Tri-nucleotide Coding Repeats of Chlamydophila psittaci RD1 plasmid pRD1
Total Repeats: 88
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014797 | CAC | 3 | 9 | 165 | 173 | 33.33 % | 0 % | 0 % | 66.67 % | 409191176 |
2 | NC_014797 | ATT | 2 | 6 | 182 | 187 | 33.33 % | 66.67 % | 0 % | 0 % | 409191176 |
3 | NC_014797 | AGC | 2 | 6 | 203 | 208 | 33.33 % | 0 % | 33.33 % | 33.33 % | 409191176 |
4 | NC_014797 | TAG | 2 | 6 | 274 | 279 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191176 |
5 | NC_014797 | TGT | 2 | 6 | 324 | 329 | 0 % | 66.67 % | 33.33 % | 0 % | 409191176 |
6 | NC_014797 | AGC | 2 | 6 | 416 | 421 | 33.33 % | 0 % | 33.33 % | 33.33 % | 409191176 |
7 | NC_014797 | TTA | 2 | 6 | 469 | 474 | 33.33 % | 66.67 % | 0 % | 0 % | 409191176 |
8 | NC_014797 | GTT | 2 | 6 | 566 | 571 | 0 % | 66.67 % | 33.33 % | 0 % | 409191176 |
9 | NC_014797 | ACA | 2 | 6 | 833 | 838 | 66.67 % | 0 % | 0 % | 33.33 % | 409191176 |
10 | NC_014797 | TAT | 3 | 9 | 858 | 866 | 33.33 % | 66.67 % | 0 % | 0 % | 409191176 |
11 | NC_014797 | TCT | 2 | 6 | 996 | 1001 | 0 % | 66.67 % | 0 % | 33.33 % | 409191176 |
12 | NC_014797 | TAG | 2 | 6 | 1195 | 1200 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191177 |
13 | NC_014797 | TAA | 2 | 6 | 1477 | 1482 | 66.67 % | 33.33 % | 0 % | 0 % | 409191177 |
14 | NC_014797 | TTG | 2 | 6 | 1483 | 1488 | 0 % | 66.67 % | 33.33 % | 0 % | 409191177 |
15 | NC_014797 | TGT | 2 | 6 | 1556 | 1561 | 0 % | 66.67 % | 33.33 % | 0 % | 409191177 |
16 | NC_014797 | GAA | 2 | 6 | 1597 | 1602 | 66.67 % | 0 % | 33.33 % | 0 % | 409191177 |
17 | NC_014797 | ATA | 2 | 6 | 1657 | 1662 | 66.67 % | 33.33 % | 0 % | 0 % | 409191177 |
18 | NC_014797 | TGA | 2 | 6 | 1734 | 1739 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191177 |
19 | NC_014797 | ATT | 2 | 6 | 1758 | 1763 | 33.33 % | 66.67 % | 0 % | 0 % | 409191177 |
20 | NC_014797 | TGC | 2 | 6 | 1808 | 1813 | 0 % | 33.33 % | 33.33 % | 33.33 % | 409191177 |
21 | NC_014797 | TGT | 2 | 6 | 1885 | 1890 | 0 % | 66.67 % | 33.33 % | 0 % | 409191177 |
22 | NC_014797 | AGA | 2 | 6 | 1997 | 2002 | 66.67 % | 0 % | 33.33 % | 0 % | 409191177 |
23 | NC_014797 | GTT | 2 | 6 | 2096 | 2101 | 0 % | 66.67 % | 33.33 % | 0 % | 409191177 |
24 | NC_014797 | GAA | 3 | 9 | 2283 | 2291 | 66.67 % | 0 % | 33.33 % | 0 % | 409191178 |
25 | NC_014797 | ATT | 2 | 6 | 2338 | 2343 | 33.33 % | 66.67 % | 0 % | 0 % | 409191178 |
26 | NC_014797 | TGT | 3 | 9 | 2357 | 2365 | 0 % | 66.67 % | 33.33 % | 0 % | 409191178 |
27 | NC_014797 | CAC | 2 | 6 | 2382 | 2387 | 33.33 % | 0 % | 0 % | 66.67 % | 409191178 |
28 | NC_014797 | AGA | 2 | 6 | 2487 | 2492 | 66.67 % | 0 % | 33.33 % | 0 % | 409191178 |
29 | NC_014797 | ATC | 2 | 6 | 2566 | 2571 | 33.33 % | 33.33 % | 0 % | 33.33 % | 409191178 |
30 | NC_014797 | TTC | 2 | 6 | 2882 | 2887 | 0 % | 66.67 % | 0 % | 33.33 % | 409191178 |
31 | NC_014797 | TGT | 2 | 6 | 2927 | 2932 | 0 % | 66.67 % | 33.33 % | 0 % | 409191178 |
32 | NC_014797 | TGC | 2 | 6 | 2936 | 2941 | 0 % | 33.33 % | 33.33 % | 33.33 % | 409191178 |
33 | NC_014797 | CTT | 2 | 6 | 3085 | 3090 | 0 % | 66.67 % | 0 % | 33.33 % | 409191178 |
34 | NC_014797 | AGA | 2 | 6 | 3410 | 3415 | 66.67 % | 0 % | 33.33 % | 0 % | 409191178 |
35 | NC_014797 | TGT | 2 | 6 | 3436 | 3441 | 0 % | 66.67 % | 33.33 % | 0 % | 409191178 |
36 | NC_014797 | TAT | 2 | 6 | 3510 | 3515 | 33.33 % | 66.67 % | 0 % | 0 % | 409191178 |
37 | NC_014797 | TAG | 2 | 6 | 3550 | 3555 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191178 |
38 | NC_014797 | CAA | 2 | 6 | 3583 | 3588 | 66.67 % | 0 % | 0 % | 33.33 % | 409191178 |
39 | NC_014797 | AAG | 2 | 6 | 3631 | 3636 | 66.67 % | 0 % | 33.33 % | 0 % | 409191178 |
40 | NC_014797 | AGA | 2 | 6 | 3718 | 3723 | 66.67 % | 0 % | 33.33 % | 0 % | 409191179 |
41 | NC_014797 | AGC | 2 | 6 | 3811 | 3816 | 33.33 % | 0 % | 33.33 % | 33.33 % | 409191179 |
42 | NC_014797 | CAA | 2 | 6 | 3837 | 3842 | 66.67 % | 0 % | 0 % | 33.33 % | 409191179 |
43 | NC_014797 | AAG | 2 | 6 | 4005 | 4010 | 66.67 % | 0 % | 33.33 % | 0 % | 409191179 |
44 | NC_014797 | GAA | 2 | 6 | 4094 | 4099 | 66.67 % | 0 % | 33.33 % | 0 % | 409191179 |
45 | NC_014797 | GAA | 2 | 6 | 4190 | 4195 | 66.67 % | 0 % | 33.33 % | 0 % | 409191179 |
46 | NC_014797 | TCA | 2 | 6 | 4233 | 4238 | 33.33 % | 33.33 % | 0 % | 33.33 % | 409191179 |
47 | NC_014797 | TAG | 2 | 6 | 4257 | 4262 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191179 |
48 | NC_014797 | CAA | 2 | 6 | 4641 | 4646 | 66.67 % | 0 % | 0 % | 33.33 % | 409191179 |
49 | NC_014797 | CAA | 2 | 6 | 4665 | 4670 | 66.67 % | 0 % | 0 % | 33.33 % | 409191179 |
50 | NC_014797 | CAA | 2 | 6 | 4830 | 4835 | 66.67 % | 0 % | 0 % | 33.33 % | 409191180 |
51 | NC_014797 | CAG | 2 | 6 | 4864 | 4869 | 33.33 % | 0 % | 33.33 % | 33.33 % | 409191180 |
52 | NC_014797 | CCA | 2 | 6 | 4930 | 4935 | 33.33 % | 0 % | 0 % | 66.67 % | 409191180 |
53 | NC_014797 | AAG | 2 | 6 | 5041 | 5046 | 66.67 % | 0 % | 33.33 % | 0 % | 409191180 |
54 | NC_014797 | AAT | 2 | 6 | 5057 | 5062 | 66.67 % | 33.33 % | 0 % | 0 % | 409191180 |
55 | NC_014797 | CTG | 2 | 6 | 5233 | 5238 | 0 % | 33.33 % | 33.33 % | 33.33 % | 409191180 |
56 | NC_014797 | CAT | 2 | 6 | 5240 | 5245 | 33.33 % | 33.33 % | 0 % | 33.33 % | 409191180 |
57 | NC_014797 | TCA | 2 | 6 | 5328 | 5333 | 33.33 % | 33.33 % | 0 % | 33.33 % | 409191180 |
58 | NC_014797 | ACA | 2 | 6 | 5371 | 5376 | 66.67 % | 0 % | 0 % | 33.33 % | 409191180 |
59 | NC_014797 | TGG | 2 | 6 | 5411 | 5416 | 0 % | 33.33 % | 66.67 % | 0 % | 409191180 |
60 | NC_014797 | GTG | 2 | 6 | 5425 | 5430 | 0 % | 33.33 % | 66.67 % | 0 % | 409191180 |
61 | NC_014797 | ACA | 2 | 6 | 5513 | 5518 | 66.67 % | 0 % | 0 % | 33.33 % | 409191180 |
62 | NC_014797 | TAA | 2 | 6 | 5529 | 5534 | 66.67 % | 33.33 % | 0 % | 0 % | 409191180 |
63 | NC_014797 | ATA | 2 | 6 | 5858 | 5863 | 66.67 % | 33.33 % | 0 % | 0 % | 409191181 |
64 | NC_014797 | GGT | 2 | 6 | 5995 | 6000 | 0 % | 33.33 % | 66.67 % | 0 % | 409191182 |
65 | NC_014797 | AAC | 2 | 6 | 6009 | 6014 | 66.67 % | 0 % | 0 % | 33.33 % | 409191182 |
66 | NC_014797 | GTA | 2 | 6 | 6032 | 6037 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191182 |
67 | NC_014797 | GAT | 2 | 6 | 6127 | 6132 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191182 |
68 | NC_014797 | AGA | 2 | 6 | 6172 | 6177 | 66.67 % | 0 % | 33.33 % | 0 % | 409191182 |
69 | NC_014797 | AGA | 2 | 6 | 6234 | 6239 | 66.67 % | 0 % | 33.33 % | 0 % | 409191182 |
70 | NC_014797 | ATG | 2 | 6 | 6317 | 6322 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191182 |
71 | NC_014797 | CCT | 2 | 6 | 6340 | 6345 | 0 % | 33.33 % | 0 % | 66.67 % | 409191182 |
72 | NC_014797 | AAG | 2 | 6 | 6365 | 6370 | 66.67 % | 0 % | 33.33 % | 0 % | 409191182 |
73 | NC_014797 | CAA | 2 | 6 | 6458 | 6463 | 66.67 % | 0 % | 0 % | 33.33 % | 409191182 |
74 | NC_014797 | CAA | 2 | 6 | 6521 | 6526 | 66.67 % | 0 % | 0 % | 33.33 % | 409191182 |
75 | NC_014797 | CAG | 2 | 6 | 6606 | 6611 | 33.33 % | 0 % | 33.33 % | 33.33 % | 409191182 |
76 | NC_014797 | TTA | 2 | 6 | 6616 | 6621 | 33.33 % | 66.67 % | 0 % | 0 % | 409191182 |
77 | NC_014797 | ATC | 2 | 6 | 6627 | 6632 | 33.33 % | 33.33 % | 0 % | 33.33 % | 409191182 |
78 | NC_014797 | TAA | 2 | 6 | 6635 | 6640 | 66.67 % | 33.33 % | 0 % | 0 % | 409191182 |
79 | NC_014797 | AGC | 2 | 6 | 6660 | 6665 | 33.33 % | 0 % | 33.33 % | 33.33 % | 409191182 |
80 | NC_014797 | TGA | 2 | 6 | 6714 | 6719 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191182 |
81 | NC_014797 | AAG | 2 | 6 | 6757 | 6762 | 66.67 % | 0 % | 33.33 % | 0 % | 409191183 |
82 | NC_014797 | TAG | 2 | 6 | 6883 | 6888 | 33.33 % | 33.33 % | 33.33 % | 0 % | 409191183 |
83 | NC_014797 | GAA | 2 | 6 | 6912 | 6917 | 66.67 % | 0 % | 33.33 % | 0 % | 409191183 |
84 | NC_014797 | ACA | 2 | 6 | 6977 | 6982 | 66.67 % | 0 % | 0 % | 33.33 % | 409191183 |
85 | NC_014797 | ACA | 2 | 6 | 7050 | 7055 | 66.67 % | 0 % | 0 % | 33.33 % | 409191183 |
86 | NC_014797 | CCT | 2 | 6 | 7299 | 7304 | 0 % | 33.33 % | 0 % | 66.67 % | 409191183 |
87 | NC_014797 | TCT | 2 | 6 | 7311 | 7316 | 0 % | 66.67 % | 0 % | 33.33 % | 409191183 |
88 | NC_014797 | TCT | 2 | 6 | 7395 | 7400 | 0 % | 66.67 % | 0 % | 33.33 % | 409191183 |