Hexa-nucleotide Non-Coding Repeats of Lactobacillus rhamnosus Lc 705 chromosome
Total Repeats: 143
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_013199 | CTATTA | 2 | 12 | 1463 | 1474 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
2 | NC_013199 | TAAAGG | 2 | 12 | 32761 | 32772 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
3 | NC_013199 | TGATCT | 2 | 12 | 100197 | 100208 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
4 | NC_013199 | GCTCAC | 2 | 12 | 191120 | 191131 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
5 | NC_013199 | GCTCAC | 2 | 12 | 234514 | 234525 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
6 | NC_013199 | TGGCGA | 2 | 12 | 250783 | 250794 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
7 | NC_013199 | AATCGT | 2 | 12 | 272135 | 272146 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
8 | NC_013199 | CTGACA | 2 | 12 | 280327 | 280338 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
9 | NC_013199 | CGGAGC | 2 | 12 | 292224 | 292235 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
10 | NC_013199 | TGGAAG | 2 | 12 | 294420 | 294431 | 33.33 % | 16.67 % | 50 % | 0 % | Non-Coding |
11 | NC_013199 | GTAGTT | 2 | 12 | 306685 | 306696 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
12 | NC_013199 | GCTCAC | 2 | 12 | 333032 | 333043 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
13 | NC_013199 | GCTCAC | 2 | 12 | 333154 | 333165 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
14 | NC_013199 | AATATT | 2 | 12 | 349923 | 349934 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
15 | NC_013199 | TTTAAA | 2 | 12 | 375272 | 375283 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
16 | NC_013199 | GATACT | 2 | 12 | 396103 | 396114 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
17 | NC_013199 | CATTGA | 2 | 12 | 427231 | 427242 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
18 | NC_013199 | TGACTT | 2 | 12 | 430110 | 430121 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
19 | NC_013199 | CAAAGA | 2 | 12 | 430268 | 430279 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
20 | NC_013199 | AATATC | 2 | 12 | 465116 | 465127 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
21 | NC_013199 | TATCGA | 2 | 12 | 479647 | 479658 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
22 | NC_013199 | CTCTAT | 2 | 12 | 485352 | 485363 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
23 | NC_013199 | GAAAAA | 2 | 12 | 497660 | 497671 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
24 | NC_013199 | AAAACA | 2 | 12 | 512818 | 512829 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
25 | NC_013199 | AAGGTA | 2 | 12 | 520645 | 520656 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
26 | NC_013199 | TGAAAA | 2 | 12 | 526262 | 526273 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
27 | NC_013199 | CGGCAG | 2 | 12 | 567894 | 567905 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
28 | NC_013199 | TAACAA | 2 | 12 | 568251 | 568262 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
29 | NC_013199 | CAAGGT | 2 | 12 | 572630 | 572641 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
30 | NC_013199 | CAAGGA | 2 | 12 | 588407 | 588418 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
31 | NC_013199 | GTGAGC | 2 | 12 | 598574 | 598585 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
32 | NC_013199 | CGATTA | 2 | 12 | 644446 | 644457 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
33 | NC_013199 | TGAGCA | 2 | 12 | 678666 | 678677 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
34 | NC_013199 | GCTCAC | 2 | 12 | 687306 | 687317 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
35 | NC_013199 | TCGCAG | 2 | 12 | 687328 | 687339 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
36 | NC_013199 | TCGCAG | 2 | 12 | 687577 | 687588 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
37 | NC_013199 | TTATAA | 2 | 12 | 705396 | 705407 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
38 | NC_013199 | ATTTTT | 2 | 12 | 716794 | 716805 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
39 | NC_013199 | GTTTTT | 2 | 12 | 776328 | 776339 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
40 | NC_013199 | GTTCTG | 2 | 12 | 797610 | 797621 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
41 | NC_013199 | ATTTTC | 2 | 12 | 797653 | 797664 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
42 | NC_013199 | GGAATT | 2 | 12 | 817417 | 817428 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
43 | NC_013199 | CGGAGC | 2 | 12 | 820241 | 820252 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
44 | NC_013199 | TGGAAG | 2 | 12 | 822437 | 822448 | 33.33 % | 16.67 % | 50 % | 0 % | Non-Coding |
45 | NC_013199 | TCGCTT | 2 | 12 | 825631 | 825642 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
46 | NC_013199 | TATACT | 2 | 12 | 828738 | 828749 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
47 | NC_013199 | CGGAGC | 2 | 12 | 840265 | 840276 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
48 | NC_013199 | TGGAAG | 2 | 12 | 842461 | 842472 | 33.33 % | 16.67 % | 50 % | 0 % | Non-Coding |
49 | NC_013199 | TCCATT | 2 | 12 | 854258 | 854269 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
50 | NC_013199 | AAACAA | 2 | 12 | 900577 | 900588 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
51 | NC_013199 | GCTCAC | 2 | 12 | 904737 | 904748 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
52 | NC_013199 | CAGAAG | 2 | 12 | 939981 | 939992 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
53 | NC_013199 | TTTCTG | 2 | 12 | 960911 | 960922 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
54 | NC_013199 | GCTCAC | 2 | 12 | 967365 | 967376 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
55 | NC_013199 | TCGCAG | 2 | 12 | 985493 | 985504 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
56 | NC_013199 | ATTTTA | 2 | 12 | 1007755 | 1007766 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
57 | NC_013199 | ATTTAA | 2 | 12 | 1035414 | 1035425 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
58 | NC_013199 | TTATAA | 2 | 12 | 1059011 | 1059022 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
59 | NC_013199 | ATAGTC | 2 | 12 | 1064905 | 1064916 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
60 | NC_013199 | TAATGA | 2 | 12 | 1066578 | 1066589 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
61 | NC_013199 | AATGAA | 2 | 12 | 1082516 | 1082527 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
62 | NC_013199 | ATCAGT | 2 | 12 | 1088588 | 1088599 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
63 | NC_013199 | AGCTGC | 2 | 12 | 1103101 | 1103112 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
64 | NC_013199 | GCTCAC | 2 | 12 | 1106073 | 1106084 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
65 | NC_013199 | GCTCAC | 2 | 12 | 1115093 | 1115104 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
66 | NC_013199 | TAAAAT | 2 | 12 | 1129100 | 1129111 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
67 | NC_013199 | CCAGCC | 2 | 12 | 1138080 | 1138091 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
68 | NC_013199 | GGCTGC | 2 | 12 | 1154681 | 1154692 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
69 | NC_013199 | TAAAGT | 2 | 12 | 1159824 | 1159835 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
70 | NC_013199 | GCTCAC | 2 | 12 | 1192288 | 1192299 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
71 | NC_013199 | TGGGTG | 2 | 12 | 1211876 | 1211887 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
72 | NC_013199 | GTGAGC | 2 | 12 | 1213981 | 1213992 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
73 | NC_013199 | ACTTCG | 2 | 12 | 1217644 | 1217655 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
74 | NC_013199 | GCTCAC | 2 | 12 | 1279553 | 1279564 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
75 | NC_013199 | TCACAC | 2 | 12 | 1373521 | 1373532 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
76 | NC_013199 | GATAGT | 2 | 12 | 1392866 | 1392877 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
77 | NC_013199 | CGGTCT | 2 | 12 | 1402710 | 1402721 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
78 | NC_013199 | ATCAAT | 2 | 12 | 1414945 | 1414956 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
79 | NC_013199 | GCTCAC | 2 | 12 | 1430144 | 1430155 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
80 | NC_013199 | GGTTGA | 2 | 12 | 1501526 | 1501537 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
81 | NC_013199 | TGCAGA | 2 | 12 | 1502222 | 1502233 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
82 | NC_013199 | GTGAGC | 2 | 12 | 1521803 | 1521814 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
83 | NC_013199 | CATCAA | 2 | 12 | 1549024 | 1549035 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
84 | NC_013199 | CTGTGA | 2 | 12 | 1553023 | 1553034 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
85 | NC_013199 | CGCCCA | 2 | 12 | 1553118 | 1553129 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
86 | NC_013199 | ACTACC | 2 | 12 | 1596785 | 1596796 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
87 | NC_013199 | GTTAAC | 2 | 12 | 1608297 | 1608308 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
88 | NC_013199 | ACTGTC | 2 | 12 | 1630647 | 1630658 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
89 | NC_013199 | CCTGCC | 2 | 12 | 1689280 | 1689291 | 0 % | 16.67 % | 16.67 % | 66.67 % | Non-Coding |
90 | NC_013199 | TATTTT | 2 | 12 | 1697823 | 1697834 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
91 | NC_013199 | GCTTTT | 2 | 12 | 1756531 | 1756542 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
92 | NC_013199 | GTGAGC | 2 | 12 | 1839689 | 1839700 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
93 | NC_013199 | GTGAGC | 2 | 12 | 1841887 | 1841898 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
94 | NC_013199 | ACGTTT | 2 | 12 | 1845173 | 1845184 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
95 | NC_013199 | GCTCAC | 2 | 12 | 1880943 | 1880954 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
96 | NC_013199 | CACTTC | 2 | 12 | 1892385 | 1892396 | 16.67 % | 33.33 % | 0 % | 50 % | Non-Coding |
97 | NC_013199 | GCTCCG | 2 | 12 | 1894583 | 1894594 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
98 | NC_013199 | GCTCAC | 2 | 12 | 1918824 | 1918835 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
99 | NC_013199 | GTGAGC | 2 | 12 | 1924736 | 1924747 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
100 | NC_013199 | TGCACA | 2 | 12 | 1952610 | 1952621 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
101 | NC_013199 | AGTTGC | 2 | 12 | 1972422 | 1972433 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
102 | NC_013199 | CAGCCA | 2 | 12 | 2039345 | 2039356 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
103 | NC_013199 | GGTTTT | 2 | 12 | 2054441 | 2054452 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
104 | NC_013199 | ATCAAT | 2 | 12 | 2096619 | 2096630 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
105 | NC_013199 | GTATCG | 2 | 12 | 2101347 | 2101358 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
106 | NC_013199 | GCTCAC | 2 | 12 | 2109618 | 2109629 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
107 | NC_013199 | TCATTT | 2 | 12 | 2188088 | 2188099 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
108 | NC_013199 | GCTCAC | 2 | 12 | 2206512 | 2206523 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
109 | NC_013199 | GCTTGT | 2 | 12 | 2207568 | 2207579 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
110 | NC_013199 | TCGCAG | 2 | 12 | 2242492 | 2242503 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
111 | NC_013199 | GCCATA | 2 | 12 | 2270404 | 2270415 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
112 | NC_013199 | AAAAGA | 2 | 12 | 2322891 | 2322902 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
113 | NC_013199 | GTTGCA | 2 | 12 | 2341105 | 2341116 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
114 | NC_013199 | GATTTA | 2 | 12 | 2369705 | 2369716 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
115 | NC_013199 | GTGAGC | 2 | 12 | 2401756 | 2401767 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
116 | NC_013199 | CCTGCT | 2 | 12 | 2402028 | 2402039 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
117 | NC_013199 | GCAACT | 2 | 12 | 2438497 | 2438508 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
118 | NC_013199 | CCGACA | 2 | 12 | 2463402 | 2463413 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
119 | NC_013199 | CAGAAT | 2 | 12 | 2472277 | 2472288 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
120 | NC_013199 | TTGATG | 2 | 12 | 2484180 | 2484191 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
121 | NC_013199 | CTGCGA | 2 | 12 | 2494472 | 2494483 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
122 | NC_013199 | TTTGAC | 2 | 12 | 2543778 | 2543789 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
123 | NC_013199 | CACTTC | 2 | 12 | 2545053 | 2545064 | 16.67 % | 33.33 % | 0 % | 50 % | Non-Coding |
124 | NC_013199 | GCTCCG | 2 | 12 | 2547251 | 2547262 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
125 | NC_013199 | TTGTGA | 2 | 12 | 2589196 | 2589207 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
126 | NC_013199 | GCTTAT | 2 | 12 | 2590239 | 2590250 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
127 | NC_013199 | AAAAAC | 2 | 12 | 2594480 | 2594491 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
128 | NC_013199 | TCCATA | 2 | 12 | 2639375 | 2639386 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
129 | NC_013199 | CAGTTT | 2 | 12 | 2641736 | 2641747 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
130 | NC_013199 | TAGCAT | 2 | 12 | 2649529 | 2649540 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
131 | NC_013199 | ATGCTT | 2 | 12 | 2670267 | 2670278 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
132 | NC_013199 | CAGCAT | 2 | 12 | 2689975 | 2689986 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
133 | NC_013199 | CAGCAT | 2 | 12 | 2748492 | 2748503 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
134 | NC_013199 | TCTGCT | 2 | 12 | 2787539 | 2787550 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
135 | NC_013199 | ATCAAA | 2 | 12 | 2827086 | 2827097 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
136 | NC_013199 | TCGCAG | 3 | 18 | 2867994 | 2868011 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
137 | NC_013199 | CGATTA | 2 | 12 | 2880786 | 2880797 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
138 | NC_013199 | CCGTTC | 2 | 12 | 2880817 | 2880828 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
139 | NC_013199 | TTCGTC | 2 | 12 | 2917278 | 2917289 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
140 | NC_013199 | GAAAAA | 2 | 12 | 2926749 | 2926760 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
141 | NC_013199 | ATTTTT | 2 | 12 | 2928884 | 2928895 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
142 | NC_013199 | TAACAT | 2 | 12 | 2949367 | 2949378 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
143 | NC_013199 | AACGAC | 2 | 12 | 2967072 | 2967083 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |