Tetra-nucleotide Repeats of Thiomonas sp. str. 3As plasmid pTHI
Total Repeats: 119
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014144 | CCCG | 2 | 8 | 366 | 373 | 0 % | 0 % | 25 % | 75 % | 296112159 |
2 | NC_014144 | CTGG | 2 | 8 | 675 | 682 | 0 % | 25 % | 50 % | 25 % | 296112159 |
3 | NC_014144 | GCGG | 2 | 8 | 1087 | 1094 | 0 % | 0 % | 75 % | 25 % | 296112160 |
4 | NC_014144 | GGGC | 2 | 8 | 2343 | 2350 | 0 % | 0 % | 75 % | 25 % | 296112162 |
5 | NC_014144 | CCGA | 2 | 8 | 2596 | 2603 | 25 % | 0 % | 25 % | 50 % | 296112163 |
6 | NC_014144 | TCAA | 2 | 8 | 2959 | 2966 | 50 % | 25 % | 0 % | 25 % | 296112163 |
7 | NC_014144 | TGGC | 2 | 8 | 2985 | 2992 | 0 % | 25 % | 50 % | 25 % | 296112163 |
8 | NC_014144 | GCGA | 2 | 8 | 3448 | 3455 | 25 % | 0 % | 50 % | 25 % | 296112163 |
9 | NC_014144 | ATTC | 2 | 8 | 3705 | 3712 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
10 | NC_014144 | AAAG | 2 | 8 | 3934 | 3941 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
11 | NC_014144 | GTTC | 2 | 8 | 4316 | 4323 | 0 % | 50 % | 25 % | 25 % | 296112165 |
12 | NC_014144 | CCAG | 2 | 8 | 4510 | 4517 | 25 % | 0 % | 25 % | 50 % | 296112165 |
13 | NC_014144 | TGCC | 2 | 8 | 5909 | 5916 | 0 % | 25 % | 25 % | 50 % | 296112169 |
14 | NC_014144 | GTTC | 2 | 8 | 5986 | 5993 | 0 % | 50 % | 25 % | 25 % | 296112169 |
15 | NC_014144 | ATGG | 2 | 8 | 6441 | 6448 | 25 % | 25 % | 50 % | 0 % | 296112170 |
16 | NC_014144 | GAGC | 2 | 8 | 6555 | 6562 | 25 % | 0 % | 50 % | 25 % | 296112170 |
17 | NC_014144 | AGCG | 2 | 8 | 7525 | 7532 | 25 % | 0 % | 50 % | 25 % | 296112170 |
18 | NC_014144 | GAGC | 2 | 8 | 8064 | 8071 | 25 % | 0 % | 50 % | 25 % | 296112170 |
19 | NC_014144 | CTTC | 2 | 8 | 8090 | 8097 | 0 % | 50 % | 0 % | 50 % | 296112170 |
20 | NC_014144 | CCAG | 2 | 8 | 8396 | 8403 | 25 % | 0 % | 25 % | 50 % | 296112170 |
21 | NC_014144 | GACC | 2 | 8 | 8567 | 8574 | 25 % | 0 % | 25 % | 50 % | 296112170 |
22 | NC_014144 | AGCC | 2 | 8 | 8575 | 8582 | 25 % | 0 % | 25 % | 50 % | 296112170 |
23 | NC_014144 | CGGT | 2 | 8 | 8611 | 8618 | 0 % | 25 % | 50 % | 25 % | 296112170 |
24 | NC_014144 | GCTC | 2 | 8 | 8732 | 8739 | 0 % | 25 % | 25 % | 50 % | 296112170 |
25 | NC_014144 | GGTC | 2 | 8 | 9490 | 9497 | 0 % | 25 % | 50 % | 25 % | 296112172 |
26 | NC_014144 | CTCG | 2 | 8 | 10227 | 10234 | 0 % | 25 % | 25 % | 50 % | 296112173 |
27 | NC_014144 | CTAC | 2 | 8 | 10443 | 10450 | 25 % | 25 % | 0 % | 50 % | 296112173 |
28 | NC_014144 | GCCA | 2 | 8 | 10496 | 10503 | 25 % | 0 % | 25 % | 50 % | 296112173 |
29 | NC_014144 | ATGG | 2 | 8 | 10795 | 10802 | 25 % | 25 % | 50 % | 0 % | 296112173 |
30 | NC_014144 | TGGC | 2 | 8 | 11087 | 11094 | 0 % | 25 % | 50 % | 25 % | 296112174 |
31 | NC_014144 | GGGC | 2 | 8 | 11348 | 11355 | 0 % | 0 % | 75 % | 25 % | 296112174 |
32 | NC_014144 | TGAT | 2 | 8 | 12219 | 12226 | 25 % | 50 % | 25 % | 0 % | 296112176 |
33 | NC_014144 | GCTG | 2 | 8 | 12268 | 12275 | 0 % | 25 % | 50 % | 25 % | 296112177 |
34 | NC_014144 | TGGC | 2 | 8 | 12780 | 12787 | 0 % | 25 % | 50 % | 25 % | 296112178 |
35 | NC_014144 | GAGT | 2 | 8 | 13178 | 13185 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
36 | NC_014144 | CGGG | 2 | 8 | 13457 | 13464 | 0 % | 0 % | 75 % | 25 % | 296112180 |
37 | NC_014144 | GGGC | 2 | 8 | 13785 | 13792 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
38 | NC_014144 | GCCC | 2 | 8 | 13961 | 13968 | 0 % | 0 % | 25 % | 75 % | 296112181 |
39 | NC_014144 | CCCA | 2 | 8 | 14088 | 14095 | 25 % | 0 % | 0 % | 75 % | 296112181 |
40 | NC_014144 | GGCA | 2 | 8 | 14487 | 14494 | 25 % | 0 % | 50 % | 25 % | 296112181 |
41 | NC_014144 | CGGG | 2 | 8 | 14605 | 14612 | 0 % | 0 % | 75 % | 25 % | 296112181 |
42 | NC_014144 | CTGA | 2 | 8 | 14629 | 14636 | 25 % | 25 % | 25 % | 25 % | 296112181 |
43 | NC_014144 | GCGG | 2 | 8 | 15070 | 15077 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
44 | NC_014144 | GGCG | 2 | 8 | 15094 | 15101 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
45 | NC_014144 | TGCC | 2 | 8 | 15352 | 15359 | 0 % | 25 % | 25 % | 50 % | 296112182 |
46 | NC_014144 | GGCG | 2 | 8 | 15381 | 15388 | 0 % | 0 % | 75 % | 25 % | 296112182 |
47 | NC_014144 | GCCC | 2 | 8 | 16077 | 16084 | 0 % | 0 % | 25 % | 75 % | 296112182 |
48 | NC_014144 | CGTG | 2 | 8 | 16238 | 16245 | 0 % | 25 % | 50 % | 25 % | 296112183 |
49 | NC_014144 | CGAG | 2 | 8 | 16267 | 16274 | 25 % | 0 % | 50 % | 25 % | 296112183 |
50 | NC_014144 | CGGG | 2 | 8 | 16435 | 16442 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
51 | NC_014144 | GGGC | 2 | 8 | 17257 | 17264 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
52 | NC_014144 | GCCC | 2 | 8 | 17433 | 17440 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
53 | NC_014144 | CCCA | 2 | 8 | 17560 | 17567 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
54 | NC_014144 | CGAG | 2 | 8 | 17692 | 17699 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
55 | NC_014144 | GGAC | 2 | 8 | 17907 | 17914 | 25 % | 0 % | 50 % | 25 % | 296112185 |
56 | NC_014144 | TGCC | 2 | 8 | 17943 | 17950 | 0 % | 25 % | 25 % | 50 % | 296112185 |
57 | NC_014144 | TTGA | 2 | 8 | 18827 | 18834 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
58 | NC_014144 | ATTT | 2 | 8 | 18858 | 18865 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
59 | NC_014144 | CGGG | 2 | 8 | 19278 | 19285 | 0 % | 0 % | 75 % | 25 % | 296112186 |
60 | NC_014144 | GTCG | 2 | 8 | 19298 | 19305 | 0 % | 25 % | 50 % | 25 % | 296112186 |
61 | NC_014144 | TGGG | 2 | 8 | 19650 | 19657 | 0 % | 25 % | 75 % | 0 % | 296112187 |
62 | NC_014144 | GTTT | 2 | 8 | 19710 | 19717 | 0 % | 75 % | 25 % | 0 % | 296112187 |
63 | NC_014144 | GCTG | 2 | 8 | 19741 | 19748 | 0 % | 25 % | 50 % | 25 % | 296112187 |
64 | NC_014144 | GCTG | 2 | 8 | 19969 | 19976 | 0 % | 25 % | 50 % | 25 % | 296112188 |
65 | NC_014144 | ACAA | 2 | 8 | 20346 | 20353 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
66 | NC_014144 | AAGG | 2 | 8 | 20996 | 21003 | 50 % | 0 % | 50 % | 0 % | 296112189 |
67 | NC_014144 | CCGC | 2 | 8 | 21110 | 21117 | 0 % | 0 % | 25 % | 75 % | 296112189 |
68 | NC_014144 | ACGC | 2 | 8 | 21129 | 21136 | 25 % | 0 % | 25 % | 50 % | 296112189 |
69 | NC_014144 | TGGA | 2 | 8 | 21985 | 21992 | 25 % | 25 % | 50 % | 0 % | 296112192 |
70 | NC_014144 | AAGA | 3 | 12 | 22542 | 22553 | 75 % | 0 % | 25 % | 0 % | 296112194 |
71 | NC_014144 | CTGT | 2 | 8 | 22763 | 22770 | 0 % | 50 % | 25 % | 25 % | 296112194 |
72 | NC_014144 | GATT | 2 | 8 | 22951 | 22958 | 25 % | 50 % | 25 % | 0 % | 296112195 |
73 | NC_014144 | TGCA | 2 | 8 | 23233 | 23240 | 25 % | 25 % | 25 % | 25 % | 296112195 |
74 | NC_014144 | TGGC | 2 | 8 | 24176 | 24183 | 0 % | 25 % | 50 % | 25 % | 296112196 |
75 | NC_014144 | GCGA | 2 | 8 | 24224 | 24231 | 25 % | 0 % | 50 % | 25 % | 296112196 |
76 | NC_014144 | CGCA | 2 | 8 | 24320 | 24327 | 25 % | 0 % | 25 % | 50 % | 296112196 |
77 | NC_014144 | CAGC | 2 | 8 | 24736 | 24743 | 25 % | 0 % | 25 % | 50 % | 296112197 |
78 | NC_014144 | CACG | 2 | 8 | 25306 | 25313 | 25 % | 0 % | 25 % | 50 % | 296112197 |
79 | NC_014144 | CTGG | 2 | 8 | 26933 | 26940 | 0 % | 25 % | 50 % | 25 % | 296112200 |
80 | NC_014144 | TTCG | 2 | 8 | 27297 | 27304 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
81 | NC_014144 | CAGC | 2 | 8 | 27471 | 27478 | 25 % | 0 % | 25 % | 50 % | 296112202 |
82 | NC_014144 | CATC | 2 | 8 | 27648 | 27655 | 25 % | 25 % | 0 % | 50 % | 296112202 |
83 | NC_014144 | CTTT | 2 | 8 | 28030 | 28037 | 0 % | 75 % | 0 % | 25 % | 296112202 |
84 | NC_014144 | TGCT | 2 | 8 | 28756 | 28763 | 0 % | 50 % | 25 % | 25 % | 296112202 |
85 | NC_014144 | GCGG | 2 | 8 | 28943 | 28950 | 0 % | 0 % | 75 % | 25 % | 296112202 |
86 | NC_014144 | GTGC | 2 | 8 | 29932 | 29939 | 0 % | 25 % | 50 % | 25 % | 296112203 |
87 | NC_014144 | AGCG | 2 | 8 | 30405 | 30412 | 25 % | 0 % | 50 % | 25 % | 296112203 |
88 | NC_014144 | GGCC | 2 | 8 | 30964 | 30971 | 0 % | 0 % | 50 % | 50 % | 296112203 |
89 | NC_014144 | GCAG | 2 | 8 | 31643 | 31650 | 25 % | 0 % | 50 % | 25 % | 296112204 |
90 | NC_014144 | TCAA | 2 | 8 | 31795 | 31802 | 50 % | 25 % | 0 % | 25 % | 296112204 |
91 | NC_014144 | TTGA | 2 | 8 | 32247 | 32254 | 25 % | 50 % | 25 % | 0 % | 296112204 |
92 | NC_014144 | TGAT | 2 | 8 | 32453 | 32460 | 25 % | 50 % | 25 % | 0 % | 296112205 |
93 | NC_014144 | AAGT | 2 | 8 | 33969 | 33976 | 50 % | 25 % | 25 % | 0 % | 296112206 |
94 | NC_014144 | AGGA | 2 | 8 | 34191 | 34198 | 50 % | 0 % | 50 % | 0 % | 296112206 |
95 | NC_014144 | GCTT | 2 | 8 | 36057 | 36064 | 0 % | 50 % | 25 % | 25 % | 296112208 |
96 | NC_014144 | AAAG | 2 | 8 | 36128 | 36135 | 75 % | 0 % | 25 % | 0 % | 296112208 |
97 | NC_014144 | TCTT | 2 | 8 | 37010 | 37017 | 0 % | 75 % | 0 % | 25 % | 296112210 |
98 | NC_014144 | GTCG | 2 | 8 | 38356 | 38363 | 0 % | 25 % | 50 % | 25 % | 296112211 |
99 | NC_014144 | CGCC | 2 | 8 | 38591 | 38598 | 0 % | 0 % | 25 % | 75 % | 296112211 |
100 | NC_014144 | CCAT | 2 | 8 | 39904 | 39911 | 25 % | 25 % | 0 % | 50 % | 296112211 |
101 | NC_014144 | GGCG | 2 | 8 | 39997 | 40004 | 0 % | 0 % | 75 % | 25 % | 296112211 |
102 | NC_014144 | TGCG | 2 | 8 | 40010 | 40017 | 0 % | 25 % | 50 % | 25 % | 296112211 |
103 | NC_014144 | GACC | 2 | 8 | 40589 | 40596 | 25 % | 0 % | 25 % | 50 % | 296112213 |
104 | NC_014144 | CGCC | 2 | 8 | 40766 | 40773 | 0 % | 0 % | 25 % | 75 % | 296112213 |
105 | NC_014144 | AGCG | 2 | 8 | 40797 | 40804 | 25 % | 0 % | 50 % | 25 % | 296112213 |
106 | NC_014144 | CGCC | 2 | 8 | 41077 | 41084 | 0 % | 0 % | 25 % | 75 % | 296112214 |
107 | NC_014144 | GTTT | 2 | 8 | 41691 | 41698 | 0 % | 75 % | 25 % | 0 % | 296112216 |
108 | NC_014144 | ATTG | 2 | 8 | 41752 | 41759 | 25 % | 50 % | 25 % | 0 % | 296112216 |
109 | NC_014144 | TTGC | 2 | 8 | 42221 | 42228 | 0 % | 50 % | 25 % | 25 % | 296112217 |
110 | NC_014144 | CATC | 2 | 8 | 42327 | 42334 | 25 % | 25 % | 0 % | 50 % | 296112217 |
111 | NC_014144 | CGCC | 2 | 8 | 42643 | 42650 | 0 % | 0 % | 25 % | 75 % | 296112218 |
112 | NC_014144 | CGGG | 2 | 8 | 42893 | 42900 | 0 % | 0 % | 75 % | 25 % | 296112218 |
113 | NC_014144 | GCCC | 2 | 8 | 43819 | 43826 | 0 % | 0 % | 25 % | 75 % | 296112220 |
114 | NC_014144 | CCCA | 2 | 8 | 43946 | 43953 | 25 % | 0 % | 0 % | 75 % | 296112220 |
115 | NC_014144 | ACGG | 2 | 8 | 44139 | 44146 | 25 % | 0 % | 50 % | 25 % | 296112220 |
116 | NC_014144 | GGCG | 2 | 8 | 44216 | 44223 | 0 % | 0 % | 75 % | 25 % | 296112220 |
117 | NC_014144 | GGCG | 2 | 8 | 45137 | 45144 | 0 % | 0 % | 75 % | 25 % | 296112222 |
118 | NC_014144 | ATCT | 2 | 8 | 45326 | 45333 | 25 % | 50 % | 0 % | 25 % | 296112223 |
119 | NC_014144 | GAAA | 2 | 8 | 45868 | 45875 | 75 % | 0 % | 25 % | 0 % | 296112224 |