Tetra-nucleotide Repeats of Lactobacillus rhamnosus Lc 705 plasmid pLC1
Total Repeats: 144
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_013200 | ATTC | 2 | 8 | 431 | 438 | 25 % | 50 % | 0 % | 25 % | 258509941 |
2 | NC_013200 | CGAC | 2 | 8 | 1823 | 1830 | 25 % | 0 % | 25 % | 50 % | 258509942 |
3 | NC_013200 | GCTG | 2 | 8 | 3190 | 3197 | 0 % | 25 % | 50 % | 25 % | 258509943 |
4 | NC_013200 | TTGT | 2 | 8 | 3510 | 3517 | 0 % | 75 % | 25 % | 0 % | 258509944 |
5 | NC_013200 | GATT | 2 | 8 | 3560 | 3567 | 25 % | 50 % | 25 % | 0 % | 258509944 |
6 | NC_013200 | GTAT | 2 | 8 | 3934 | 3941 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
7 | NC_013200 | CTTT | 2 | 8 | 4289 | 4296 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
8 | NC_013200 | GATT | 2 | 8 | 4727 | 4734 | 25 % | 50 % | 25 % | 0 % | 258509946 |
9 | NC_013200 | TCAT | 2 | 8 | 4844 | 4851 | 25 % | 50 % | 0 % | 25 % | 258509947 |
10 | NC_013200 | AAAG | 2 | 8 | 5212 | 5219 | 75 % | 0 % | 25 % | 0 % | 258509948 |
11 | NC_013200 | TGAC | 2 | 8 | 5226 | 5233 | 25 % | 25 % | 25 % | 25 % | 258509948 |
12 | NC_013200 | TCAG | 2 | 8 | 5693 | 5700 | 25 % | 25 % | 25 % | 25 % | 258509949 |
13 | NC_013200 | CAAC | 2 | 8 | 6797 | 6804 | 50 % | 0 % | 0 % | 50 % | 258509950 |
14 | NC_013200 | TCCG | 2 | 8 | 7074 | 7081 | 0 % | 25 % | 25 % | 50 % | 258509951 |
15 | NC_013200 | GTCA | 2 | 8 | 7296 | 7303 | 25 % | 25 % | 25 % | 25 % | 258509951 |
16 | NC_013200 | TTTC | 2 | 8 | 7466 | 7473 | 0 % | 75 % | 0 % | 25 % | 258509951 |
17 | NC_013200 | AACA | 2 | 8 | 7849 | 7856 | 75 % | 0 % | 0 % | 25 % | 258509951 |
18 | NC_013200 | ATTG | 2 | 8 | 8814 | 8821 | 25 % | 50 % | 25 % | 0 % | 258509951 |
19 | NC_013200 | AACT | 2 | 8 | 8942 | 8949 | 50 % | 25 % | 0 % | 25 % | 258509951 |
20 | NC_013200 | AAAC | 2 | 8 | 9411 | 9418 | 75 % | 0 % | 0 % | 25 % | 258509951 |
21 | NC_013200 | GGCA | 2 | 8 | 9583 | 9590 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
22 | NC_013200 | GTGA | 2 | 8 | 11172 | 11179 | 25 % | 25 % | 50 % | 0 % | 258509955 |
23 | NC_013200 | ATCA | 2 | 8 | 11367 | 11374 | 50 % | 25 % | 0 % | 25 % | 258509955 |
24 | NC_013200 | TGGT | 2 | 8 | 11434 | 11441 | 0 % | 50 % | 50 % | 0 % | 258509956 |
25 | NC_013200 | GTTG | 2 | 8 | 11649 | 11656 | 0 % | 50 % | 50 % | 0 % | 258509956 |
26 | NC_013200 | CTCA | 2 | 8 | 11731 | 11738 | 25 % | 25 % | 0 % | 50 % | 258509956 |
27 | NC_013200 | ACTG | 2 | 8 | 12867 | 12874 | 25 % | 25 % | 25 % | 25 % | 258509958 |
28 | NC_013200 | TCGT | 2 | 8 | 13009 | 13016 | 0 % | 50 % | 25 % | 25 % | 258509958 |
29 | NC_013200 | AGAA | 2 | 8 | 13104 | 13111 | 75 % | 0 % | 25 % | 0 % | 258509958 |
30 | NC_013200 | TATC | 2 | 8 | 13844 | 13851 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
31 | NC_013200 | AAAT | 2 | 8 | 14227 | 14234 | 75 % | 25 % | 0 % | 0 % | 258509959 |
32 | NC_013200 | CAAA | 2 | 8 | 15068 | 15075 | 75 % | 0 % | 0 % | 25 % | 258509960 |
33 | NC_013200 | TGAT | 2 | 8 | 15104 | 15111 | 25 % | 50 % | 25 % | 0 % | 258509960 |
34 | NC_013200 | TAAG | 2 | 8 | 15606 | 15613 | 50 % | 25 % | 25 % | 0 % | 258509961 |
35 | NC_013200 | TTAA | 2 | 8 | 15847 | 15854 | 50 % | 50 % | 0 % | 0 % | 258509962 |
36 | NC_013200 | TATC | 2 | 8 | 16003 | 16010 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
37 | NC_013200 | ATGA | 2 | 8 | 16611 | 16618 | 50 % | 25 % | 25 % | 0 % | 258509963 |
38 | NC_013200 | CAAG | 2 | 8 | 16734 | 16741 | 50 % | 0 % | 25 % | 25 % | 258509963 |
39 | NC_013200 | AATG | 2 | 8 | 17735 | 17742 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
40 | NC_013200 | ATCA | 2 | 8 | 18329 | 18336 | 50 % | 25 % | 0 % | 25 % | 258509964 |
41 | NC_013200 | GAAC | 2 | 8 | 18561 | 18568 | 50 % | 0 % | 25 % | 25 % | 258509964 |
42 | NC_013200 | GCAG | 2 | 8 | 18795 | 18802 | 25 % | 0 % | 50 % | 25 % | 258509964 |
43 | NC_013200 | AATG | 2 | 8 | 18933 | 18940 | 50 % | 25 % | 25 % | 0 % | 258509964 |
44 | NC_013200 | TGTA | 2 | 8 | 19026 | 19033 | 25 % | 50 % | 25 % | 0 % | 258509964 |
45 | NC_013200 | ATAG | 2 | 8 | 19612 | 19619 | 50 % | 25 % | 25 % | 0 % | 258509964 |
46 | NC_013200 | CAAG | 2 | 8 | 19844 | 19851 | 50 % | 0 % | 25 % | 25 % | 258509965 |
47 | NC_013200 | GAAA | 2 | 8 | 20411 | 20418 | 75 % | 0 % | 25 % | 0 % | 258509966 |
48 | NC_013200 | TCTT | 2 | 8 | 20950 | 20957 | 0 % | 75 % | 0 % | 25 % | 258509967 |
49 | NC_013200 | TTGC | 2 | 8 | 21081 | 21088 | 0 % | 50 % | 25 % | 25 % | 258509967 |
50 | NC_013200 | ATTG | 2 | 8 | 21248 | 21255 | 25 % | 50 % | 25 % | 0 % | 258509967 |
51 | NC_013200 | TGGT | 2 | 8 | 21461 | 21468 | 0 % | 50 % | 50 % | 0 % | 258509967 |
52 | NC_013200 | CAAG | 2 | 8 | 21652 | 21659 | 50 % | 0 % | 25 % | 25 % | 258509968 |
53 | NC_013200 | TACC | 2 | 8 | 22387 | 22394 | 25 % | 25 % | 0 % | 50 % | 258509968 |
54 | NC_013200 | GTAC | 2 | 8 | 23092 | 23099 | 25 % | 25 % | 25 % | 25 % | 258509968 |
55 | NC_013200 | TGCG | 2 | 8 | 23310 | 23317 | 0 % | 25 % | 50 % | 25 % | 258509968 |
56 | NC_013200 | TTAT | 2 | 8 | 23742 | 23749 | 25 % | 75 % | 0 % | 0 % | 258509968 |
57 | NC_013200 | ACGA | 2 | 8 | 23777 | 23784 | 50 % | 0 % | 25 % | 25 % | 258509968 |
58 | NC_013200 | CTTA | 2 | 8 | 24125 | 24132 | 25 % | 50 % | 0 % | 25 % | 258509968 |
59 | NC_013200 | TTGG | 2 | 8 | 24397 | 24404 | 0 % | 50 % | 50 % | 0 % | 258509969 |
60 | NC_013200 | GCAC | 2 | 8 | 25292 | 25299 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
61 | NC_013200 | AATC | 2 | 8 | 27711 | 27718 | 50 % | 25 % | 0 % | 25 % | 258509976 |
62 | NC_013200 | AATA | 2 | 8 | 27916 | 27923 | 75 % | 25 % | 0 % | 0 % | 258509976 |
63 | NC_013200 | CCTT | 2 | 8 | 28058 | 28065 | 0 % | 50 % | 0 % | 50 % | 258509976 |
64 | NC_013200 | TAAG | 2 | 8 | 28273 | 28280 | 50 % | 25 % | 25 % | 0 % | 258509976 |
65 | NC_013200 | ATTC | 2 | 8 | 28363 | 28370 | 25 % | 50 % | 0 % | 25 % | 258509976 |
66 | NC_013200 | ATAG | 2 | 8 | 28486 | 28493 | 50 % | 25 % | 25 % | 0 % | 258509976 |
67 | NC_013200 | AGAT | 2 | 8 | 28789 | 28796 | 50 % | 25 % | 25 % | 0 % | 258509976 |
68 | NC_013200 | AATT | 2 | 8 | 29594 | 29601 | 50 % | 50 % | 0 % | 0 % | 258509977 |
69 | NC_013200 | AATT | 2 | 8 | 29738 | 29745 | 50 % | 50 % | 0 % | 0 % | 258509977 |
70 | NC_013200 | ATTT | 2 | 8 | 30362 | 30369 | 25 % | 75 % | 0 % | 0 % | 258509977 |
71 | NC_013200 | CAAA | 2 | 8 | 31521 | 31528 | 75 % | 0 % | 0 % | 25 % | 258509977 |
72 | NC_013200 | ATTA | 2 | 8 | 31931 | 31938 | 50 % | 50 % | 0 % | 0 % | 258509977 |
73 | NC_013200 | ATTG | 2 | 8 | 32314 | 32321 | 25 % | 50 % | 25 % | 0 % | 258509977 |
74 | NC_013200 | GCTA | 2 | 8 | 32665 | 32672 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
75 | NC_013200 | CTTG | 2 | 8 | 33792 | 33799 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
76 | NC_013200 | TCAA | 2 | 8 | 34052 | 34059 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
77 | NC_013200 | TCTA | 2 | 8 | 34230 | 34237 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
78 | NC_013200 | TTAT | 2 | 8 | 34300 | 34307 | 25 % | 75 % | 0 % | 0 % | 258509979 |
79 | NC_013200 | ATTC | 2 | 8 | 34312 | 34319 | 25 % | 50 % | 0 % | 25 % | 258509979 |
80 | NC_013200 | TGAT | 2 | 8 | 34349 | 34356 | 25 % | 50 % | 25 % | 0 % | 258509979 |
81 | NC_013200 | GATT | 2 | 8 | 35543 | 35550 | 25 % | 50 % | 25 % | 0 % | 258509980 |
82 | NC_013200 | CCAA | 2 | 8 | 35662 | 35669 | 50 % | 0 % | 0 % | 50 % | 258509980 |
83 | NC_013200 | TATC | 2 | 8 | 36019 | 36026 | 25 % | 50 % | 0 % | 25 % | 258509980 |
84 | NC_013200 | GGAC | 2 | 8 | 36141 | 36148 | 25 % | 0 % | 50 % | 25 % | 258509980 |
85 | NC_013200 | CATT | 2 | 8 | 36747 | 36754 | 25 % | 50 % | 0 % | 25 % | 258509981 |
86 | NC_013200 | CAAT | 2 | 8 | 38521 | 38528 | 50 % | 25 % | 0 % | 25 % | 258509984 |
87 | NC_013200 | TCGC | 2 | 8 | 39320 | 39327 | 0 % | 25 % | 25 % | 50 % | 258509986 |
88 | NC_013200 | AATT | 2 | 8 | 39734 | 39741 | 50 % | 50 % | 0 % | 0 % | 258509987 |
89 | NC_013200 | TCAA | 2 | 8 | 40742 | 40749 | 50 % | 25 % | 0 % | 25 % | 258509989 |
90 | NC_013200 | CCAA | 2 | 8 | 41986 | 41993 | 50 % | 0 % | 0 % | 50 % | 258509989 |
91 | NC_013200 | GGCG | 2 | 8 | 42438 | 42445 | 0 % | 0 % | 75 % | 25 % | 258509990 |
92 | NC_013200 | GGCT | 2 | 8 | 42837 | 42844 | 0 % | 25 % | 50 % | 25 % | 258509990 |
93 | NC_013200 | CATT | 2 | 8 | 43222 | 43229 | 25 % | 50 % | 0 % | 25 % | 258509990 |
94 | NC_013200 | AATT | 2 | 8 | 43236 | 43243 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
95 | NC_013200 | TTTG | 2 | 8 | 43436 | 43443 | 0 % | 75 % | 25 % | 0 % | 258509991 |
96 | NC_013200 | AACA | 2 | 8 | 43565 | 43572 | 75 % | 0 % | 0 % | 25 % | 258509991 |
97 | NC_013200 | AACT | 2 | 8 | 43631 | 43638 | 50 % | 25 % | 0 % | 25 % | 258509991 |
98 | NC_013200 | CATA | 2 | 8 | 45466 | 45473 | 50 % | 25 % | 0 % | 25 % | 258509994 |
99 | NC_013200 | TGAT | 2 | 8 | 45828 | 45835 | 25 % | 50 % | 25 % | 0 % | 258509994 |
100 | NC_013200 | AGCA | 2 | 8 | 46640 | 46647 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
101 | NC_013200 | TACT | 2 | 8 | 46872 | 46879 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
102 | NC_013200 | CTGA | 2 | 8 | 47553 | 47560 | 25 % | 25 % | 25 % | 25 % | 258509996 |
103 | NC_013200 | AACT | 2 | 8 | 47590 | 47597 | 50 % | 25 % | 0 % | 25 % | 258509996 |
104 | NC_013200 | GTCG | 2 | 8 | 47688 | 47695 | 0 % | 25 % | 50 % | 25 % | 258509996 |
105 | NC_013200 | TAAA | 2 | 8 | 48547 | 48554 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
106 | NC_013200 | TTTG | 2 | 8 | 48727 | 48734 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
107 | NC_013200 | TTGT | 2 | 8 | 49836 | 49843 | 0 % | 75 % | 25 % | 0 % | 258510001 |
108 | NC_013200 | TGGA | 2 | 8 | 50079 | 50086 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
109 | NC_013200 | TTTG | 2 | 8 | 50174 | 50181 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
110 | NC_013200 | CAGG | 2 | 8 | 50626 | 50633 | 25 % | 0 % | 50 % | 25 % | 258510002 |
111 | NC_013200 | CGAC | 2 | 8 | 50943 | 50950 | 25 % | 0 % | 25 % | 50 % | 258510002 |
112 | NC_013200 | TGAG | 2 | 8 | 51083 | 51090 | 25 % | 25 % | 50 % | 0 % | 258510002 |
113 | NC_013200 | ACGA | 2 | 8 | 51092 | 51099 | 50 % | 0 % | 25 % | 25 % | 258510002 |
114 | NC_013200 | TGAC | 2 | 8 | 51554 | 51561 | 25 % | 25 % | 25 % | 25 % | 258510003 |
115 | NC_013200 | CAGG | 2 | 8 | 52084 | 52091 | 25 % | 0 % | 50 % | 25 % | 258510003 |
116 | NC_013200 | CATT | 2 | 8 | 52508 | 52515 | 25 % | 50 % | 0 % | 25 % | 258510003 |
117 | NC_013200 | CAAA | 2 | 8 | 52713 | 52720 | 75 % | 0 % | 0 % | 25 % | 258510003 |
118 | NC_013200 | AAAC | 2 | 8 | 52785 | 52792 | 75 % | 0 % | 0 % | 25 % | 258510003 |
119 | NC_013200 | AAAG | 2 | 8 | 54198 | 54205 | 75 % | 0 % | 25 % | 0 % | 258510004 |
120 | NC_013200 | GATT | 2 | 8 | 54254 | 54261 | 25 % | 50 % | 25 % | 0 % | 258510004 |
121 | NC_013200 | CAAA | 2 | 8 | 54425 | 54432 | 75 % | 0 % | 0 % | 25 % | 258510004 |
122 | NC_013200 | TGAG | 2 | 8 | 54454 | 54461 | 25 % | 25 % | 50 % | 0 % | 258510004 |
123 | NC_013200 | TGGT | 2 | 8 | 54556 | 54563 | 0 % | 50 % | 50 % | 0 % | 258510005 |
124 | NC_013200 | TGCA | 2 | 8 | 54607 | 54614 | 25 % | 25 % | 25 % | 25 % | 258510005 |
125 | NC_013200 | CAAC | 2 | 8 | 54695 | 54702 | 50 % | 0 % | 0 % | 50 % | 258510005 |
126 | NC_013200 | ACCA | 2 | 8 | 56386 | 56393 | 50 % | 0 % | 0 % | 50 % | 258510010 |
127 | NC_013200 | TCTT | 2 | 8 | 56659 | 56666 | 0 % | 75 % | 0 % | 25 % | 258510011 |
128 | NC_013200 | GTCA | 2 | 8 | 56958 | 56965 | 25 % | 25 % | 25 % | 25 % | 258510011 |
129 | NC_013200 | TCTG | 2 | 8 | 57371 | 57378 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
130 | NC_013200 | ACGA | 2 | 8 | 58262 | 58269 | 50 % | 0 % | 25 % | 25 % | 258510012 |
131 | NC_013200 | AGTT | 2 | 8 | 59280 | 59287 | 25 % | 50 % | 25 % | 0 % | 258510013 |
132 | NC_013200 | ATTG | 2 | 8 | 59321 | 59328 | 25 % | 50 % | 25 % | 0 % | 258510013 |
133 | NC_013200 | ATAA | 2 | 8 | 60246 | 60253 | 75 % | 25 % | 0 % | 0 % | 258510013 |
134 | NC_013200 | CAAT | 2 | 8 | 60467 | 60474 | 50 % | 25 % | 0 % | 25 % | 258510013 |
135 | NC_013200 | TTCC | 2 | 8 | 60924 | 60931 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
136 | NC_013200 | AGAA | 2 | 8 | 61502 | 61509 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
137 | NC_013200 | AGTA | 2 | 8 | 61690 | 61697 | 50 % | 25 % | 25 % | 0 % | 258510014 |
138 | NC_013200 | CAAG | 2 | 8 | 61747 | 61754 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
139 | NC_013200 | TTGG | 2 | 8 | 62017 | 62024 | 0 % | 50 % | 50 % | 0 % | 258510016 |
140 | NC_013200 | TGGC | 2 | 8 | 62937 | 62944 | 0 % | 25 % | 50 % | 25 % | 258510018 |
141 | NC_013200 | CCCA | 2 | 8 | 63645 | 63652 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
142 | NC_013200 | ATTG | 2 | 8 | 63767 | 63774 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
143 | NC_013200 | GTCC | 2 | 8 | 64068 | 64075 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
144 | NC_013200 | TAAA | 2 | 8 | 64441 | 64448 | 75 % | 25 % | 0 % | 0 % | Non-Coding |