Penta-nucleotide Non-Coding Repeats of Haloferax volcanii DS2 plasmid pHV3
Total Repeats: 60
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_013964 | GCACG | 2 | 10 | 1438 | 1447 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
2 | NC_013964 | GTTCG | 2 | 10 | 3381 | 3390 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
3 | NC_013964 | AACCG | 2 | 10 | 7479 | 7488 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
4 | NC_013964 | ACCGA | 2 | 10 | 13125 | 13134 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
5 | NC_013964 | GCCGT | 2 | 10 | 33998 | 34007 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
6 | NC_013964 | AAATA | 2 | 10 | 37331 | 37340 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
7 | NC_013964 | GTCGC | 2 | 10 | 41638 | 41647 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
8 | NC_013964 | CTCTT | 2 | 10 | 44708 | 44717 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
9 | NC_013964 | TCCTC | 4 | 20 | 44719 | 44738 | 0 % | 40 % | 0 % | 60 % | Non-Coding |
10 | NC_013964 | CCGCC | 2 | 10 | 55167 | 55176 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
11 | NC_013964 | CTCGT | 2 | 10 | 64198 | 64207 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
12 | NC_013964 | TCGAC | 2 | 10 | 72986 | 72995 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
13 | NC_013964 | GCGCC | 2 | 10 | 74548 | 74557 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
14 | NC_013964 | GATGC | 2 | 10 | 81094 | 81103 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
15 | NC_013964 | GACCC | 2 | 10 | 81945 | 81954 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
16 | NC_013964 | AGACG | 2 | 10 | 107083 | 107092 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
17 | NC_013964 | CTTCG | 2 | 10 | 108542 | 108551 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
18 | NC_013964 | TTCGC | 2 | 10 | 112359 | 112368 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
19 | NC_013964 | GTCGC | 2 | 10 | 133558 | 133567 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
20 | NC_013964 | TCCAC | 2 | 10 | 138250 | 138259 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
21 | NC_013964 | CCGAG | 2 | 10 | 144967 | 144976 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
22 | NC_013964 | GCGTC | 2 | 10 | 145062 | 145071 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
23 | NC_013964 | ACGCG | 2 | 10 | 162415 | 162424 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
24 | NC_013964 | CGACC | 2 | 10 | 198556 | 198565 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
25 | NC_013964 | CGAGC | 2 | 10 | 210672 | 210681 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
26 | NC_013964 | GTCCA | 2 | 10 | 229386 | 229395 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
27 | NC_013964 | CGAGA | 2 | 10 | 231137 | 231146 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
28 | NC_013964 | GCGGT | 2 | 10 | 231342 | 231351 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
29 | NC_013964 | GTTCG | 2 | 10 | 233795 | 233804 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
30 | NC_013964 | TCCGC | 2 | 10 | 249404 | 249413 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
31 | NC_013964 | AAAAG | 2 | 10 | 249442 | 249451 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
32 | NC_013964 | AACCC | 2 | 10 | 261995 | 262004 | 40 % | 0 % | 0 % | 60 % | Non-Coding |
33 | NC_013964 | ACGAG | 2 | 10 | 265372 | 265381 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
34 | NC_013964 | TCGGC | 2 | 10 | 292797 | 292806 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
35 | NC_013964 | ACCTC | 2 | 10 | 295938 | 295947 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
36 | NC_013964 | GTCGA | 2 | 10 | 296763 | 296772 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
37 | NC_013964 | GACCA | 2 | 10 | 297943 | 297952 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
38 | NC_013964 | CCCGA | 2 | 10 | 299380 | 299389 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
39 | NC_013964 | CCCGA | 2 | 10 | 299395 | 299404 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
40 | NC_013964 | GGCTG | 2 | 10 | 299545 | 299554 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
41 | NC_013964 | CGCTC | 2 | 10 | 299642 | 299651 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
42 | NC_013964 | CCGAG | 2 | 10 | 301660 | 301669 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
43 | NC_013964 | CTCGA | 2 | 10 | 324509 | 324518 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
44 | NC_013964 | GTTTG | 2 | 10 | 325512 | 325521 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
45 | NC_013964 | AGTGA | 2 | 10 | 329415 | 329424 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
46 | NC_013964 | CGTGC | 2 | 10 | 331606 | 331615 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
47 | NC_013964 | GCGAC | 2 | 10 | 336141 | 336150 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
48 | NC_013964 | CGACC | 2 | 10 | 337311 | 337320 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
49 | NC_013964 | GGCGA | 2 | 10 | 344999 | 345008 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
50 | NC_013964 | AGGAG | 2 | 10 | 345925 | 345934 | 40 % | 0 % | 60 % | 0 % | Non-Coding |
51 | NC_013964 | CACGA | 2 | 10 | 351251 | 351260 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
52 | NC_013964 | AACGA | 2 | 10 | 354110 | 354119 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
53 | NC_013964 | ACCGA | 2 | 10 | 358055 | 358064 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
54 | NC_013964 | CGGTG | 2 | 10 | 370709 | 370718 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
55 | NC_013964 | TATGA | 2 | 10 | 378882 | 378891 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
56 | NC_013964 | TCGGT | 2 | 10 | 381573 | 381582 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
57 | NC_013964 | GTCGC | 2 | 10 | 402693 | 402702 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
58 | NC_013964 | CCGGA | 2 | 10 | 402773 | 402782 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
59 | NC_013964 | GGTTC | 2 | 10 | 406838 | 406847 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
60 | NC_013964 | GATTC | 2 | 10 | 416283 | 416292 | 20 % | 40 % | 20 % | 20 % | Non-Coding |