Tetra-nucleotide Coding Repeats of Desulfohalobium retbaense DSM 5692 plasmid pDRET01
Total Repeats: 82
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_013224 | AAGG | 2 | 8 | 696 | 703 | 50 % | 0 % | 50 % | 0 % | 258406619 |
2 | NC_013224 | GATT | 2 | 8 | 1283 | 1290 | 25 % | 50 % | 25 % | 0 % | 258406620 |
3 | NC_013224 | AAAG | 2 | 8 | 2477 | 2484 | 75 % | 0 % | 25 % | 0 % | 258406623 |
4 | NC_013224 | CTGC | 2 | 8 | 2637 | 2644 | 0 % | 25 % | 25 % | 50 % | 258406623 |
5 | NC_013224 | CAGG | 2 | 8 | 2775 | 2782 | 25 % | 0 % | 50 % | 25 % | 258406623 |
6 | NC_013224 | TCAT | 2 | 8 | 3847 | 3854 | 25 % | 50 % | 0 % | 25 % | 258406625 |
7 | NC_013224 | CAAA | 2 | 8 | 3861 | 3868 | 75 % | 0 % | 0 % | 25 % | 258406625 |
8 | NC_013224 | CAAA | 2 | 8 | 4054 | 4061 | 75 % | 0 % | 0 % | 25 % | 258406625 |
9 | NC_013224 | TTAT | 2 | 8 | 4393 | 4400 | 25 % | 75 % | 0 % | 0 % | 258406625 |
10 | NC_013224 | AGAT | 2 | 8 | 4540 | 4547 | 50 % | 25 % | 25 % | 0 % | 258406625 |
11 | NC_013224 | ATCT | 3 | 12 | 4553 | 4564 | 25 % | 50 % | 0 % | 25 % | 258406625 |
12 | NC_013224 | CTTT | 2 | 8 | 4663 | 4670 | 0 % | 75 % | 0 % | 25 % | 258406625 |
13 | NC_013224 | TGAC | 2 | 8 | 4810 | 4817 | 25 % | 25 % | 25 % | 25 % | 258406625 |
14 | NC_013224 | TATT | 2 | 8 | 5102 | 5109 | 25 % | 75 % | 0 % | 0 % | 258406625 |
15 | NC_013224 | TCAA | 2 | 8 | 7003 | 7010 | 50 % | 25 % | 0 % | 25 % | 258406627 |
16 | NC_013224 | GGCC | 2 | 8 | 7049 | 7056 | 0 % | 0 % | 50 % | 50 % | 258406627 |
17 | NC_013224 | CGGT | 2 | 8 | 7263 | 7270 | 0 % | 25 % | 50 % | 25 % | 258406627 |
18 | NC_013224 | TTAT | 2 | 8 | 9131 | 9138 | 25 % | 75 % | 0 % | 0 % | 258406629 |
19 | NC_013224 | AAAG | 2 | 8 | 9270 | 9277 | 75 % | 0 % | 25 % | 0 % | 258406629 |
20 | NC_013224 | GTCA | 2 | 8 | 9392 | 9399 | 25 % | 25 % | 25 % | 25 % | 258406629 |
21 | NC_013224 | GATA | 2 | 8 | 9707 | 9714 | 50 % | 25 % | 25 % | 0 % | 258406630 |
22 | NC_013224 | AGAA | 2 | 8 | 9898 | 9905 | 75 % | 0 % | 25 % | 0 % | 258406630 |
23 | NC_013224 | AAGC | 2 | 8 | 13508 | 13515 | 50 % | 0 % | 25 % | 25 % | 258406637 |
24 | NC_013224 | TGGG | 2 | 8 | 13826 | 13833 | 0 % | 25 % | 75 % | 0 % | 258406637 |
25 | NC_013224 | TGCA | 2 | 8 | 13882 | 13889 | 25 % | 25 % | 25 % | 25 % | 258406637 |
26 | NC_013224 | GGCA | 2 | 8 | 14226 | 14233 | 25 % | 0 % | 50 % | 25 % | 258406637 |
27 | NC_013224 | CCAT | 2 | 8 | 14597 | 14604 | 25 % | 25 % | 0 % | 50 % | 258406638 |
28 | NC_013224 | CTTG | 2 | 8 | 14742 | 14749 | 0 % | 50 % | 25 % | 25 % | 258406638 |
29 | NC_013224 | CAAC | 2 | 8 | 15510 | 15517 | 50 % | 0 % | 0 % | 50 % | 258406639 |
30 | NC_013224 | CAAG | 2 | 8 | 15550 | 15557 | 50 % | 0 % | 25 % | 25 % | 258406639 |
31 | NC_013224 | GCTG | 2 | 8 | 15558 | 15565 | 0 % | 25 % | 50 % | 25 % | 258406639 |
32 | NC_013224 | ATTG | 2 | 8 | 16038 | 16045 | 25 % | 50 % | 25 % | 0 % | 258406639 |
33 | NC_013224 | GGAA | 2 | 8 | 16563 | 16570 | 50 % | 0 % | 50 % | 0 % | 258406639 |
34 | NC_013224 | TTGG | 2 | 8 | 17441 | 17448 | 0 % | 50 % | 50 % | 0 % | 258406640 |
35 | NC_013224 | CCAA | 2 | 8 | 17684 | 17691 | 50 % | 0 % | 0 % | 50 % | 258406640 |
36 | NC_013224 | CGAG | 2 | 8 | 20161 | 20168 | 25 % | 0 % | 50 % | 25 % | 258406642 |
37 | NC_013224 | GCTG | 2 | 8 | 20231 | 20238 | 0 % | 25 % | 50 % | 25 % | 258406642 |
38 | NC_013224 | TCCT | 2 | 8 | 20359 | 20366 | 0 % | 50 % | 0 % | 50 % | 258406643 |
39 | NC_013224 | CAAC | 2 | 8 | 20636 | 20643 | 50 % | 0 % | 0 % | 50 % | 258406643 |
40 | NC_013224 | CATT | 2 | 8 | 20722 | 20729 | 25 % | 50 % | 0 % | 25 % | 258406643 |
41 | NC_013224 | CCTG | 2 | 8 | 21139 | 21146 | 0 % | 25 % | 25 % | 50 % | 258406644 |
42 | NC_013224 | AATG | 2 | 8 | 23044 | 23051 | 50 % | 25 % | 25 % | 0 % | 258406645 |
43 | NC_013224 | ATCA | 2 | 8 | 23361 | 23368 | 50 % | 25 % | 0 % | 25 % | 258406646 |
44 | NC_013224 | AATA | 2 | 8 | 23441 | 23448 | 75 % | 25 % | 0 % | 0 % | 258406646 |
45 | NC_013224 | ATAA | 2 | 8 | 23595 | 23602 | 75 % | 25 % | 0 % | 0 % | 258406646 |
46 | NC_013224 | TAAT | 2 | 8 | 24255 | 24262 | 50 % | 50 % | 0 % | 0 % | 258406647 |
47 | NC_013224 | AAAT | 2 | 8 | 24334 | 24341 | 75 % | 25 % | 0 % | 0 % | 258406647 |
48 | NC_013224 | TATT | 2 | 8 | 24484 | 24491 | 25 % | 75 % | 0 % | 0 % | 258406647 |
49 | NC_013224 | AAGA | 2 | 8 | 25360 | 25367 | 75 % | 0 % | 25 % | 0 % | 258406648 |
50 | NC_013224 | AGAA | 2 | 8 | 27939 | 27946 | 75 % | 0 % | 25 % | 0 % | 258406649 |
51 | NC_013224 | TCAG | 2 | 8 | 28354 | 28361 | 25 % | 25 % | 25 % | 25 % | 258406650 |
52 | NC_013224 | TAAA | 2 | 8 | 29258 | 29265 | 75 % | 25 % | 0 % | 0 % | 258406650 |
53 | NC_013224 | AAGC | 2 | 8 | 30218 | 30225 | 50 % | 0 % | 25 % | 25 % | 258406651 |
54 | NC_013224 | AATA | 2 | 8 | 32024 | 32031 | 75 % | 25 % | 0 % | 0 % | 258406652 |
55 | NC_013224 | GTGA | 2 | 8 | 32932 | 32939 | 25 % | 25 % | 50 % | 0 % | 258406653 |
56 | NC_013224 | TCGG | 2 | 8 | 34246 | 34253 | 0 % | 25 % | 50 % | 25 % | 258406654 |
57 | NC_013224 | TTCT | 2 | 8 | 35647 | 35654 | 0 % | 75 % | 0 % | 25 % | 258406656 |
58 | NC_013224 | CAAA | 2 | 8 | 35724 | 35731 | 75 % | 0 % | 0 % | 25 % | 258406656 |
59 | NC_013224 | ATCT | 2 | 8 | 35969 | 35976 | 25 % | 50 % | 0 % | 25 % | 258406657 |
60 | NC_013224 | TGGA | 2 | 8 | 36157 | 36164 | 25 % | 25 % | 50 % | 0 % | 258406657 |
61 | NC_013224 | CTGT | 2 | 8 | 36183 | 36190 | 0 % | 50 % | 25 % | 25 % | 258406657 |
62 | NC_013224 | GCAA | 2 | 8 | 36361 | 36368 | 50 % | 0 % | 25 % | 25 % | 258406657 |
63 | NC_013224 | CCTT | 2 | 8 | 36652 | 36659 | 0 % | 50 % | 0 % | 50 % | 258406657 |
64 | NC_013224 | GCCG | 2 | 8 | 36771 | 36778 | 0 % | 0 % | 50 % | 50 % | 258406657 |
65 | NC_013224 | GACG | 2 | 8 | 36935 | 36942 | 25 % | 0 % | 50 % | 25 % | 258406657 |
66 | NC_013224 | TCCC | 2 | 8 | 37347 | 37354 | 0 % | 25 % | 0 % | 75 % | 258406657 |
67 | NC_013224 | TGGA | 2 | 8 | 38679 | 38686 | 25 % | 25 % | 50 % | 0 % | 258406657 |
68 | NC_013224 | CTGA | 2 | 8 | 38874 | 38881 | 25 % | 25 % | 25 % | 25 % | 258406657 |
69 | NC_013224 | GTAG | 2 | 8 | 40750 | 40757 | 25 % | 25 % | 50 % | 0 % | 258406659 |
70 | NC_013224 | GCAG | 2 | 8 | 40837 | 40844 | 25 % | 0 % | 50 % | 25 % | 258406659 |
71 | NC_013224 | GAAA | 2 | 8 | 41028 | 41035 | 75 % | 0 % | 25 % | 0 % | 258406659 |
72 | NC_013224 | ACAA | 2 | 8 | 41150 | 41157 | 75 % | 0 % | 0 % | 25 % | 258406659 |
73 | NC_013224 | AAAG | 2 | 8 | 41569 | 41576 | 75 % | 0 % | 25 % | 0 % | 258406659 |
74 | NC_013224 | ATCA | 2 | 8 | 41864 | 41871 | 50 % | 25 % | 0 % | 25 % | 258406660 |
75 | NC_013224 | TAAA | 2 | 8 | 42633 | 42640 | 75 % | 25 % | 0 % | 0 % | 258406661 |
76 | NC_013224 | ACTA | 2 | 8 | 43373 | 43380 | 50 % | 25 % | 0 % | 25 % | 258406662 |
77 | NC_013224 | TTGG | 2 | 8 | 44112 | 44119 | 0 % | 50 % | 50 % | 0 % | 258406663 |
78 | NC_013224 | TTAT | 2 | 8 | 44139 | 44146 | 25 % | 75 % | 0 % | 0 % | 258406663 |
79 | NC_013224 | GTTT | 2 | 8 | 44202 | 44209 | 0 % | 75 % | 25 % | 0 % | 258406663 |
80 | NC_013224 | CGGG | 2 | 8 | 44340 | 44347 | 0 % | 0 % | 75 % | 25 % | 258406664 |
81 | NC_013224 | GAGG | 2 | 8 | 44400 | 44407 | 25 % | 0 % | 75 % | 0 % | 258406664 |
82 | NC_013224 | AGTT | 2 | 8 | 44508 | 44515 | 25 % | 50 % | 25 % | 0 % | 258406664 |