | 2 | 12 | 338925 | 338936 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 319788968 |
117 | NC_014825 | ATAACT | 2 | 12 | 350659 | 350670 | 50 % | 33.33 % | 0 % | 16.67 % | 319788980 |