Penta-nucleotide Repeats of Allochromatium vinosum DSM 180 plasmid pALVIN01
Total Repeats: 78
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_013852 | TCGCC | 2 | 10 | 1426 | 1435 | 0 % | 20 % | 20 % | 60 % | 288947676 |
2 | NC_013852 | CGCGG | 2 | 10 | 1747 | 1756 | 0 % | 0 % | 60 % | 40 % | 288947676 |
3 | NC_013852 | TTTCA | 2 | 10 | 2073 | 2082 | 20 % | 60 % | 0 % | 20 % | 288947676 |
4 | NC_013852 | GCCAT | 2 | 10 | 3529 | 3538 | 20 % | 20 % | 20 % | 40 % | 288947677 |
5 | NC_013852 | CAACG | 2 | 10 | 6013 | 6022 | 40 % | 0 % | 20 % | 40 % | 288947679 |
6 | NC_013852 | CCGGT | 2 | 10 | 7611 | 7620 | 0 % | 20 % | 40 % | 40 % | 288947681 |
7 | NC_013852 | CGGTT | 2 | 10 | 12339 | 12348 | 0 % | 40 % | 40 % | 20 % | 288947684 |
8 | NC_013852 | GGGCG | 2 | 10 | 17172 | 17181 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
9 | NC_013852 | GAACA | 2 | 10 | 20009 | 20018 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
10 | NC_013852 | GGGGA | 2 | 10 | 20253 | 20262 | 20 % | 0 % | 80 % | 0 % | 288947694 |
11 | NC_013852 | TGCCC | 2 | 10 | 21197 | 21206 | 0 % | 20 % | 20 % | 60 % | 288947697 |
12 | NC_013852 | GCGTT | 2 | 10 | 23099 | 23108 | 0 % | 40 % | 40 % | 20 % | 288947699 |
13 | NC_013852 | GCAAC | 2 | 10 | 26071 | 26080 | 40 % | 0 % | 20 % | 40 % | 288947702 |
14 | NC_013852 | CGATC | 2 | 10 | 28284 | 28293 | 20 % | 20 % | 20 % | 40 % | 288947705 |
15 | NC_013852 | GATCA | 2 | 10 | 31962 | 31971 | 40 % | 20 % | 20 % | 20 % | 288947711 |
16 | NC_013852 | TCACC | 2 | 10 | 33291 | 33300 | 20 % | 20 % | 0 % | 60 % | 288947712 |
17 | NC_013852 | GTCGA | 2 | 10 | 34174 | 34183 | 20 % | 20 % | 40 % | 20 % | 288947713 |
18 | NC_013852 | CCTGG | 2 | 10 | 35485 | 35494 | 0 % | 20 % | 40 % | 40 % | 288947716 |
19 | NC_013852 | TGAAT | 2 | 10 | 36823 | 36832 | 40 % | 40 % | 20 % | 0 % | 288947718 |
20 | NC_013852 | GCGTG | 2 | 10 | 38272 | 38281 | 0 % | 20 % | 60 % | 20 % | 288947720 |
21 | NC_013852 | GAACT | 2 | 10 | 40784 | 40793 | 40 % | 20 % | 20 % | 20 % | 288947721 |
22 | NC_013852 | CGATC | 2 | 10 | 40906 | 40915 | 20 % | 20 % | 20 % | 40 % | 288947721 |
23 | NC_013852 | TGATT | 2 | 10 | 45494 | 45503 | 20 % | 60 % | 20 % | 0 % | 288947724 |
24 | NC_013852 | TGGGT | 2 | 10 | 45983 | 45992 | 0 % | 40 % | 60 % | 0 % | 288947724 |
25 | NC_013852 | CGGCC | 2 | 10 | 46482 | 46491 | 0 % | 0 % | 40 % | 60 % | 288947725 |
26 | NC_013852 | GCGCG | 2 | 10 | 46909 | 46918 | 0 % | 0 % | 60 % | 40 % | 288947725 |
27 | NC_013852 | GCTTG | 2 | 10 | 49825 | 49834 | 0 % | 40 % | 40 % | 20 % | 288947725 |
28 | NC_013852 | GGCGC | 2 | 10 | 50201 | 50210 | 0 % | 0 % | 60 % | 40 % | 288947725 |
29 | NC_013852 | CGACG | 2 | 10 | 54753 | 54762 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
30 | NC_013852 | AAGTC | 2 | 10 | 56300 | 56309 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
31 | NC_013852 | GACTT | 2 | 10 | 56412 | 56421 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
32 | NC_013852 | ACTTA | 2 | 10 | 56835 | 56844 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
33 | NC_013852 | TCAAG | 2 | 10 | 57836 | 57845 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
34 | NC_013852 | CCGAA | 2 | 10 | 59398 | 59407 | 40 % | 0 % | 20 % | 40 % | 288947737 |
35 | NC_013852 | GCCCC | 2 | 10 | 60578 | 60587 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
36 | NC_013852 | TGCCG | 2 | 10 | 60618 | 60627 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
37 | NC_013852 | CGGCA | 2 | 10 | 60663 | 60672 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
38 | NC_013852 | TGGTC | 2 | 10 | 61412 | 61421 | 0 % | 40 % | 40 % | 20 % | 288947740 |
39 | NC_013852 | GCTCC | 2 | 10 | 61656 | 61665 | 0 % | 20 % | 20 % | 60 % | 288947740 |
40 | NC_013852 | GCGCC | 2 | 10 | 62319 | 62328 | 0 % | 0 % | 40 % | 60 % | 288947740 |
41 | NC_013852 | CGCGA | 2 | 10 | 65033 | 65042 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
42 | NC_013852 | TTTTA | 2 | 10 | 67233 | 67242 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
43 | NC_013852 | CAAGC | 2 | 10 | 68511 | 68520 | 40 % | 0 % | 20 % | 40 % | 288947751 |
44 | NC_013852 | CGCCA | 2 | 10 | 70056 | 70065 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
45 | NC_013852 | CGAAT | 2 | 10 | 71615 | 71624 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
46 | NC_013852 | TTTGA | 2 | 10 | 71736 | 71745 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
47 | NC_013852 | TTTGA | 2 | 10 | 71820 | 71829 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
48 | NC_013852 | CGGCC | 2 | 10 | 71921 | 71930 | 0 % | 0 % | 40 % | 60 % | 288947756 |
49 | NC_013852 | GCGCC | 2 | 10 | 72216 | 72225 | 0 % | 0 % | 40 % | 60 % | 288947756 |
50 | NC_013852 | CCCGC | 2 | 10 | 72572 | 72581 | 0 % | 0 % | 20 % | 80 % | 288947756 |
51 | NC_013852 | CCCGC | 2 | 10 | 74049 | 74058 | 0 % | 0 % | 20 % | 80 % | 288947758 |
52 | NC_013852 | GCCGG | 2 | 10 | 74069 | 74078 | 0 % | 0 % | 60 % | 40 % | 288947758 |
53 | NC_013852 | ACCTC | 2 | 10 | 74338 | 74347 | 20 % | 20 % | 0 % | 60 % | 288947758 |
54 | NC_013852 | GCCGC | 2 | 10 | 74485 | 74494 | 0 % | 0 % | 40 % | 60 % | 288947758 |
55 | NC_013852 | GCAGG | 2 | 10 | 75649 | 75658 | 20 % | 0 % | 60 % | 20 % | 288947759 |
56 | NC_013852 | ATCCT | 2 | 10 | 78394 | 78403 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
57 | NC_013852 | GTGAC | 2 | 10 | 80867 | 80876 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
58 | NC_013852 | CCGGA | 2 | 10 | 81142 | 81151 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
59 | NC_013852 | GCACG | 2 | 10 | 81447 | 81456 | 20 % | 0 % | 40 % | 40 % | 288947766 |
60 | NC_013852 | GCCGC | 2 | 10 | 84478 | 84487 | 0 % | 0 % | 40 % | 60 % | 288947771 |
61 | NC_013852 | GCAAC | 2 | 10 | 84789 | 84798 | 40 % | 0 % | 20 % | 40 % | 288947771 |
62 | NC_013852 | TCAAC | 2 | 10 | 87150 | 87159 | 40 % | 20 % | 0 % | 40 % | 288947775 |
63 | NC_013852 | ACTTC | 2 | 10 | 87566 | 87575 | 20 % | 40 % | 0 % | 40 % | 288947776 |
64 | NC_013852 | TCGGC | 2 | 10 | 90825 | 90834 | 0 % | 20 % | 40 % | 40 % | 288947781 |
65 | NC_013852 | TCGGG | 2 | 10 | 90969 | 90978 | 0 % | 20 % | 60 % | 20 % | 288947781 |
66 | NC_013852 | GGTGC | 2 | 10 | 92084 | 92093 | 0 % | 20 % | 60 % | 20 % | 288947781 |
67 | NC_013852 | TCATC | 2 | 10 | 93362 | 93371 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
68 | NC_013852 | CGCCA | 2 | 10 | 94627 | 94636 | 20 % | 0 % | 20 % | 60 % | 288947783 |
69 | NC_013852 | AGGCG | 2 | 10 | 95231 | 95240 | 20 % | 0 % | 60 % | 20 % | 288947783 |
70 | NC_013852 | GTCGA | 2 | 10 | 98324 | 98333 | 20 % | 20 % | 40 % | 20 % | 288947788 |
71 | NC_013852 | GGCGC | 2 | 10 | 99372 | 99381 | 0 % | 0 % | 60 % | 40 % | 288947790 |
72 | NC_013852 | CGCCC | 2 | 10 | 99769 | 99778 | 0 % | 0 % | 20 % | 80 % | 288947791 |
73 | NC_013852 | GACTT | 2 | 10 | 100641 | 100650 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
74 | NC_013852 | GGCGC | 2 | 10 | 100807 | 100816 | 0 % | 0 % | 60 % | 40 % | 288947792 |
75 | NC_013852 | TTCAT | 2 | 10 | 101267 | 101276 | 20 % | 60 % | 0 % | 20 % | 288947793 |
76 | NC_013852 | CCGGC | 2 | 10 | 102056 | 102065 | 0 % | 0 % | 40 % | 60 % | 288947793 |
77 | NC_013852 | GGGCA | 2 | 10 | 102115 | 102124 | 20 % | 0 % | 60 % | 20 % | 288947793 |
78 | NC_013852 | TTGGG | 2 | 10 | 102131 | 102140 | 0 % | 40 % | 60 % | 0 % | 288947793 |