MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Haloterrigena turkmenica DSM 5511 plasmid pHTUR05

Total Repeats: 108

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013748	AGA	2	6	22	27	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_013748	ATT	2	6	31	36	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_013748	ATA	2	6	85	90	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_013748	TCT	2	6	171	176	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_013748	GTG	2	6	1148	1153	0 %	33.33 %	66.67 %	0 %	Non-Coding
6	NC_013748	ACC	2	6	1158	1163	33.33 %	0 %	0 %	66.67 %	Non-Coding
7	NC_013748	AGC	2	6	1328	1333	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_013748	GGC	2	6	1374	1379	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_013748	GCC	2	6	1419	1424	0 %	0 %	33.33 %	66.67 %	Non-Coding
10	NC_013748	CGT	2	6	2252	2257	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
11	NC_013748	CGA	2	6	2335	2340	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_013748	TCG	2	6	2358	2363	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_013748	GTG	2	6	2422	2427	0 %	33.33 %	66.67 %	0 %	Non-Coding
14	NC_013748	CTA	2	6	2439	2444	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_013748	CAG	2	6	2477	2482	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_013748	CCT	2	6	4356	4361	0 %	33.33 %	0 %	66.67 %	Non-Coding
17	NC_013748	AAT	2	6	4643	4648	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_013748	AAC	2	6	4710	4715	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_013748	AAG	2	6	4785	4790	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_013748	GCG	2	6	4800	4805	0 %	0 %	66.67 %	33.33 %	Non-Coding
21	NC_013748	ATG	2	6	13240	13245	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_013748	GAC	2	6	13296	13301	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
23	NC_013748	TGG	2	6	14635	14640	0 %	33.33 %	66.67 %	0 %	Non-Coding
24	NC_013748	CCG	4	12	14648	14659	0 %	0 %	33.33 %	66.67 %	Non-Coding
25	NC_013748	CCG	2	6	14672	14677	0 %	0 %	33.33 %	66.67 %	Non-Coding
26	NC_013748	CGC	2	6	15878	15883	0 %	0 %	33.33 %	66.67 %	Non-Coding
27	NC_013748	GCG	2	6	15915	15920	0 %	0 %	66.67 %	33.33 %	Non-Coding
28	NC_013748	CCG	2	6	16643	16648	0 %	0 %	33.33 %	66.67 %	Non-Coding
29	NC_013748	CCA	2	6	16673	16678	33.33 %	0 %	0 %	66.67 %	Non-Coding
30	NC_013748	CGC	2	6	19619	19624	0 %	0 %	33.33 %	66.67 %	Non-Coding
31	NC_013748	CAA	2	6	28061	28066	66.67 %	0 %	0 %	33.33 %	Non-Coding
32	NC_013748	CCT	2	6	31081	31086	0 %	33.33 %	0 %	66.67 %	Non-Coding
33	NC_013748	GTC	2	6	31162	31167	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_013748	GGT	2	6	31171	31176	0 %	33.33 %	66.67 %	0 %	Non-Coding
35	NC_013748	CGC	2	6	31193	31198	0 %	0 %	33.33 %	66.67 %	Non-Coding
36	NC_013748	GTG	2	6	31227	31232	0 %	33.33 %	66.67 %	0 %	Non-Coding
37	NC_013748	TAT	2	6	31351	31356	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_013748	GTG	2	6	32979	32984	0 %	33.33 %	66.67 %	0 %	Non-Coding
39	NC_013748	AGT	2	6	33068	33073	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40	NC_013748	CTA	2	6	33164	33169	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
41	NC_013748	CGC	2	6	33245	33250	0 %	0 %	33.33 %	66.67 %	Non-Coding
42	NC_013748	TCG	3	9	33281	33289	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_013748	GTG	2	6	33363	33368	0 %	33.33 %	66.67 %	0 %	Non-Coding
44	NC_013748	CCT	2	6	33413	33418	0 %	33.33 %	0 %	66.67 %	Non-Coding
45	NC_013748	TCT	2	6	38529	38534	0 %	66.67 %	0 %	33.33 %	Non-Coding
46	NC_013748	AGT	2	6	38607	38612	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_013748	GTC	2	6	38615	38620	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
48	NC_013748	CGG	2	6	38627	38632	0 %	0 %	66.67 %	33.33 %	Non-Coding
49	NC_013748	CGG	2	6	38648	38653	0 %	0 %	66.67 %	33.33 %	Non-Coding
50	NC_013748	GCT	2	6	39059	39064	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51	NC_013748	AGT	2	6	39640	39645	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_013748	GCC	2	6	40502	40507	0 %	0 %	33.33 %	66.67 %	Non-Coding
53	NC_013748	TCG	2	6	44664	44669	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
54	NC_013748	AGT	2	6	44679	44684	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_013748	TGC	2	6	44720	44725	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_013748	TTG	2	6	44813	44818	0 %	66.67 %	33.33 %	0 %	Non-Coding
57	NC_013748	TGA	2	6	44851	44856	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
58	NC_013748	GCG	2	6	44870	44875	0 %	0 %	66.67 %	33.33 %	Non-Coding
59	NC_013748	CGC	2	6	44941	44946	0 %	0 %	33.33 %	66.67 %	Non-Coding
60	NC_013748	GCC	2	6	45808	45813	0 %	0 %	33.33 %	66.67 %	Non-Coding
61	NC_013748	CGG	2	6	45817	45822	0 %	0 %	66.67 %	33.33 %	Non-Coding
62	NC_013748	TAG	2	6	45823	45828	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_013748	ACC	2	6	45912	45917	33.33 %	0 %	0 %	66.67 %	Non-Coding
64	NC_013748	GAG	2	6	45953	45958	33.33 %	0 %	66.67 %	0 %	Non-Coding
65	NC_013748	GCT	2	6	46025	46030	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
66	NC_013748	TCG	2	6	46053	46058	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
67	NC_013748	CCG	2	6	46059	46064	0 %	0 %	33.33 %	66.67 %	Non-Coding
68	NC_013748	CGT	2	6	46067	46072	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
69	NC_013748	CAT	2	6	46549	46554	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_013748	GGC	2	6	46621	46626	0 %	0 %	66.67 %	33.33 %	Non-Coding
71	NC_013748	TCG	2	6	48117	48122	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
72	NC_013748	CAA	2	6	48134	48139	66.67 %	0 %	0 %	33.33 %	Non-Coding
73	NC_013748	ACG	2	6	48160	48165	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_013748	CGG	2	6	48176	48181	0 %	0 %	66.67 %	33.33 %	Non-Coding
75	NC_013748	ACC	2	6	48262	48267	33.33 %	0 %	0 %	66.67 %	Non-Coding
76	NC_013748	CGC	3	9	48343	48351	0 %	0 %	33.33 %	66.67 %	Non-Coding
77	NC_013748	GTA	2	6	60712	60717	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
78	NC_013748	TGG	2	6	62166	62171	0 %	33.33 %	66.67 %	0 %	Non-Coding
79	NC_013748	GCA	2	6	65421	65426	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
80	NC_013748	CTT	2	6	65577	65582	0 %	66.67 %	0 %	33.33 %	Non-Coding
81	NC_013748	CGG	2	6	65693	65698	0 %	0 %	66.67 %	33.33 %	Non-Coding
82	NC_013748	GCC	2	6	65738	65743	0 %	0 %	33.33 %	66.67 %	Non-Coding
83	NC_013748	AAC	2	6	65746	65751	66.67 %	0 %	0 %	33.33 %	Non-Coding
84	NC_013748	GCA	2	6	66208	66213	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
85	NC_013748	CGT	2	6	66250	66255	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
86	NC_013748	TAG	2	6	66415	66420	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
87	NC_013748	CGA	2	6	66805	66810	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
88	NC_013748	ATC	2	6	66880	66885	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
89	NC_013748	CAG	2	6	66903	66908	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
90	NC_013748	ACT	2	6	66991	66996	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
91	NC_013748	ACA	2	6	67146	67151	66.67 %	0 %	0 %	33.33 %	Non-Coding
92	NC_013748	TTC	2	6	67161	67166	0 %	66.67 %	0 %	33.33 %	Non-Coding
93	NC_013748	GAC	2	6	67210	67215	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
94	NC_013748	AGA	2	6	67230	67235	66.67 %	0 %	33.33 %	0 %	Non-Coding
95	NC_013748	AGA	2	6	67664	67669	66.67 %	0 %	33.33 %	0 %	Non-Coding
96	NC_013748	GTC	2	6	68227	68232	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
97	NC_013748	ACG	2	6	68259	68264	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
98	NC_013748	TTC	2	6	68305	68310	0 %	66.67 %	0 %	33.33 %	Non-Coding
99	NC_013748	CTT	2	6	68337	68342	0 %	66.67 %	0 %	33.33 %	Non-Coding
100	NC_013748	CAC	2	6	68432	68437	33.33 %	0 %	0 %	66.67 %	Non-Coding
101	NC_013748	AAT	2	6	68524	68529	66.67 %	33.33 %	0 %	0 %	Non-Coding
102	NC_013748	GGT	2	6	69768	69773	0 %	33.33 %	66.67 %	0 %	Non-Coding
103	NC_013748	CAT	2	6	70004	70009	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
104	NC_013748	TCG	2	6	70134	70139	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
105	NC_013748	CCG	2	6	70163	70168	0 %	0 %	33.33 %	66.67 %	Non-Coding
106	NC_013748	ACG	2	6	70642	70647	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
107	NC_013748	TGG	2	6	70699	70704	0 %	33.33 %	66.67 %	0 %	Non-Coding
108	NC_013748	ACG	2	6	70725	70730	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.