MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Haloferax volcanii DS2 plasmid pHV4

Total Repeats: 32

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013966	TCGTCA	2	12	1703	1714	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
2	NC_013966	ATCCCG	2	12	9485	9496	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
3	NC_013966	CGCCCT	2	12	12693	12704	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
4	NC_013966	GACAGC	2	12	150530	150541	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_013966	CCGCGG	2	12	200679	200690	0 %	0 %	50 %	50 %	Non-Coding
6	NC_013966	TGTGAA	2	12	205553	205564	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_013966	CACGAC	2	12	231200	231211	33.33 %	0 %	16.67 %	50 %	Non-Coding
8	NC_013966	TTTGTC	2	12	250265	250276	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
9	NC_013966	CGTCAC	2	12	265695	265706	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
10	NC_013966	GGTGTC	2	12	265945	265956	0 %	33.33 %	50 %	16.67 %	Non-Coding
11	NC_013966	CATTAT	2	12	283852	283863	33.33 %	50 %	0 %	16.67 %	Non-Coding
12	NC_013966	CGATAA	2	12	291832	291843	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
13	NC_013966	GCCGAG	2	12	323231	323242	16.67 %	0 %	50 %	33.33 %	Non-Coding
14	NC_013966	AAGACG	2	12	336188	336199	50 %	0 %	33.33 %	16.67 %	Non-Coding
15	NC_013966	TCGACA	2	12	344343	344354	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
16	NC_013966	GCGCGA	2	12	357331	357342	16.67 %	0 %	50 %	33.33 %	Non-Coding
17	NC_013966	GTCCAG	2	12	382985	382996	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
18	NC_013966	CCGGGC	2	12	415053	415064	0 %	0 %	50 %	50 %	Non-Coding
19	NC_013966	ATACAT	2	12	421938	421949	50 %	33.33 %	0 %	16.67 %	Non-Coding
20	NC_013966	TACCTG	2	12	461285	461296	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
21	NC_013966	CGAACG	2	12	466892	466903	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
22	NC_013966	GTGGGT	2	12	476207	476218	0 %	33.33 %	66.67 %	0 %	Non-Coding
23	NC_013966	GCCGAC	2	12	488367	488378	16.67 %	0 %	33.33 %	50 %	Non-Coding
24	NC_013966	CGACTT	2	12	488409	488420	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
25	NC_013966	TCACCG	2	12	523420	523431	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
26	NC_013966	GTCGCG	2	12	547610	547621	0 %	16.67 %	50 %	33.33 %	Non-Coding
27	NC_013966	ACCGCC	2	12	578766	578777	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
28	NC_013966	ACCGAA	2	12	597353	597364	50 %	0 %	16.67 %	33.33 %	Non-Coding
29	NC_013966	CGTGAC	2	12	600474	600485	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
30	NC_013966	GGACGC	2	12	613510	613521	16.67 %	0 %	50 %	33.33 %	Non-Coding
31	NC_013966	AGACGG	2	12	621216	621227	33.33 %	0 %	50 %	16.67 %	Non-Coding
32	NC_013966	GACGGA	2	12	634951	634962	33.33 %	0 %	50 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.