Hexa-nucleotide Non-Coding Repeats of Ralstonia pickettii 12D chromosome 1
Total Repeats: 120
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_012856 | CGAAAA | 2 | 12 | 42849 | 42860 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
2 | NC_012856 | CGCCTT | 2 | 12 | 48293 | 48304 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
3 | NC_012856 | CAGAAA | 2 | 12 | 78339 | 78350 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
4 | NC_012856 | CAAACC | 2 | 12 | 103024 | 103035 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
5 | NC_012856 | ATTGTT | 2 | 12 | 116543 | 116554 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
6 | NC_012856 | TTTTTG | 2 | 12 | 160241 | 160252 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
7 | NC_012856 | TGAAGA | 2 | 12 | 175726 | 175737 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
8 | NC_012856 | GGCGCC | 2 | 12 | 202821 | 202832 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
9 | NC_012856 | GCACGG | 2 | 12 | 210284 | 210295 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
10 | NC_012856 | TCGACA | 2 | 12 | 230173 | 230184 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
11 | NC_012856 | CATGCA | 2 | 12 | 267862 | 267873 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
12 | NC_012856 | CAATTC | 2 | 12 | 278336 | 278347 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
13 | NC_012856 | TCTTTC | 2 | 12 | 389982 | 389993 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
14 | NC_012856 | CTGCCG | 2 | 12 | 408191 | 408202 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
15 | NC_012856 | TTTCGA | 2 | 12 | 427501 | 427512 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
16 | NC_012856 | ACGATG | 2 | 12 | 439974 | 439985 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
17 | NC_012856 | ACGCGA | 2 | 12 | 485427 | 485438 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
18 | NC_012856 | CGGCGC | 2 | 12 | 518167 | 518178 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
19 | NC_012856 | GCGGTC | 2 | 12 | 542579 | 542590 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
20 | NC_012856 | CCTCAA | 2 | 12 | 548151 | 548162 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
21 | NC_012856 | CACGCT | 2 | 12 | 556436 | 556447 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
22 | NC_012856 | GCGGAC | 2 | 12 | 592204 | 592215 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
23 | NC_012856 | GCATTC | 2 | 12 | 613442 | 613453 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
24 | NC_012856 | CGTTCG | 2 | 12 | 641456 | 641467 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
25 | NC_012856 | GGCTGT | 2 | 12 | 677550 | 677561 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
26 | NC_012856 | CGGTGC | 2 | 12 | 682690 | 682701 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
27 | NC_012856 | CTCCGG | 2 | 12 | 789950 | 789961 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
28 | NC_012856 | TGGATG | 2 | 12 | 835114 | 835125 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
29 | NC_012856 | ATGGGG | 2 | 12 | 862897 | 862908 | 16.67 % | 16.67 % | 66.67 % | 0 % | Non-Coding |
30 | NC_012856 | CGTTAT | 2 | 12 | 937356 | 937367 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
31 | NC_012856 | GGCAAC | 2 | 12 | 954580 | 954591 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
32 | NC_012856 | TGTCGC | 2 | 12 | 955151 | 955162 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
33 | NC_012856 | GCGTGC | 2 | 12 | 972637 | 972648 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
34 | NC_012856 | ACGCCG | 2 | 12 | 1011891 | 1011902 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
35 | NC_012856 | TGGCGT | 2 | 12 | 1018564 | 1018575 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
36 | NC_012856 | GCTCCG | 2 | 12 | 1029626 | 1029637 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
37 | NC_012856 | GCCTCC | 2 | 12 | 1053924 | 1053935 | 0 % | 16.67 % | 16.67 % | 66.67 % | Non-Coding |
38 | NC_012856 | GGCGCA | 2 | 12 | 1054500 | 1054511 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
39 | NC_012856 | CGCCGG | 2 | 12 | 1070477 | 1070488 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
40 | NC_012856 | CGTGCC | 2 | 12 | 1070730 | 1070741 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
41 | NC_012856 | CGTTTT | 2 | 12 | 1079938 | 1079949 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
42 | NC_012856 | GCGTCG | 2 | 12 | 1080974 | 1080985 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
43 | NC_012856 | GGTGCA | 2 | 12 | 1084553 | 1084564 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
44 | NC_012856 | CGCGGC | 2 | 12 | 1220909 | 1220920 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
45 | NC_012856 | TCCCGA | 2 | 12 | 1236061 | 1236072 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
46 | NC_012856 | GATTGG | 2 | 12 | 1253374 | 1253385 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
47 | NC_012856 | CGCCAA | 2 | 12 | 1365806 | 1365817 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
48 | NC_012856 | AGGGGC | 2 | 12 | 1366762 | 1366773 | 16.67 % | 0 % | 66.67 % | 16.67 % | Non-Coding |
49 | NC_012856 | TTCTGT | 2 | 12 | 1516197 | 1516208 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
50 | NC_012856 | ATTTTT | 2 | 12 | 1571073 | 1571084 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
51 | NC_012856 | TGCCGC | 2 | 12 | 1583495 | 1583506 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
52 | NC_012856 | CTTGGC | 2 | 12 | 1600838 | 1600849 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
53 | NC_012856 | TCCGGC | 2 | 12 | 1621407 | 1621418 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
54 | NC_012856 | CCGAAG | 2 | 12 | 1668179 | 1668190 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
55 | NC_012856 | CACTGC | 2 | 12 | 1699561 | 1699572 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
56 | NC_012856 | TTATGT | 2 | 12 | 1765108 | 1765119 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
57 | NC_012856 | TCAAAT | 2 | 12 | 1774289 | 1774300 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
58 | NC_012856 | GGCGAA | 3 | 18 | 1811558 | 1811575 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
59 | NC_012856 | GCTTCA | 2 | 12 | 1824185 | 1824196 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
60 | NC_012856 | CGGCCC | 2 | 12 | 1903907 | 1903918 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
61 | NC_012856 | GTTGCA | 2 | 12 | 1914401 | 1914412 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
62 | NC_012856 | AGGCCG | 2 | 12 | 1962802 | 1962813 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
63 | NC_012856 | CTTGCA | 4 | 24 | 1978399 | 1978422 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
64 | NC_012856 | CTCGCA | 6 | 36 | 1978423 | 1978458 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
65 | NC_012856 | TGTGAA | 2 | 12 | 2024694 | 2024705 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
66 | NC_012856 | GCCGGA | 2 | 12 | 2080650 | 2080661 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
67 | NC_012856 | GTTCTA | 2 | 12 | 2081947 | 2081958 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
68 | NC_012856 | GCGCTC | 2 | 12 | 2090016 | 2090027 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
69 | NC_012856 | GCGGGA | 2 | 12 | 2099711 | 2099722 | 16.67 % | 0 % | 66.67 % | 16.67 % | Non-Coding |
70 | NC_012856 | AAGAAA | 2 | 12 | 2155980 | 2155991 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
71 | NC_012856 | CTTCAC | 2 | 12 | 2158872 | 2158883 | 16.67 % | 33.33 % | 0 % | 50 % | Non-Coding |
72 | NC_012856 | GCGCCG | 2 | 12 | 2217240 | 2217251 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
73 | NC_012856 | CGTTCT | 2 | 12 | 2222671 | 2222682 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
74 | NC_012856 | GCCGTC | 2 | 12 | 2223281 | 2223292 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
75 | NC_012856 | GGAAGG | 2 | 12 | 2334939 | 2334950 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
76 | NC_012856 | AGTCAA | 2 | 12 | 2413823 | 2413834 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
77 | NC_012856 | GCAAGA | 2 | 12 | 2442039 | 2442050 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
78 | NC_012856 | GGCACC | 2 | 12 | 2500811 | 2500822 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
79 | NC_012856 | TGACGA | 2 | 12 | 2506828 | 2506839 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
80 | NC_012856 | TCCCGC | 2 | 12 | 2516263 | 2516274 | 0 % | 16.67 % | 16.67 % | 66.67 % | Non-Coding |
81 | NC_012856 | GCAACA | 2 | 12 | 2516645 | 2516656 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |
82 | NC_012856 | GCAAAC | 3 | 18 | 2540570 | 2540587 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |
83 | NC_012856 | CCGGCG | 2 | 12 | 2567649 | 2567660 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
84 | NC_012856 | ACTTTT | 2 | 12 | 2616331 | 2616342 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
85 | NC_012856 | GACGTT | 2 | 12 | 2621860 | 2621871 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
86 | NC_012856 | CCCTCC | 2 | 12 | 2627423 | 2627434 | 0 % | 16.67 % | 0 % | 83.33 % | Non-Coding |
87 | NC_012856 | TGCCGT | 2 | 12 | 2637663 | 2637674 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
88 | NC_012856 | GCGCCG | 2 | 12 | 2681761 | 2681772 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
89 | NC_012856 | CCGCGC | 2 | 12 | 2681802 | 2681813 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
90 | NC_012856 | GACAAG | 2 | 12 | 2789223 | 2789234 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
91 | NC_012856 | GCCGGA | 2 | 12 | 2829331 | 2829342 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
92 | NC_012856 | GCGAAG | 2 | 12 | 2830079 | 2830090 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
93 | NC_012856 | TGGCAA | 2 | 12 | 2837627 | 2837638 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
94 | NC_012856 | TAAAAA | 2 | 12 | 2846800 | 2846811 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
95 | NC_012856 | CCCGCC | 2 | 12 | 2849938 | 2849949 | 0 % | 0 % | 16.67 % | 83.33 % | Non-Coding |
96 | NC_012856 | TCTCCC | 2 | 12 | 2852990 | 2853001 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
97 | NC_012856 | CCTGGC | 2 | 12 | 2921219 | 2921230 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
98 | NC_012856 | TCGACT | 2 | 12 | 2927570 | 2927581 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
99 | NC_012856 | CGCGAT | 2 | 12 | 2942182 | 2942193 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
100 | NC_012856 | GGCGCT | 2 | 12 | 2960910 | 2960921 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
101 | NC_012856 | CGAACG | 2 | 12 | 2989735 | 2989746 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
102 | NC_012856 | CTGCGG | 2 | 12 | 2999749 | 2999760 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
103 | NC_012856 | AAAAAG | 2 | 12 | 3069615 | 3069626 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
104 | NC_012856 | GGGTTT | 2 | 12 | 3224566 | 3224577 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
105 | NC_012856 | CCGCCT | 2 | 12 | 3224670 | 3224681 | 0 % | 16.67 % | 16.67 % | 66.67 % | Non-Coding |
106 | NC_012856 | AACCAA | 3 | 18 | 3225939 | 3225956 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
107 | NC_012856 | ACTGCA | 4 | 24 | 3274769 | 3274792 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
108 | NC_012856 | TCTCTT | 2 | 12 | 3284212 | 3284223 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
109 | NC_012856 | ACGGCC | 2 | 12 | 3291908 | 3291919 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
110 | NC_012856 | CCTTCC | 2 | 12 | 3317807 | 3317818 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
111 | NC_012856 | AAAACC | 2 | 12 | 3328883 | 3328894 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
112 | NC_012856 | CCGCCT | 2 | 12 | 3341016 | 3341027 | 0 % | 16.67 % | 16.67 % | 66.67 % | Non-Coding |
113 | NC_012856 | CAAAAA | 2 | 12 | 3341147 | 3341158 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
114 | NC_012856 | CAAGTC | 3 | 18 | 3353755 | 3353772 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
115 | NC_012856 | GTTCTT | 2 | 12 | 3397802 | 3397813 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
116 | NC_012856 | CTGCCG | 2 | 12 | 3443912 | 3443923 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
117 | NC_012856 | TGCGCC | 2 | 12 | 3503095 | 3503106 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
118 | NC_012856 | GAGGCC | 2 | 12 | 3530373 | 3530384 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
119 | NC_012856 | GCATCG | 2 | 12 | 3566481 | 3566492 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
120 | NC_012856 | GGCAGC | 2 | 12 | 3581197 | 3581208 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |