MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Coding Repeats of Nitrosococcus halophilus Nc4 plasmid pNHAL01

Total Repeats: 14

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013958	TGCCGG	2	12	2382	2393	0 %	16.67 %	50 %	33.33 %	291615454
2	NC_013958	GCCGGC	2	12	8729	8740	0 %	0 %	50 %	50 %	291615460
3	NC_013958	CAAAGC	2	12	9057	9068	50 %	0 %	16.67 %	33.33 %	291615461
4	NC_013958	CTCGGG	2	12	10484	10495	0 %	16.67 %	50 %	33.33 %	291615463
5	NC_013958	GTTTGG	2	12	12210	12221	0 %	50 %	50 %	0 %	291615467
6	NC_013958	CGCCAC	2	12	23374	23385	16.67 %	0 %	16.67 %	66.67 %	291615484
7	NC_013958	GGAGCC	2	12	23936	23947	16.67 %	0 %	50 %	33.33 %	291615485
8	NC_013958	TCTTGA	2	12	26673	26684	16.67 %	50 %	16.67 %	16.67 %	291615489
9	NC_013958	CTCAAT	2	12	30766	30777	33.33 %	33.33 %	0 %	33.33 %	291615494
10	NC_013958	AGGCGG	2	12	38863	38874	16.67 %	0 %	66.67 %	16.67 %	291615504
11	NC_013958	TTTGCT	2	12	50061	50072	0 %	66.67 %	16.67 %	16.67 %	291615513
12	NC_013958	TGGGAT	2	12	60792	60803	16.67 %	33.33 %	50 %	0 %	291615521
13	NC_013958	TCTGTG	2	12	63190	63201	0 %	50 %	33.33 %	16.67 %	291615521
14	NC_013958	GTGGAC	2	12	65193	65204	16.67 %	16.67 %	50 %	16.67 %	291615521

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.