MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Coding Repeats of Escherichia coli O26:H11 str. 11368 plasmid pO26_3

Total Repeats: 63

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013363	CAG	2	6	129	134	33.33 %	0 %	33.33 %	33.33 %	260751829
2	NC_013363	TGA	2	6	152	157	33.33 %	33.33 %	33.33 %	0 %	260751830
3	NC_013363	TGA	3	9	282	290	33.33 %	33.33 %	33.33 %	0 %	260751831
4	NC_013363	AAC	2	6	323	328	66.67 %	0 %	0 %	33.33 %	260751831
5	NC_013363	GCG	2	6	342	347	0 %	0 %	66.67 %	33.33 %	260751831
6	NC_013363	CCG	2	6	400	405	0 %	0 %	33.33 %	66.67 %	260751831
7	NC_013363	GCC	2	6	421	426	0 %	0 %	33.33 %	66.67 %	260751831
8	NC_013363	GAT	2	6	574	579	33.33 %	33.33 %	33.33 %	0 %	260751831
9	NC_013363	GGT	2	6	605	610	0 %	33.33 %	66.67 %	0 %	260751832
10	NC_013363	CTG	2	6	632	637	0 %	33.33 %	33.33 %	33.33 %	260751832
11	NC_013363	GAA	2	6	686	691	66.67 %	0 %	33.33 %	0 %	260751832
12	NC_013363	GAA	2	6	724	729	66.67 %	0 %	33.33 %	0 %	260751832
13	NC_013363	GCC	2	6	769	774	0 %	0 %	33.33 %	66.67 %	260751832
14	NC_013363	GGA	2	6	776	781	33.33 %	0 %	66.67 %	0 %	260751832
15	NC_013363	TAC	2	6	941	946	33.33 %	33.33 %	0 %	33.33 %	260751832
16	NC_013363	CCG	2	6	1033	1038	0 %	0 %	33.33 %	66.67 %	260751832
17	NC_013363	CGG	2	6	1228	1233	0 %	0 %	66.67 %	33.33 %	260751832
18	NC_013363	AAC	2	6	1341	1346	66.67 %	0 %	0 %	33.33 %	260751832
19	NC_013363	AGG	2	6	1353	1358	33.33 %	0 %	66.67 %	0 %	260751832
20	NC_013363	GAT	2	6	1481	1486	33.33 %	33.33 %	33.33 %	0 %	260751832
21	NC_013363	GCA	2	6	1487	1492	33.33 %	0 %	33.33 %	33.33 %	260751832
22	NC_013363	ATG	2	6	1530	1535	33.33 %	33.33 %	33.33 %	0 %	260751832
23	NC_013363	GAA	2	6	1617	1622	66.67 %	0 %	33.33 %	0 %	260751832
24	NC_013363	AGC	2	6	1825	1830	33.33 %	0 %	33.33 %	33.33 %	260751832
25	NC_013363	AGA	2	6	1888	1893	66.67 %	0 %	33.33 %	0 %	260751832
26	NC_013363	CAG	2	6	1953	1958	33.33 %	0 %	33.33 %	33.33 %	260751832
27	NC_013363	GCA	2	6	1961	1966	33.33 %	0 %	33.33 %	33.33 %	260751832
28	NC_013363	CAC	2	6	2425	2430	33.33 %	0 %	0 %	66.67 %	260751833
29	NC_013363	TCT	2	6	2492	2497	0 %	66.67 %	0 %	33.33 %	260751833
30	NC_013363	TGC	2	6	2510	2515	0 %	33.33 %	33.33 %	33.33 %	260751833
31	NC_013363	TGT	2	6	2522	2527	0 %	66.67 %	33.33 %	0 %	260751833
32	NC_013363	CAT	2	6	2557	2562	33.33 %	33.33 %	0 %	33.33 %	260751833
33	NC_013363	TCG	2	6	2673	2678	0 %	33.33 %	33.33 %	33.33 %	260751833
34	NC_013363	ATG	2	6	2711	2716	33.33 %	33.33 %	33.33 %	0 %	260751833
35	NC_013363	ATC	2	6	2879	2884	33.33 %	33.33 %	0 %	33.33 %	260751833
36	NC_013363	CTT	2	6	2899	2904	0 %	66.67 %	0 %	33.33 %	260751833
37	NC_013363	CTT	2	6	2970	2975	0 %	66.67 %	0 %	33.33 %	260751833
38	NC_013363	TGA	2	6	2995	3000	33.33 %	33.33 %	33.33 %	0 %	260751833
39	NC_013363	TTA	2	6	3040	3045	33.33 %	66.67 %	0 %	0 %	260751833
40	NC_013363	TCA	2	6	3069	3074	33.33 %	33.33 %	0 %	33.33 %	260751833
41	NC_013363	TCA	2	6	3147	3152	33.33 %	33.33 %	0 %	33.33 %	260751833
42	NC_013363	GTA	2	6	3187	3192	33.33 %	33.33 %	33.33 %	0 %	260751833
43	NC_013363	TAA	2	6	3277	3282	66.67 %	33.33 %	0 %	0 %	260751833
44	NC_013363	CTA	2	6	3367	3372	33.33 %	33.33 %	0 %	33.33 %	260751833
45	NC_013363	ATC	2	6	3398	3403	33.33 %	33.33 %	0 %	33.33 %	260751833
46	NC_013363	GTT	2	6	3717	3722	0 %	66.67 %	33.33 %	0 %	260751834
47	NC_013363	ATG	2	6	3724	3729	33.33 %	33.33 %	33.33 %	0 %	260751834
48	NC_013363	AAG	2	6	3832	3837	66.67 %	0 %	33.33 %	0 %	260751834
49	NC_013363	AGC	2	6	3850	3855	33.33 %	0 %	33.33 %	33.33 %	260751834
50	NC_013363	ATG	2	6	3933	3938	33.33 %	33.33 %	33.33 %	0 %	260751834
51	NC_013363	AAG	2	6	4012	4017	66.67 %	0 %	33.33 %	0 %	260751834
52	NC_013363	TGG	2	6	4070	4075	0 %	33.33 %	66.67 %	0 %	260751834
53	NC_013363	AGA	2	6	4091	4096	66.67 %	0 %	33.33 %	0 %	260751834
54	NC_013363	TAT	2	6	4106	4111	33.33 %	66.67 %	0 %	0 %	260751834
55	NC_013363	AAT	2	6	4208	4213	66.67 %	33.33 %	0 %	0 %	260751834
56	NC_013363	GAA	2	6	4239	4244	66.67 %	0 %	33.33 %	0 %	260751834
57	NC_013363	CAA	2	6	4273	4278	66.67 %	0 %	0 %	33.33 %	260751834
58	NC_013363	TGA	2	6	4283	4288	33.33 %	33.33 %	33.33 %	0 %	260751834
59	NC_013363	GAT	2	6	4407	4412	33.33 %	33.33 %	33.33 %	0 %	260751834
60	NC_013363	ATA	2	6	4429	4434	66.67 %	33.33 %	0 %	0 %	260751834
61	NC_013363	TTG	2	6	4450	4455	0 %	66.67 %	33.33 %	0 %	260751834
62	NC_013363	GTT	2	6	4512	4517	0 %	66.67 %	33.33 %	0 %	260751834
63	NC_013363	GAT	2	6	4581	4586	33.33 %	33.33 %	33.33 %	0 %	260751834

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.