Penta-nucleotide Non-Coding Repeats of Candidatus Riesia pediculicola USDA chromosome
Total Repeats: 163
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014109 | TTATT | 2 | 10 | 308 | 317 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
2 | NC_014109 | AAATT | 2 | 10 | 571 | 580 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
3 | NC_014109 | AAAAT | 2 | 10 | 1915 | 1924 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
4 | NC_014109 | TTAAA | 2 | 10 | 8594 | 8603 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
5 | NC_014109 | ATTTT | 2 | 10 | 15719 | 15728 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
6 | NC_014109 | AATTT | 2 | 10 | 17066 | 17075 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
7 | NC_014109 | AAATA | 2 | 10 | 17328 | 17337 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
8 | NC_014109 | CAAAT | 2 | 10 | 20993 | 21002 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
9 | NC_014109 | AAATG | 2 | 10 | 22275 | 22284 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
10 | NC_014109 | TGATT | 2 | 10 | 25310 | 25319 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
11 | NC_014109 | AAAAT | 2 | 10 | 27231 | 27240 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
12 | NC_014109 | TCTAG | 2 | 10 | 35494 | 35503 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
13 | NC_014109 | TCGGT | 2 | 10 | 37577 | 37586 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
14 | NC_014109 | TTCGC | 2 | 10 | 38135 | 38144 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
15 | NC_014109 | AACTT | 2 | 10 | 39620 | 39629 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
16 | NC_014109 | TTTGA | 2 | 10 | 40610 | 40619 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
17 | NC_014109 | AAATT | 2 | 10 | 45089 | 45098 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
18 | NC_014109 | AGCTA | 2 | 10 | 46850 | 46859 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
19 | NC_014109 | AAAAT | 2 | 10 | 47379 | 47388 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
20 | NC_014109 | GAAAT | 2 | 10 | 53815 | 53824 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
21 | NC_014109 | CAATC | 2 | 10 | 56157 | 56166 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
22 | NC_014109 | TTTTC | 2 | 10 | 57067 | 57076 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
23 | NC_014109 | GAAAA | 2 | 10 | 57081 | 57090 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
24 | NC_014109 | TTTCG | 2 | 10 | 57863 | 57872 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
25 | NC_014109 | TTTCT | 2 | 10 | 58569 | 58578 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
26 | NC_014109 | AAAAG | 2 | 10 | 59105 | 59114 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
27 | NC_014109 | ATAAA | 2 | 10 | 63987 | 63996 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
28 | NC_014109 | TTTTA | 2 | 10 | 71704 | 71713 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
29 | NC_014109 | TCTGT | 2 | 10 | 71947 | 71956 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
30 | NC_014109 | AATTT | 2 | 10 | 72717 | 72726 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
31 | NC_014109 | TATAT | 2 | 10 | 73242 | 73251 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
32 | NC_014109 | TAATA | 2 | 10 | 84607 | 84616 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
33 | NC_014109 | TAAAA | 2 | 10 | 84648 | 84657 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
34 | NC_014109 | AACTA | 2 | 10 | 87279 | 87288 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
35 | NC_014109 | ACAAT | 2 | 10 | 95263 | 95272 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
36 | NC_014109 | AAATT | 2 | 10 | 95820 | 95829 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
37 | NC_014109 | AAAAT | 2 | 10 | 98711 | 98720 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
38 | NC_014109 | ATTTT | 2 | 10 | 112531 | 112540 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
39 | NC_014109 | ATTTT | 2 | 10 | 120906 | 120915 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
40 | NC_014109 | CTGAG | 2 | 10 | 124204 | 124213 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
41 | NC_014109 | TTTAA | 2 | 10 | 127377 | 127386 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
42 | NC_014109 | ATGAT | 2 | 10 | 136161 | 136170 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
43 | NC_014109 | TCAAT | 2 | 10 | 140318 | 140327 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
44 | NC_014109 | TCTTT | 2 | 10 | 151885 | 151894 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
45 | NC_014109 | AAAAT | 2 | 10 | 153539 | 153548 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
46 | NC_014109 | ATGTA | 2 | 10 | 153845 | 153854 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
47 | NC_014109 | AAATA | 2 | 10 | 165776 | 165785 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
48 | NC_014109 | AAACA | 2 | 10 | 165927 | 165936 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
49 | NC_014109 | TCTTT | 2 | 10 | 179378 | 179387 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
50 | NC_014109 | TGATT | 2 | 10 | 180933 | 180942 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
51 | NC_014109 | TAATC | 2 | 10 | 187260 | 187269 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
52 | NC_014109 | TTTGG | 2 | 10 | 187621 | 187630 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
53 | NC_014109 | AATTG | 2 | 10 | 188024 | 188033 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
54 | NC_014109 | TTTGA | 2 | 10 | 188608 | 188617 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
55 | NC_014109 | ATTTT | 2 | 10 | 190810 | 190819 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
56 | NC_014109 | TTTTA | 2 | 10 | 193633 | 193642 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
57 | NC_014109 | GAATA | 2 | 10 | 194078 | 194087 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
58 | NC_014109 | TAATT | 2 | 10 | 194757 | 194766 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
59 | NC_014109 | TCGAA | 2 | 10 | 202583 | 202592 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
60 | NC_014109 | TTTAA | 2 | 10 | 204051 | 204060 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
61 | NC_014109 | AAGAT | 2 | 10 | 205530 | 205539 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
62 | NC_014109 | TTTAT | 2 | 10 | 205709 | 205718 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
63 | NC_014109 | ATTTT | 2 | 10 | 207211 | 207220 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
64 | NC_014109 | GGAAA | 2 | 10 | 207311 | 207320 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
65 | NC_014109 | GATTA | 2 | 10 | 207417 | 207426 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
66 | NC_014109 | AATAA | 2 | 10 | 213966 | 213975 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
67 | NC_014109 | AAAAT | 2 | 10 | 217952 | 217961 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
68 | NC_014109 | AAATT | 2 | 10 | 224629 | 224638 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
69 | NC_014109 | GATAA | 2 | 10 | 227911 | 227920 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
70 | NC_014109 | ATCTT | 2 | 10 | 231302 | 231311 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
71 | NC_014109 | AGTAA | 2 | 10 | 239114 | 239123 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
72 | NC_014109 | TTTCA | 2 | 10 | 240202 | 240211 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
73 | NC_014109 | ATGAG | 2 | 10 | 241726 | 241735 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
74 | NC_014109 | TTCTT | 2 | 10 | 247633 | 247642 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
75 | NC_014109 | TAAAG | 2 | 10 | 253893 | 253902 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
76 | NC_014109 | TAAGT | 2 | 10 | 256244 | 256253 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
77 | NC_014109 | GAAAA | 2 | 10 | 258594 | 258603 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
78 | NC_014109 | ATGAT | 2 | 10 | 266055 | 266064 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
79 | NC_014109 | CTATT | 2 | 10 | 269002 | 269011 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
80 | NC_014109 | TTTAA | 2 | 10 | 270421 | 270430 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
81 | NC_014109 | ATTTA | 2 | 10 | 270565 | 270574 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
82 | NC_014109 | ATTTT | 2 | 10 | 271256 | 271265 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
83 | NC_014109 | AAAAC | 2 | 10 | 276198 | 276207 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
84 | NC_014109 | GATAA | 2 | 10 | 277089 | 277098 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
85 | NC_014109 | ACTTA | 2 | 10 | 280131 | 280140 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
86 | NC_014109 | ATTGA | 2 | 10 | 280515 | 280524 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
87 | NC_014109 | AAAGT | 2 | 10 | 281624 | 281633 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
88 | NC_014109 | AATTA | 2 | 10 | 291090 | 291099 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
89 | NC_014109 | TGAAA | 2 | 10 | 291817 | 291826 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
90 | NC_014109 | TTCTT | 2 | 10 | 294657 | 294666 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
91 | NC_014109 | AAAGA | 2 | 10 | 295037 | 295046 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
92 | NC_014109 | GTTTT | 2 | 10 | 299765 | 299774 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
93 | NC_014109 | ATTCC | 2 | 10 | 301203 | 301212 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
94 | NC_014109 | AATTT | 2 | 10 | 301423 | 301432 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
95 | NC_014109 | AATTT | 2 | 10 | 301442 | 301451 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
96 | NC_014109 | GATTT | 2 | 10 | 308596 | 308605 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
97 | NC_014109 | CTAAT | 2 | 10 | 308673 | 308682 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
98 | NC_014109 | ATGAA | 2 | 10 | 331673 | 331682 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
99 | NC_014109 | TCTAG | 2 | 10 | 334188 | 334197 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
100 | NC_014109 | TCGGT | 2 | 10 | 336271 | 336280 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
101 | NC_014109 | TTCGC | 2 | 10 | 336829 | 336838 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
102 | NC_014109 | AACTT | 2 | 10 | 338237 | 338246 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
103 | NC_014109 | TCAAT | 2 | 10 | 339118 | 339127 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
104 | NC_014109 | TAAAA | 2 | 10 | 342582 | 342591 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
105 | NC_014109 | CTTTT | 2 | 10 | 347203 | 347212 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
106 | NC_014109 | CGATT | 2 | 10 | 348731 | 348740 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
107 | NC_014109 | TTGAT | 2 | 10 | 356665 | 356674 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
108 | NC_014109 | TAAAA | 2 | 10 | 362197 | 362206 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
109 | NC_014109 | TTTTC | 2 | 10 | 364496 | 364505 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
110 | NC_014109 | AGTTG | 2 | 10 | 370169 | 370178 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
111 | NC_014109 | ACAAA | 2 | 10 | 370279 | 370288 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
112 | NC_014109 | AGAAA | 2 | 10 | 373800 | 373809 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
113 | NC_014109 | ATGAT | 2 | 10 | 381756 | 381765 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
114 | NC_014109 | CATCT | 2 | 10 | 381807 | 381816 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
115 | NC_014109 | ATTTA | 2 | 10 | 384763 | 384772 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
116 | NC_014109 | ATTTT | 2 | 10 | 385026 | 385035 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
117 | NC_014109 | ATTTT | 2 | 10 | 387193 | 387202 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
118 | NC_014109 | TAATT | 2 | 10 | 388293 | 388302 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
119 | NC_014109 | TTTTC | 2 | 10 | 389210 | 389219 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
120 | NC_014109 | ATAAA | 2 | 10 | 407450 | 407459 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
121 | NC_014109 | AATTT | 2 | 10 | 417984 | 417993 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
122 | NC_014109 | ATTTA | 2 | 10 | 436747 | 436756 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
123 | NC_014109 | TTTTA | 2 | 10 | 440114 | 440123 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
124 | NC_014109 | AGAAT | 2 | 10 | 440368 | 440377 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
125 | NC_014109 | GAATT | 2 | 10 | 442723 | 442732 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
126 | NC_014109 | AATAG | 2 | 10 | 448533 | 448542 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
127 | NC_014109 | AAAAT | 2 | 10 | 449620 | 449629 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
128 | NC_014109 | ATTTT | 2 | 10 | 453125 | 453134 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
129 | NC_014109 | AATTT | 2 | 10 | 466787 | 466796 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
130 | NC_014109 | TTTCT | 2 | 10 | 470271 | 470280 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
131 | NC_014109 | ATTTA | 2 | 10 | 470411 | 470420 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
132 | NC_014109 | AATTT | 2 | 10 | 470574 | 470583 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
133 | NC_014109 | TTTTC | 2 | 10 | 474817 | 474826 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
134 | NC_014109 | AAATT | 2 | 10 | 474999 | 475008 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
135 | NC_014109 | TTTGT | 2 | 10 | 477606 | 477615 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
136 | NC_014109 | AAATT | 2 | 10 | 477798 | 477807 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
137 | NC_014109 | TTTTA | 2 | 10 | 479144 | 479153 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
138 | NC_014109 | CTTAG | 2 | 10 | 481324 | 481333 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
139 | NC_014109 | AATTT | 2 | 10 | 481369 | 481378 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
140 | NC_014109 | AAAAC | 2 | 10 | 481463 | 481472 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
141 | NC_014109 | AAAAT | 2 | 10 | 487800 | 487809 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
142 | NC_014109 | ATATT | 2 | 10 | 487927 | 487936 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
143 | NC_014109 | TTATG | 2 | 10 | 487957 | 487966 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
144 | NC_014109 | TTCTT | 2 | 10 | 488785 | 488794 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
145 | NC_014109 | AAAAG | 2 | 10 | 488796 | 488805 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
146 | NC_014109 | AAATT | 2 | 10 | 489023 | 489032 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
147 | NC_014109 | AAAAT | 2 | 10 | 504807 | 504816 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
148 | NC_014109 | CATTT | 2 | 10 | 506735 | 506744 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
149 | NC_014109 | AATTA | 2 | 10 | 507087 | 507096 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
150 | NC_014109 | TTAAT | 2 | 10 | 507378 | 507387 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
151 | NC_014109 | AAATT | 2 | 10 | 513916 | 513925 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
152 | NC_014109 | TATTT | 2 | 10 | 518908 | 518917 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
153 | NC_014109 | TAAAT | 2 | 10 | 525118 | 525127 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
154 | NC_014109 | ATTAA | 2 | 10 | 525199 | 525208 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
155 | NC_014109 | GAAAA | 2 | 10 | 531350 | 531359 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
156 | NC_014109 | ATTTA | 2 | 10 | 536776 | 536785 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
157 | NC_014109 | ATTTT | 2 | 10 | 536964 | 536973 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
158 | NC_014109 | TAGAT | 2 | 10 | 544086 | 544095 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
159 | NC_014109 | TTATT | 2 | 10 | 546092 | 546101 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
160 | NC_014109 | ATTCT | 2 | 10 | 548613 | 548622 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
161 | NC_014109 | AATTT | 2 | 10 | 551399 | 551408 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
162 | NC_014109 | TAATC | 2 | 10 | 551517 | 551526 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
163 | NC_014109 | TATAA | 2 | 10 | 551634 | 551643 | 60 % | 40 % | 0 % | 0 % | Non-Coding |