Hexa-nucleotide Repeats of Lactobacillus rhamnosus Lc 705 plasmid pLC1
Total Repeats: 24
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_013200 | CAATTT | 2 | 12 | 3297 | 3308 | 33.33 % | 50 % | 0 % | 16.67 % | 258509944 |
2 | NC_013200 | ATGGAA | 2 | 12 | 8033 | 8044 | 50 % | 16.67 % | 33.33 % | 0 % | 258509951 |
3 | NC_013200 | GCTTGT | 2 | 12 | 10604 | 10615 | 0 % | 50 % | 33.33 % | 16.67 % | 258509953 |
4 | NC_013200 | TGCCTC | 2 | 12 | 10694 | 10705 | 0 % | 33.33 % | 16.67 % | 50 % | 258509954 |
5 | NC_013200 | TCATCG | 2 | 12 | 10761 | 10772 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 258509954 |
6 | NC_013200 | GGCGAT | 2 | 12 | 16754 | 16765 | 16.67 % | 16.67 % | 50 % | 16.67 % | 258509963 |
7 | NC_013200 | AATTTT | 2 | 12 | 17561 | 17572 | 33.33 % | 66.67 % | 0 % | 0 % | 258509963 |
8 | NC_013200 | GCAATT | 2 | 12 | 19510 | 19521 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 258509964 |
9 | NC_013200 | TGATAC | 2 | 12 | 20986 | 20997 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 258509967 |
10 | NC_013200 | TTATCT | 2 | 12 | 24496 | 24507 | 16.67 % | 66.67 % | 0 % | 16.67 % | 258509969 |
11 | NC_013200 | AGCGAT | 2 | 12 | 24917 | 24928 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 258509969 |
12 | NC_013200 | GAACCA | 2 | 12 | 28463 | 28474 | 50 % | 0 % | 16.67 % | 33.33 % | 258509976 |
13 | NC_013200 | GTTGCG | 2 | 12 | 29608 | 29619 | 0 % | 33.33 % | 50 % | 16.67 % | 258509977 |
14 | NC_013200 | ATAATC | 2 | 12 | 29753 | 29764 | 50 % | 33.33 % | 0 % | 16.67 % | 258509977 |
15 | NC_013200 | GTTATT | 2 | 12 | 32234 | 32245 | 16.67 % | 66.67 % | 16.67 % | 0 % | 258509977 |
16 | NC_013200 | CCCATC | 2 | 12 | 34943 | 34954 | 16.67 % | 16.67 % | 0 % | 66.67 % | 258509979 |
17 | NC_013200 | TGCCGA | 2 | 12 | 35028 | 35039 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 258509979 |
18 | NC_013200 | CGTTGT | 2 | 12 | 40284 | 40295 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
19 | NC_013200 | CATGCA | 2 | 12 | 42916 | 42927 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 258509990 |
20 | NC_013200 | TGTGAA | 2 | 12 | 45475 | 45486 | 33.33 % | 33.33 % | 33.33 % | 0 % | 258509994 |
21 | NC_013200 | GAAAAA | 2 | 12 | 50094 | 50105 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
22 | NC_013200 | GATTGG | 2 | 12 | 54087 | 54098 | 16.67 % | 33.33 % | 50 % | 0 % | 258510004 |
23 | NC_013200 | TTGATT | 2 | 12 | 59267 | 59278 | 16.67 % | 66.67 % | 16.67 % | 0 % | 258510013 |
24 | NC_013200 | TTAATT | 2 | 12 | 61335 | 61346 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |