Penta-nucleotide Repeats of Thiomonas intermedia K12 plasmid pTINT01
Total Repeats: 29
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014154 | TATCA | 2 | 10 | 700 | 709 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
2 | NC_014154 | CGCAG | 2 | 10 | 1576 | 1585 | 20 % | 0 % | 40 % | 40 % | 296137613 |
3 | NC_014154 | ACCGC | 2 | 10 | 5025 | 5034 | 20 % | 0 % | 20 % | 60 % | 296137620 |
4 | NC_014154 | GCGAG | 2 | 10 | 5794 | 5803 | 20 % | 0 % | 60 % | 20 % | 296137620 |
5 | NC_014154 | GGCGC | 2 | 10 | 6259 | 6268 | 0 % | 0 % | 60 % | 40 % | 296137620 |
6 | NC_014154 | CCCCA | 2 | 10 | 6929 | 6938 | 20 % | 0 % | 0 % | 80 % | 296137620 |
7 | NC_014154 | GGCGC | 2 | 10 | 9513 | 9522 | 0 % | 0 % | 60 % | 40 % | 296137622 |
8 | NC_014154 | GCGTT | 2 | 10 | 12005 | 12014 | 0 % | 40 % | 40 % | 20 % | 296137625 |
9 | NC_014154 | TTTGC | 2 | 10 | 17052 | 17061 | 0 % | 60 % | 20 % | 20 % | 296137628 |
10 | NC_014154 | TTGCG | 2 | 10 | 17136 | 17145 | 0 % | 40 % | 40 % | 20 % | 296137628 |
11 | NC_014154 | CCAGC | 2 | 10 | 17838 | 17847 | 20 % | 0 % | 20 % | 60 % | 296137628 |
12 | NC_014154 | TGTGG | 2 | 10 | 18935 | 18944 | 0 % | 40 % | 60 % | 0 % | 296137630 |
13 | NC_014154 | CGCTG | 2 | 10 | 21385 | 21394 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
14 | NC_014154 | GTCAC | 2 | 10 | 23590 | 23599 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
15 | NC_014154 | GCACA | 2 | 10 | 24245 | 24254 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
16 | NC_014154 | TCGAT | 2 | 10 | 25367 | 25376 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
17 | NC_014154 | GGTCA | 2 | 10 | 26069 | 26078 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
18 | NC_014154 | GATCG | 2 | 10 | 29213 | 29222 | 20 % | 20 % | 40 % | 20 % | 296137633 |
19 | NC_014154 | TGCCC | 2 | 10 | 29465 | 29474 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
20 | NC_014154 | TGGCT | 2 | 10 | 31004 | 31013 | 0 % | 40 % | 40 % | 20 % | 296137637 |
21 | NC_014154 | GGCCG | 2 | 10 | 31070 | 31079 | 0 % | 0 % | 60 % | 40 % | 296137637 |
22 | NC_014154 | GATCC | 2 | 10 | 31277 | 31286 | 20 % | 20 % | 20 % | 40 % | 296137637 |
23 | NC_014154 | GCCGG | 2 | 10 | 35222 | 35231 | 0 % | 0 % | 60 % | 40 % | 296137643 |
24 | NC_014154 | TGCGC | 2 | 10 | 36085 | 36094 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
25 | NC_014154 | CCTGC | 2 | 10 | 36844 | 36853 | 0 % | 20 % | 20 % | 60 % | 296137647 |
26 | NC_014154 | GCAGC | 2 | 10 | 38269 | 38278 | 20 % | 0 % | 40 % | 40 % | 296137647 |
27 | NC_014154 | CCATC | 2 | 10 | 42923 | 42932 | 20 % | 20 % | 0 % | 60 % | 296137652 |
28 | NC_014154 | GACGC | 2 | 10 | 43799 | 43808 | 20 % | 0 % | 40 % | 40 % | 296137652 |
29 | NC_014154 | ACGCT | 2 | 10 | 44084 | 44093 | 20 % | 20 % | 20 % | 40 % | 296137653 |