Tetra-nucleotide Repeats of Caldicellulosiruptor kristjanssonii 177R1B plasmid pCALKR01
Total Repeats: 42
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014719 | AACT | 2 | 8 | 185 | 192 | 50 % | 25 % | 0 % | 25 % | 312281361 |
2 | NC_014719 | AAAT | 2 | 8 | 363 | 370 | 75 % | 25 % | 0 % | 0 % | 312281361 |
3 | NC_014719 | GGTA | 2 | 8 | 936 | 943 | 25 % | 25 % | 50 % | 0 % | 312281361 |
4 | NC_014719 | TGCT | 2 | 8 | 1808 | 1815 | 0 % | 50 % | 25 % | 25 % | 312281363 |
5 | NC_014719 | TTGG | 2 | 8 | 2318 | 2325 | 0 % | 50 % | 50 % | 0 % | 312281363 |
6 | NC_014719 | AATA | 2 | 8 | 2436 | 2443 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
7 | NC_014719 | TAAA | 2 | 8 | 2504 | 2511 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
8 | NC_014719 | AAGA | 2 | 8 | 3053 | 3060 | 75 % | 0 % | 25 % | 0 % | 312281365 |
9 | NC_014719 | TTTG | 2 | 8 | 3157 | 3164 | 0 % | 75 % | 25 % | 0 % | 312281365 |
10 | NC_014719 | GATG | 2 | 8 | 3193 | 3200 | 25 % | 25 % | 50 % | 0 % | 312281365 |
11 | NC_014719 | GGCA | 2 | 8 | 3744 | 3751 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
12 | NC_014719 | AATG | 2 | 8 | 3861 | 3868 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
13 | NC_014719 | ATTT | 2 | 8 | 4163 | 4170 | 25 % | 75 % | 0 % | 0 % | 312281366 |
14 | NC_014719 | TGAA | 2 | 8 | 4812 | 4819 | 50 % | 25 % | 25 % | 0 % | 312281367 |
15 | NC_014719 | TTGT | 2 | 8 | 4896 | 4903 | 0 % | 75 % | 25 % | 0 % | 312281367 |
16 | NC_014719 | GTTT | 2 | 8 | 4924 | 4931 | 0 % | 75 % | 25 % | 0 % | 312281367 |
17 | NC_014719 | GTTT | 2 | 8 | 5125 | 5132 | 0 % | 75 % | 25 % | 0 % | 312281368 |
18 | NC_014719 | CAAA | 2 | 8 | 5738 | 5745 | 75 % | 0 % | 0 % | 25 % | 312281368 |
19 | NC_014719 | TCAA | 2 | 8 | 6595 | 6602 | 50 % | 25 % | 0 % | 25 % | 312281369 |
20 | NC_014719 | AAAG | 2 | 8 | 7913 | 7920 | 75 % | 0 % | 25 % | 0 % | 312281371 |
21 | NC_014719 | TTAC | 2 | 8 | 8045 | 8052 | 25 % | 50 % | 0 % | 25 % | 312281371 |
22 | NC_014719 | AAAT | 2 | 8 | 8329 | 8336 | 75 % | 25 % | 0 % | 0 % | 312281371 |
23 | NC_014719 | TCAA | 2 | 8 | 9090 | 9097 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
24 | NC_014719 | TGTT | 2 | 8 | 9273 | 9280 | 0 % | 75 % | 25 % | 0 % | 312281372 |
25 | NC_014719 | CTTT | 2 | 8 | 9311 | 9318 | 0 % | 75 % | 0 % | 25 % | 312281372 |
26 | NC_014719 | CAAC | 2 | 8 | 9591 | 9598 | 50 % | 0 % | 0 % | 50 % | 312281372 |
27 | NC_014719 | ACAA | 2 | 8 | 10081 | 10088 | 75 % | 0 % | 0 % | 25 % | 312281372 |
28 | NC_014719 | TTTA | 2 | 8 | 11054 | 11061 | 25 % | 75 % | 0 % | 0 % | 312281374 |
29 | NC_014719 | TCAA | 2 | 8 | 11346 | 11353 | 50 % | 25 % | 0 % | 25 % | 312281374 |
30 | NC_014719 | TGAT | 2 | 8 | 11385 | 11392 | 25 % | 50 % | 25 % | 0 % | 312281374 |
31 | NC_014719 | CAGC | 2 | 8 | 11470 | 11477 | 25 % | 0 % | 25 % | 50 % | 312281374 |
32 | NC_014719 | TTTC | 2 | 8 | 11794 | 11801 | 0 % | 75 % | 0 % | 25 % | 312281374 |
33 | NC_014719 | GTTA | 2 | 8 | 11809 | 11816 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
34 | NC_014719 | TAAA | 2 | 8 | 12159 | 12166 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
35 | NC_014719 | CCTT | 2 | 8 | 12308 | 12315 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
36 | NC_014719 | AGTT | 2 | 8 | 13070 | 13077 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
37 | NC_014719 | TGTA | 2 | 8 | 13744 | 13751 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
38 | NC_014719 | CAGT | 2 | 8 | 14484 | 14491 | 25 % | 25 % | 25 % | 25 % | 312281376 |
39 | NC_014719 | AAAC | 2 | 8 | 14584 | 14591 | 75 % | 0 % | 0 % | 25 % | 312281376 |
40 | NC_014719 | ACTG | 2 | 8 | 14924 | 14931 | 25 % | 25 % | 25 % | 25 % | 312281377 |
41 | NC_014719 | AGTA | 3 | 12 | 15319 | 15330 | 50 % | 25 % | 25 % | 0 % | 312281377 |
42 | NC_014719 | TTTA | 2 | 8 | 15458 | 15465 | 25 % | 75 % | 0 % | 0 % | Non-Coding |