Penta-nucleotide Non-Coding Repeats of Ralstonia pickettii 12D chromosome 2
Total Repeats: 160
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_012857 | AGCGA | 2 | 10 | 1524 | 1533 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
2 | NC_012857 | GAATT | 2 | 10 | 10107 | 10116 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
3 | NC_012857 | GGCGT | 2 | 10 | 27799 | 27808 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
4 | NC_012857 | CCCCA | 2 | 10 | 37156 | 37165 | 20 % | 0 % | 0 % | 80 % | Non-Coding |
5 | NC_012857 | CGACA | 2 | 10 | 37183 | 37192 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
6 | NC_012857 | GCGGA | 2 | 10 | 41931 | 41940 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
7 | NC_012857 | CACGC | 2 | 10 | 43975 | 43984 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
8 | NC_012857 | TGCCC | 2 | 10 | 46902 | 46911 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
9 | NC_012857 | TTTTG | 2 | 10 | 47534 | 47543 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
10 | NC_012857 | GGATA | 3 | 15 | 54444 | 54458 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
11 | NC_012857 | TGCGC | 2 | 10 | 59350 | 59359 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
12 | NC_012857 | CATCA | 2 | 10 | 59502 | 59511 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
13 | NC_012857 | AACCG | 2 | 10 | 59604 | 59613 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
14 | NC_012857 | CCATT | 2 | 10 | 61393 | 61402 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
15 | NC_012857 | CACCT | 2 | 10 | 67739 | 67748 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
16 | NC_012857 | TGCCG | 2 | 10 | 75051 | 75060 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
17 | NC_012857 | GCCAC | 2 | 10 | 77496 | 77505 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
18 | NC_012857 | GCCCA | 2 | 10 | 77780 | 77789 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
19 | NC_012857 | CAATA | 2 | 10 | 78729 | 78738 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
20 | NC_012857 | CATCG | 2 | 10 | 78981 | 78990 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
21 | NC_012857 | CTGAT | 2 | 10 | 99721 | 99730 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
22 | NC_012857 | CTGCA | 2 | 10 | 99764 | 99773 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
23 | NC_012857 | ACAGC | 2 | 10 | 104548 | 104557 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
24 | NC_012857 | CGGCA | 2 | 10 | 123713 | 123722 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
25 | NC_012857 | GCGCC | 2 | 10 | 138804 | 138813 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
26 | NC_012857 | GCCAT | 2 | 10 | 175268 | 175277 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
27 | NC_012857 | CCGGG | 2 | 10 | 182640 | 182649 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
28 | NC_012857 | AAACC | 2 | 10 | 182716 | 182725 | 60 % | 0 % | 0 % | 40 % | Non-Coding |
29 | NC_012857 | ACCGC | 2 | 10 | 182748 | 182757 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
30 | NC_012857 | GTCGG | 2 | 10 | 188116 | 188125 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
31 | NC_012857 | GCGCG | 2 | 10 | 188597 | 188606 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
32 | NC_012857 | GGGAG | 2 | 10 | 202344 | 202353 | 20 % | 0 % | 80 % | 0 % | Non-Coding |
33 | NC_012857 | CCGCA | 2 | 10 | 234607 | 234616 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
34 | NC_012857 | GCGCC | 2 | 10 | 259263 | 259272 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
35 | NC_012857 | ATTCT | 2 | 10 | 275970 | 275979 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
36 | NC_012857 | CGATG | 2 | 10 | 279930 | 279939 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
37 | NC_012857 | ACGCA | 2 | 10 | 281929 | 281938 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
38 | NC_012857 | GTTCT | 2 | 10 | 299717 | 299726 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
39 | NC_012857 | CCCTC | 2 | 10 | 300407 | 300416 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
40 | NC_012857 | ACCCG | 2 | 10 | 315505 | 315514 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
41 | NC_012857 | TGCAA | 2 | 10 | 330932 | 330941 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
42 | NC_012857 | ACGCC | 2 | 10 | 331191 | 331200 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
43 | NC_012857 | GGCGC | 2 | 10 | 331414 | 331423 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
44 | NC_012857 | CGCGC | 2 | 10 | 340568 | 340577 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
45 | NC_012857 | CTAGC | 2 | 10 | 357262 | 357271 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
46 | NC_012857 | CAGAT | 2 | 10 | 359948 | 359957 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
47 | NC_012857 | CCTAG | 2 | 10 | 361241 | 361250 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
48 | NC_012857 | CGGTT | 2 | 10 | 407026 | 407035 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
49 | NC_012857 | GACAG | 2 | 10 | 412336 | 412345 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
50 | NC_012857 | ACGGG | 2 | 10 | 413667 | 413676 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
51 | NC_012857 | TGCCC | 2 | 10 | 440700 | 440709 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
52 | NC_012857 | AGCGA | 2 | 10 | 440765 | 440774 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
53 | NC_012857 | CTTTT | 2 | 10 | 446041 | 446050 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
54 | NC_012857 | GGTGG | 2 | 10 | 448057 | 448066 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
55 | NC_012857 | TCGGT | 2 | 10 | 449569 | 449578 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
56 | NC_012857 | AGGCA | 2 | 10 | 464344 | 464353 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
57 | NC_012857 | CTTTT | 2 | 10 | 470539 | 470548 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
58 | NC_012857 | CAACG | 2 | 10 | 506203 | 506212 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
59 | NC_012857 | GATTC | 2 | 10 | 513254 | 513263 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
60 | NC_012857 | AACTA | 2 | 10 | 521739 | 521748 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
61 | NC_012857 | GCCCC | 2 | 10 | 530325 | 530334 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
62 | NC_012857 | GGCTG | 2 | 10 | 550150 | 550159 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
63 | NC_012857 | TGCAA | 2 | 10 | 551433 | 551442 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
64 | NC_012857 | TCGCT | 2 | 10 | 555480 | 555489 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
65 | NC_012857 | GTGGG | 2 | 10 | 556809 | 556818 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
66 | NC_012857 | GCCGC | 2 | 10 | 557898 | 557907 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
67 | NC_012857 | GCGCA | 3 | 15 | 560675 | 560689 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
68 | NC_012857 | GCGCA | 2 | 10 | 566456 | 566465 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
69 | NC_012857 | GGGAA | 2 | 10 | 569193 | 569202 | 40 % | 0 % | 60 % | 0 % | Non-Coding |
70 | NC_012857 | GCCAG | 2 | 10 | 571663 | 571672 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
71 | NC_012857 | GCCCA | 2 | 10 | 571681 | 571690 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
72 | NC_012857 | GGTGA | 2 | 10 | 572259 | 572268 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
73 | NC_012857 | CGGCA | 2 | 10 | 573510 | 573519 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
74 | NC_012857 | GTGTT | 2 | 10 | 576592 | 576601 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
75 | NC_012857 | GCGTT | 2 | 10 | 576602 | 576611 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
76 | NC_012857 | GCTTG | 2 | 10 | 576643 | 576652 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
77 | NC_012857 | CATCA | 2 | 10 | 583870 | 583879 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
78 | NC_012857 | AAGCA | 2 | 10 | 586141 | 586150 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
79 | NC_012857 | GCAAA | 2 | 10 | 609436 | 609445 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
80 | NC_012857 | GCCGC | 2 | 10 | 614734 | 614743 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
81 | NC_012857 | CATGC | 2 | 10 | 615500 | 615509 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
82 | NC_012857 | TCGCT | 2 | 10 | 631273 | 631282 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
83 | NC_012857 | AGCGA | 2 | 10 | 631531 | 631540 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
84 | NC_012857 | ACGAT | 2 | 10 | 643091 | 643100 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
85 | NC_012857 | CAACC | 2 | 10 | 643121 | 643130 | 40 % | 0 % | 0 % | 60 % | Non-Coding |
86 | NC_012857 | AAAAC | 2 | 10 | 648171 | 648180 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
87 | NC_012857 | GCGAA | 2 | 10 | 663866 | 663875 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
88 | NC_012857 | TGTGA | 2 | 10 | 667143 | 667152 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
89 | NC_012857 | CGGTT | 2 | 10 | 671536 | 671545 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
90 | NC_012857 | CGGCG | 2 | 10 | 712411 | 712420 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
91 | NC_012857 | CCGTC | 2 | 10 | 714284 | 714293 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
92 | NC_012857 | TCGCT | 2 | 10 | 722314 | 722323 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
93 | NC_012857 | CCGGC | 2 | 10 | 740745 | 740754 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
94 | NC_012857 | TTTCC | 2 | 10 | 753855 | 753864 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
95 | NC_012857 | CGTCG | 2 | 10 | 754277 | 754286 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
96 | NC_012857 | ATCCG | 2 | 10 | 754504 | 754513 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
97 | NC_012857 | TGGCG | 2 | 10 | 802357 | 802366 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
98 | NC_012857 | GGCGG | 2 | 10 | 813126 | 813135 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
99 | NC_012857 | CAAGC | 2 | 10 | 824061 | 824070 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
100 | NC_012857 | GTTTG | 2 | 10 | 826705 | 826714 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
101 | NC_012857 | CCGTT | 2 | 10 | 831549 | 831558 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
102 | NC_012857 | CAGGC | 2 | 10 | 841539 | 841548 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
103 | NC_012857 | GGCGG | 2 | 10 | 853969 | 853978 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
104 | NC_012857 | GCTTC | 2 | 10 | 865178 | 865187 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
105 | NC_012857 | CCTGC | 2 | 10 | 872556 | 872565 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
106 | NC_012857 | GCCGC | 2 | 10 | 873075 | 873084 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
107 | NC_012857 | CTTCC | 2 | 10 | 873448 | 873457 | 0 % | 40 % | 0 % | 60 % | Non-Coding |
108 | NC_012857 | GTGCG | 2 | 10 | 873551 | 873560 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
109 | NC_012857 | AGCGA | 2 | 10 | 879462 | 879471 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
110 | NC_012857 | TCGCT | 2 | 10 | 920520 | 920529 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
111 | NC_012857 | CCCGA | 2 | 10 | 944700 | 944709 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
112 | NC_012857 | GTTGG | 2 | 10 | 957495 | 957504 | 0 % | 40 % | 60 % | 0 % | Non-Coding |
113 | NC_012857 | GAATT | 2 | 10 | 969008 | 969017 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
114 | NC_012857 | ATGGG | 2 | 10 | 969080 | 969089 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
115 | NC_012857 | TTCTT | 2 | 10 | 969192 | 969201 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
116 | NC_012857 | GCGCG | 2 | 10 | 988314 | 988323 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
117 | NC_012857 | CCGGC | 2 | 10 | 997491 | 997500 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
118 | NC_012857 | GTAAA | 2 | 10 | 1003776 | 1003785 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
119 | NC_012857 | GGCGG | 2 | 10 | 1021064 | 1021073 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
120 | NC_012857 | GTTGG | 2 | 10 | 1033925 | 1033934 | 0 % | 40 % | 60 % | 0 % | Non-Coding |
121 | NC_012857 | GCGCA | 2 | 10 | 1036159 | 1036168 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
122 | NC_012857 | GCAAT | 2 | 10 | 1036304 | 1036313 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
123 | NC_012857 | ACCGA | 2 | 10 | 1036490 | 1036499 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
124 | NC_012857 | ATGGG | 2 | 10 | 1037137 | 1037146 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
125 | NC_012857 | CAGGG | 2 | 10 | 1042864 | 1042873 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
126 | NC_012857 | ACGCA | 2 | 10 | 1044329 | 1044338 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
127 | NC_012857 | CATCA | 2 | 10 | 1047373 | 1047382 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
128 | NC_012857 | GCAGG | 2 | 10 | 1053694 | 1053703 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
129 | NC_012857 | ATCTG | 2 | 10 | 1061322 | 1061331 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
130 | NC_012857 | TCCAT | 2 | 10 | 1061381 | 1061390 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
131 | NC_012857 | GAAGC | 2 | 10 | 1064279 | 1064288 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
132 | NC_012857 | CGCGC | 2 | 10 | 1112497 | 1112506 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
133 | NC_012857 | TAACA | 2 | 10 | 1112683 | 1112692 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
134 | NC_012857 | TTCGA | 2 | 10 | 1117787 | 1117796 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
135 | NC_012857 | GCCGC | 2 | 10 | 1119039 | 1119048 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
136 | NC_012857 | CGGGT | 2 | 10 | 1119102 | 1119111 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
137 | NC_012857 | GAGCT | 2 | 10 | 1128305 | 1128314 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
138 | NC_012857 | CAGCG | 2 | 10 | 1152639 | 1152648 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
139 | NC_012857 | CTCGA | 2 | 10 | 1156926 | 1156935 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
140 | NC_012857 | GCAGC | 2 | 10 | 1166180 | 1166189 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
141 | NC_012857 | TGCAA | 2 | 10 | 1182100 | 1182109 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
142 | NC_012857 | ATCCG | 2 | 10 | 1209952 | 1209961 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
143 | NC_012857 | TCTGT | 2 | 10 | 1240291 | 1240300 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
144 | NC_012857 | ACCCC | 2 | 10 | 1252072 | 1252081 | 20 % | 0 % | 0 % | 80 % | Non-Coding |
145 | NC_012857 | CCACG | 2 | 10 | 1252659 | 1252668 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
146 | NC_012857 | GGTGT | 2 | 10 | 1256790 | 1256799 | 0 % | 40 % | 60 % | 0 % | Non-Coding |
147 | NC_012857 | GACAA | 2 | 10 | 1256809 | 1256818 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
148 | NC_012857 | CAAAA | 2 | 10 | 1263710 | 1263719 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
149 | NC_012857 | ATGCG | 2 | 10 | 1269248 | 1269257 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
150 | NC_012857 | GCGAC | 2 | 10 | 1271576 | 1271585 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
151 | NC_012857 | CGGGT | 2 | 10 | 1273639 | 1273648 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
152 | NC_012857 | TGCCG | 2 | 10 | 1274047 | 1274056 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
153 | NC_012857 | GATGA | 2 | 10 | 1280732 | 1280741 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
154 | NC_012857 | CTCCC | 2 | 10 | 1282731 | 1282740 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
155 | NC_012857 | CACGA | 2 | 10 | 1284198 | 1284207 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
156 | NC_012857 | ACAGC | 2 | 10 | 1286044 | 1286053 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
157 | NC_012857 | AACAA | 2 | 10 | 1287590 | 1287599 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
158 | NC_012857 | CCGCC | 2 | 10 | 1293335 | 1293344 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
159 | NC_012857 | CGCTT | 2 | 10 | 1304900 | 1304909 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
160 | NC_012857 | CGCAC | 2 | 10 | 1306779 | 1306788 | 20 % | 0 % | 20 % | 60 % | Non-Coding |