Hexa-nucleotide Non-Coding Repeats of Halogeometricum borinquense DSM 11551 chromosome
Total Repeats: 100
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014729 | CACTTT | 2 | 12 | 36749 | 36760 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
2 | NC_014729 | ACGCGC | 2 | 12 | 40900 | 40911 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
3 | NC_014729 | TGAAAG | 2 | 12 | 91495 | 91506 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
4 | NC_014729 | TTCGTG | 2 | 12 | 102958 | 102969 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
5 | NC_014729 | CGCGAA | 2 | 12 | 121864 | 121875 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
6 | NC_014729 | GTGTTT | 2 | 12 | 168049 | 168060 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
7 | NC_014729 | CGTCGG | 2 | 12 | 188711 | 188722 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
8 | NC_014729 | CCGAAT | 2 | 12 | 189919 | 189930 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
9 | NC_014729 | ACAATA | 9 | 54 | 190758 | 190811 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
10 | NC_014729 | GTTCGA | 2 | 12 | 192774 | 192785 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
11 | NC_014729 | GTTCGA | 2 | 12 | 192798 | 192809 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
12 | NC_014729 | GTTCGA | 2 | 12 | 192822 | 192833 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
13 | NC_014729 | ACCGTA | 2 | 12 | 227104 | 227115 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
14 | NC_014729 | CCGAAC | 2 | 12 | 243699 | 243710 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
15 | NC_014729 | CTCTCG | 2 | 12 | 281943 | 281954 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
16 | NC_014729 | TCACAC | 2 | 12 | 284391 | 284402 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
17 | NC_014729 | TGCGGC | 2 | 12 | 302945 | 302956 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
18 | NC_014729 | ACTCAA | 2 | 12 | 304392 | 304403 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
19 | NC_014729 | AGGAAC | 2 | 12 | 304786 | 304797 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
20 | NC_014729 | TGACGC | 2 | 12 | 306996 | 307007 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
21 | NC_014729 | TCAGTG | 2 | 12 | 345381 | 345392 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
22 | NC_014729 | CTTCGA | 2 | 12 | 357265 | 357276 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
23 | NC_014729 | GGACGC | 2 | 12 | 385748 | 385759 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
24 | NC_014729 | CCCGAC | 2 | 12 | 389846 | 389857 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
25 | NC_014729 | ATGTCG | 2 | 12 | 403663 | 403674 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
26 | NC_014729 | TATTGA | 2 | 12 | 411914 | 411925 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
27 | NC_014729 | AAACGC | 2 | 12 | 442812 | 442823 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |
28 | NC_014729 | TGCGAT | 2 | 12 | 443556 | 443567 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
29 | NC_014729 | TGCGAT | 2 | 12 | 444043 | 444054 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
30 | NC_014729 | GCTGTC | 2 | 12 | 482609 | 482620 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
31 | NC_014729 | AACGAC | 2 | 12 | 523707 | 523718 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |
32 | NC_014729 | AGTGAA | 2 | 12 | 572178 | 572189 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
33 | NC_014729 | TATTCT | 2 | 12 | 644886 | 644897 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
34 | NC_014729 | GTTCTC | 2 | 12 | 689313 | 689324 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
35 | NC_014729 | AAATAT | 2 | 12 | 824252 | 824263 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
36 | NC_014729 | CGATCT | 2 | 12 | 828214 | 828225 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
37 | NC_014729 | CACTGT | 2 | 12 | 903939 | 903950 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
38 | NC_014729 | TCACAC | 2 | 12 | 977822 | 977833 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
39 | NC_014729 | TTCCGC | 2 | 12 | 1002506 | 1002517 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
40 | NC_014729 | CAACGA | 2 | 12 | 1050744 | 1050755 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |
41 | NC_014729 | CCATAA | 2 | 12 | 1069806 | 1069817 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
42 | NC_014729 | GCGGAC | 2 | 12 | 1092902 | 1092913 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
43 | NC_014729 | TTTCAC | 2 | 12 | 1164894 | 1164905 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
44 | NC_014729 | GTCAAC | 2 | 12 | 1230006 | 1230017 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
45 | NC_014729 | GACGGT | 2 | 12 | 1244865 | 1244876 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
46 | NC_014729 | AATTCT | 2 | 12 | 1257795 | 1257806 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
47 | NC_014729 | ACGATT | 2 | 12 | 1279040 | 1279051 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
48 | NC_014729 | ACTCGG | 2 | 12 | 1282126 | 1282137 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
49 | NC_014729 | CGAGAG | 2 | 12 | 1293486 | 1293497 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
50 | NC_014729 | TACCCG | 2 | 12 | 1318343 | 1318354 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
51 | NC_014729 | GCTACC | 2 | 12 | 1361681 | 1361692 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
52 | NC_014729 | TGTTCC | 2 | 12 | 1377494 | 1377505 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
53 | NC_014729 | TTGAGT | 2 | 12 | 1377889 | 1377900 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
54 | NC_014729 | GCCGCA | 2 | 12 | 1379336 | 1379347 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
55 | NC_014729 | CCGAGT | 2 | 12 | 1403445 | 1403456 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
56 | NC_014729 | CGAGGG | 2 | 12 | 1414842 | 1414853 | 16.67 % | 0 % | 66.67 % | 16.67 % | Non-Coding |
57 | NC_014729 | TCGGGT | 2 | 12 | 1415234 | 1415245 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
58 | NC_014729 | AAAGAC | 2 | 12 | 1416225 | 1416236 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
59 | NC_014729 | GTTGTG | 2 | 12 | 1423151 | 1423162 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
60 | NC_014729 | TTCGAG | 2 | 12 | 1462201 | 1462212 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
61 | NC_014729 | AGGGCG | 2 | 12 | 1515897 | 1515908 | 16.67 % | 0 % | 66.67 % | 16.67 % | Non-Coding |
62 | NC_014729 | TCTCTG | 2 | 12 | 1543347 | 1543358 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
63 | NC_014729 | TTCCTG | 4 | 24 | 1543359 | 1543382 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
64 | NC_014729 | TGACGT | 2 | 12 | 1570629 | 1570640 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
65 | NC_014729 | CGTTGT | 2 | 12 | 1570650 | 1570661 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
66 | NC_014729 | GAACGG | 2 | 12 | 1709233 | 1709244 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
67 | NC_014729 | TCGCTG | 2 | 12 | 1770380 | 1770391 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
68 | NC_014729 | GTGTCG | 2 | 12 | 1835956 | 1835967 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
69 | NC_014729 | GGTGTA | 2 | 12 | 1869965 | 1869976 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
70 | NC_014729 | ACCGCA | 2 | 12 | 1917933 | 1917944 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
71 | NC_014729 | ACCGCA | 2 | 12 | 1917954 | 1917965 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
72 | NC_014729 | AGTTAG | 2 | 12 | 1927986 | 1927997 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
73 | NC_014729 | CCGTTC | 2 | 12 | 1928223 | 1928234 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
74 | NC_014729 | AATGTG | 2 | 12 | 1946939 | 1946950 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
75 | NC_014729 | ATATAA | 2 | 12 | 1978631 | 1978642 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
76 | NC_014729 | TTTCAT | 2 | 12 | 1986659 | 1986670 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
77 | NC_014729 | CGCGGA | 2 | 12 | 2009091 | 2009102 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
78 | NC_014729 | GGATTC | 2 | 12 | 2087821 | 2087832 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
79 | NC_014729 | CCGACC | 2 | 12 | 2177633 | 2177644 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
80 | NC_014729 | AACGCG | 2 | 12 | 2200910 | 2200921 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
81 | NC_014729 | GCGAAC | 2 | 12 | 2214120 | 2214131 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
82 | NC_014729 | GAAAAC | 2 | 12 | 2317951 | 2317962 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
83 | NC_014729 | CCGTGT | 2 | 12 | 2343829 | 2343840 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
84 | NC_014729 | ATTACG | 2 | 12 | 2347090 | 2347101 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
85 | NC_014729 | CGGACG | 2 | 12 | 2387668 | 2387679 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
86 | NC_014729 | GAGAAA | 2 | 12 | 2390040 | 2390051 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
87 | NC_014729 | GACGGG | 2 | 12 | 2441033 | 2441044 | 16.67 % | 0 % | 66.67 % | 16.67 % | Non-Coding |
88 | NC_014729 | TTTCGA | 2 | 12 | 2458073 | 2458084 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
89 | NC_014729 | AGTGAA | 2 | 12 | 2505268 | 2505279 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
90 | NC_014729 | AGTCGG | 2 | 12 | 2513189 | 2513200 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
91 | NC_014729 | ACTCGC | 2 | 12 | 2590778 | 2590789 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
92 | NC_014729 | AGTGAA | 2 | 12 | 2605810 | 2605821 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
93 | NC_014729 | CGAATT | 2 | 12 | 2626010 | 2626021 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
94 | NC_014729 | ACGGCG | 2 | 12 | 2630132 | 2630143 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
95 | NC_014729 | TCACCG | 2 | 12 | 2712518 | 2712529 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
96 | NC_014729 | CCTGCA | 2 | 12 | 2717123 | 2717134 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
97 | NC_014729 | AGACAT | 2 | 12 | 2739534 | 2739545 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
98 | NC_014729 | CCCTCC | 2 | 12 | 2777574 | 2777585 | 0 % | 16.67 % | 0 % | 83.33 % | Non-Coding |
99 | NC_014729 | TTCACT | 2 | 12 | 2786639 | 2786650 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
100 | NC_014729 | TAACTA | 2 | 12 | 2791564 | 2791575 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |