Hexa-nucleotide Repeats of Ralstonia pickettii 12D plasmid pRp12D02
Total Repeats: 125
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_012849 | CAAAGT | 2 | 12 | 1211 | 1222 | 50 % | 16.67 % | 16.67 % | 16.67 % | 241114101 |
2 | NC_012849 | ACGTTC | 2 | 12 | 1354 | 1365 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 241114101 |
3 | NC_012849 | ATGCAA | 2 | 12 | 4831 | 4842 | 50 % | 16.67 % | 16.67 % | 16.67 % | 241114104 |
4 | NC_012849 | TTGCGT | 2 | 12 | 5434 | 5445 | 0 % | 50 % | 33.33 % | 16.67 % | 241114104 |
5 | NC_012849 | CTTCCA | 2 | 12 | 8138 | 8149 | 16.67 % | 33.33 % | 0 % | 50 % | 241114108 |
6 | NC_012849 | TGCCGC | 2 | 12 | 11044 | 11055 | 0 % | 16.67 % | 33.33 % | 50 % | 241114110 |
7 | NC_012849 | GGCGCT | 2 | 12 | 16137 | 16148 | 0 % | 16.67 % | 50 % | 33.33 % | 241114116 |
8 | NC_012849 | CCGCAA | 2 | 12 | 17891 | 17902 | 33.33 % | 0 % | 16.67 % | 50 % | 241114118 |
9 | NC_012849 | GCCCCA | 2 | 12 | 18059 | 18070 | 16.67 % | 0 % | 16.67 % | 66.67 % | 241114118 |
10 | NC_012849 | CAGCGC | 2 | 12 | 20663 | 20674 | 16.67 % | 0 % | 33.33 % | 50 % | 241114121 |
11 | NC_012849 | CAGGTT | 2 | 12 | 21719 | 21730 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 241114121 |
12 | NC_012849 | CCAGCA | 2 | 12 | 21787 | 21798 | 33.33 % | 0 % | 16.67 % | 50 % | 241114121 |
13 | NC_012849 | CAGCGT | 2 | 12 | 22136 | 22147 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 241114121 |
14 | NC_012849 | TCTCGA | 2 | 12 | 23323 | 23334 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 241114121 |
15 | NC_012849 | GCTCAT | 2 | 12 | 27286 | 27297 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 241114122 |
16 | NC_012849 | GAGAGC | 2 | 12 | 30110 | 30121 | 33.33 % | 0 % | 50 % | 16.67 % | 241114130 |
17 | NC_012849 | TGGGAA | 2 | 12 | 30934 | 30945 | 33.33 % | 16.67 % | 50 % | 0 % | 241114130 |
18 | NC_012849 | CTCGCG | 2 | 12 | 32934 | 32945 | 0 % | 16.67 % | 33.33 % | 50 % | 241114134 |
19 | NC_012849 | TGCCGC | 2 | 12 | 33452 | 33463 | 0 % | 16.67 % | 33.33 % | 50 % | 241114134 |
20 | NC_012849 | GGCGCA | 2 | 12 | 33881 | 33892 | 16.67 % | 0 % | 50 % | 33.33 % | 241114134 |
21 | NC_012849 | CGCAGG | 2 | 12 | 34096 | 34107 | 16.67 % | 0 % | 50 % | 33.33 % | 241114134 |
22 | NC_012849 | GCTGAG | 2 | 12 | 34679 | 34690 | 16.67 % | 16.67 % | 50 % | 16.67 % | 241114135 |
23 | NC_012849 | GCCGGT | 2 | 12 | 34942 | 34953 | 0 % | 16.67 % | 50 % | 33.33 % | 241114135 |
24 | NC_012849 | GAACCT | 2 | 12 | 37104 | 37115 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 241114136 |
25 | NC_012849 | AGTTCA | 2 | 12 | 37829 | 37840 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 241114136 |
26 | NC_012849 | GAACCC | 2 | 12 | 38536 | 38547 | 33.33 % | 0 % | 16.67 % | 50 % | 241114136 |
27 | NC_012849 | GCTCAA | 2 | 12 | 42020 | 42031 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 241114141 |
28 | NC_012849 | TGCGCG | 2 | 12 | 44531 | 44542 | 0 % | 16.67 % | 50 % | 33.33 % | 241114143 |
29 | NC_012849 | AGAAGC | 2 | 12 | 49832 | 49843 | 50 % | 0 % | 33.33 % | 16.67 % | 241114146 |
30 | NC_012849 | CGCTGG | 2 | 12 | 50253 | 50264 | 0 % | 16.67 % | 50 % | 33.33 % | 241114147 |
31 | NC_012849 | ACGTGC | 2 | 12 | 50973 | 50984 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 241114147 |
32 | NC_012849 | GCCAGC | 2 | 12 | 53509 | 53520 | 16.67 % | 0 % | 33.33 % | 50 % | 241114150 |
33 | NC_012849 | TGCCAC | 2 | 12 | 55825 | 55836 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
34 | NC_012849 | GGAGCG | 2 | 12 | 59659 | 59670 | 16.67 % | 0 % | 66.67 % | 16.67 % | 241114158 |
35 | NC_012849 | CGCCTT | 2 | 12 | 63621 | 63632 | 0 % | 33.33 % | 16.67 % | 50 % | 241114164 |
36 | NC_012849 | CACGGC | 2 | 12 | 65335 | 65346 | 16.67 % | 0 % | 33.33 % | 50 % | 241114165 |
37 | NC_012849 | GGGGAT | 2 | 12 | 66715 | 66726 | 16.67 % | 16.67 % | 66.67 % | 0 % | 241114165 |
38 | NC_012849 | TCGATC | 2 | 12 | 67471 | 67482 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 241114166 |
39 | NC_012849 | CCTTGC | 2 | 12 | 70474 | 70485 | 0 % | 33.33 % | 16.67 % | 50 % | 241114169 |
40 | NC_012849 | GTCTTT | 2 | 12 | 73620 | 73631 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
41 | NC_012849 | TTGTCT | 2 | 12 | 77462 | 77473 | 0 % | 66.67 % | 16.67 % | 16.67 % | 241114173 |
42 | NC_012849 | ATCGAG | 2 | 12 | 80480 | 80491 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 241114178 |
43 | NC_012849 | TGGCCT | 2 | 12 | 83270 | 83281 | 0 % | 33.33 % | 33.33 % | 33.33 % | 241114181 |
44 | NC_012849 | TGAGCG | 2 | 12 | 83380 | 83391 | 16.67 % | 16.67 % | 50 % | 16.67 % | 241114181 |
45 | NC_012849 | CAGGGC | 2 | 12 | 84586 | 84597 | 16.67 % | 0 % | 50 % | 33.33 % | 241114182 |
46 | NC_012849 | AGGTTG | 2 | 12 | 86634 | 86645 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
47 | NC_012849 | CCGTCG | 2 | 12 | 89996 | 90007 | 0 % | 16.67 % | 33.33 % | 50 % | 241114187 |
48 | NC_012849 | GCCGCG | 2 | 12 | 91018 | 91029 | 0 % | 0 % | 50 % | 50 % | 241114188 |
49 | NC_012849 | ACTGTC | 2 | 12 | 96205 | 96216 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 241114194 |
50 | NC_012849 | TGTCTA | 2 | 12 | 100960 | 100971 | 16.67 % | 50 % | 16.67 % | 16.67 % | 241114198 |
51 | NC_012849 | ATCGCC | 2 | 12 | 102726 | 102737 | 16.67 % | 16.67 % | 16.67 % | 50 % | 241114201 |
52 | NC_012849 | CACCGC | 2 | 12 | 105670 | 105681 | 16.67 % | 0 % | 16.67 % | 66.67 % | 241114203 |
53 | NC_012849 | TGGCGG | 2 | 12 | 106247 | 106258 | 0 % | 16.67 % | 66.67 % | 16.67 % | 241114204 |
54 | NC_012849 | TGGACA | 2 | 12 | 107094 | 107105 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 241114206 |
55 | NC_012849 | GCAGAT | 2 | 12 | 112080 | 112091 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 241114211 |
56 | NC_012849 | TGCCGG | 2 | 12 | 114080 | 114091 | 0 % | 16.67 % | 50 % | 33.33 % | 241114214 |
57 | NC_012849 | AGGCGA | 2 | 12 | 114333 | 114344 | 33.33 % | 0 % | 50 % | 16.67 % | 241114215 |
58 | NC_012849 | TCGGAC | 2 | 12 | 114346 | 114357 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 241114215 |
59 | NC_012849 | CAATGG | 2 | 12 | 115491 | 115502 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 241114216 |
60 | NC_012849 | CCAGAG | 2 | 12 | 118099 | 118110 | 33.33 % | 0 % | 33.33 % | 33.33 % | 241114218 |
61 | NC_012849 | TGCCGG | 4 | 24 | 119076 | 119099 | 0 % | 16.67 % | 50 % | 33.33 % | 241114218 |
62 | NC_012849 | GGCGCG | 2 | 12 | 121338 | 121349 | 0 % | 0 % | 66.67 % | 33.33 % | 241114222 |
63 | NC_012849 | CGCTGG | 2 | 12 | 122048 | 122059 | 0 % | 16.67 % | 50 % | 33.33 % | 241114223 |
64 | NC_012849 | TTGCCG | 2 | 12 | 122457 | 122468 | 0 % | 33.33 % | 33.33 % | 33.33 % | 241114223 |
65 | NC_012849 | CACCGG | 2 | 12 | 124410 | 124421 | 16.67 % | 0 % | 33.33 % | 50 % | 241114225 |
66 | NC_012849 | CAGCAC | 2 | 12 | 126714 | 126725 | 33.33 % | 0 % | 16.67 % | 50 % | 241114227 |
67 | NC_012849 | CTCGCC | 2 | 12 | 129935 | 129946 | 0 % | 16.67 % | 16.67 % | 66.67 % | 241114230 |
68 | NC_012849 | CGCCGG | 2 | 12 | 131976 | 131987 | 0 % | 0 % | 50 % | 50 % | 241114233 |
69 | NC_012849 | ATCGAT | 2 | 12 | 132260 | 132271 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 241114233 |
70 | NC_012849 | CAGCGA | 2 | 12 | 139252 | 139263 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
71 | NC_012849 | GGTGCT | 2 | 12 | 142588 | 142599 | 0 % | 33.33 % | 50 % | 16.67 % | 241114244 |
72 | NC_012849 | ATCGAC | 2 | 12 | 148794 | 148805 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 241114256 |
73 | NC_012849 | TGAAGG | 2 | 12 | 149485 | 149496 | 33.33 % | 16.67 % | 50 % | 0 % | 241114256 |
74 | NC_012849 | GGCGCT | 2 | 12 | 151978 | 151989 | 0 % | 16.67 % | 50 % | 33.33 % | 241114259 |
75 | NC_012849 | GCAGGT | 2 | 12 | 152881 | 152892 | 16.67 % | 16.67 % | 50 % | 16.67 % | 241114259 |
76 | NC_012849 | CTTTTT | 2 | 12 | 153814 | 153825 | 0 % | 83.33 % | 0 % | 16.67 % | 241114261 |
77 | NC_012849 | GATGGG | 2 | 12 | 157378 | 157389 | 16.67 % | 16.67 % | 66.67 % | 0 % | 241114268 |
78 | NC_012849 | CAAGCT | 2 | 12 | 163389 | 163400 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 241114273 |
79 | NC_012849 | CGACCG | 2 | 12 | 166350 | 166361 | 16.67 % | 0 % | 33.33 % | 50 % | 241114275 |
80 | NC_012849 | CGTCAT | 2 | 12 | 174675 | 174686 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 241114281 |
81 | NC_012849 | GGCGAT | 2 | 12 | 176867 | 176878 | 16.67 % | 16.67 % | 50 % | 16.67 % | 241114282 |
82 | NC_012849 | GGAACA | 2 | 12 | 176989 | 177000 | 50 % | 0 % | 33.33 % | 16.67 % | 241114282 |
83 | NC_012849 | GTGGCT | 2 | 12 | 178923 | 178934 | 0 % | 33.33 % | 50 % | 16.67 % | 241114283 |
84 | NC_012849 | GCACGG | 2 | 12 | 180562 | 180573 | 16.67 % | 0 % | 50 % | 33.33 % | 241114284 |
85 | NC_012849 | GCGAGC | 2 | 12 | 180865 | 180876 | 16.67 % | 0 % | 50 % | 33.33 % | 241114284 |
86 | NC_012849 | ACGCGG | 2 | 12 | 181458 | 181469 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
87 | NC_012849 | TGCGCT | 2 | 12 | 181617 | 181628 | 0 % | 33.33 % | 33.33 % | 33.33 % | 241114286 |
88 | NC_012849 | CAACAT | 2 | 12 | 183735 | 183746 | 50 % | 16.67 % | 0 % | 33.33 % | 241114288 |
89 | NC_012849 | GGCTCG | 2 | 12 | 185206 | 185217 | 0 % | 16.67 % | 50 % | 33.33 % | 241114288 |
90 | NC_012849 | CGATGA | 2 | 12 | 188895 | 188906 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 241114293 |
91 | NC_012849 | CTGGTG | 2 | 12 | 190346 | 190357 | 0 % | 33.33 % | 50 % | 16.67 % | 241114295 |
92 | NC_012849 | GTGGCG | 2 | 12 | 191713 | 191724 | 0 % | 16.67 % | 66.67 % | 16.67 % | 241114297 |
93 | NC_012849 | TGAGCT | 2 | 12 | 197198 | 197209 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 241114300 |
94 | NC_012849 | TGCCGC | 2 | 12 | 197506 | 197517 | 0 % | 16.67 % | 33.33 % | 50 % | 241114301 |
95 | NC_012849 | CGGTCA | 2 | 12 | 197810 | 197821 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 241114301 |
96 | NC_012849 | TCCTTC | 2 | 12 | 204453 | 204464 | 0 % | 50 % | 0 % | 50 % | 241114309 |
97 | NC_012849 | CGCAGT | 2 | 12 | 209726 | 209737 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
98 | NC_012849 | ACCTTG | 2 | 12 | 210117 | 210128 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
99 | NC_012849 | TTGCGT | 2 | 12 | 210209 | 210220 | 0 % | 50 % | 33.33 % | 16.67 % | 241114314 |
100 | NC_012849 | GCCGTT | 2 | 12 | 211296 | 211307 | 0 % | 33.33 % | 33.33 % | 33.33 % | 241114316 |
101 | NC_012849 | CGGCTG | 2 | 12 | 217026 | 217037 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
102 | NC_012849 | ATTGGG | 2 | 12 | 217712 | 217723 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
103 | NC_012849 | GGCTGT | 2 | 12 | 218939 | 218950 | 0 % | 33.33 % | 50 % | 16.67 % | 241114323 |
104 | NC_012849 | GATCGC | 2 | 12 | 220194 | 220205 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 241114323 |
105 | NC_012849 | GCAGGG | 2 | 12 | 220386 | 220397 | 16.67 % | 0 % | 66.67 % | 16.67 % | 241114323 |
106 | NC_012849 | GCCCAG | 2 | 12 | 225041 | 225052 | 16.67 % | 0 % | 33.33 % | 50 % | 241114327 |
107 | NC_012849 | CAGCAA | 2 | 12 | 225655 | 225666 | 50 % | 0 % | 16.67 % | 33.33 % | 241114328 |
108 | NC_012849 | GTCGCC | 2 | 12 | 236071 | 236082 | 0 % | 16.67 % | 33.33 % | 50 % | 241114341 |
109 | NC_012849 | GCTGCA | 2 | 12 | 239695 | 239706 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 241114343 |
110 | NC_012849 | GATGGT | 2 | 12 | 241179 | 241190 | 16.67 % | 33.33 % | 50 % | 0 % | 241114345 |
111 | NC_012849 | CGTCAT | 2 | 12 | 244027 | 244038 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 241114347 |
112 | NC_012849 | TGGCGC | 2 | 12 | 244808 | 244819 | 0 % | 16.67 % | 50 % | 33.33 % | 241114348 |
113 | NC_012849 | GGCGAT | 2 | 12 | 246222 | 246233 | 16.67 % | 16.67 % | 50 % | 16.67 % | 241114348 |
114 | NC_012849 | GGAACA | 2 | 12 | 246344 | 246355 | 50 % | 0 % | 33.33 % | 16.67 % | 241114348 |
115 | NC_012849 | CGGCCA | 2 | 12 | 249084 | 249095 | 16.67 % | 0 % | 33.33 % | 50 % | 241114350 |
116 | NC_012849 | TGGGCC | 2 | 12 | 249278 | 249289 | 0 % | 16.67 % | 50 % | 33.33 % | 241114350 |
117 | NC_012849 | TTGTCC | 2 | 12 | 250527 | 250538 | 0 % | 50 % | 16.67 % | 33.33 % | 241114351 |
118 | NC_012849 | GCCCAG | 2 | 12 | 252553 | 252564 | 16.67 % | 0 % | 33.33 % | 50 % | 241114353 |
119 | NC_012849 | GCGCTT | 2 | 12 | 254815 | 254826 | 0 % | 33.33 % | 33.33 % | 33.33 % | 241114355 |
120 | NC_012849 | GATGCA | 2 | 12 | 255006 | 255017 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 241114355 |
121 | NC_012849 | GGGCAT | 2 | 12 | 258170 | 258181 | 16.67 % | 16.67 % | 50 % | 16.67 % | 241114359 |
122 | NC_012849 | GTACCG | 2 | 12 | 269062 | 269073 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 241114370 |
123 | NC_012849 | TGCCCG | 2 | 12 | 269129 | 269140 | 0 % | 16.67 % | 33.33 % | 50 % | 241114370 |
124 | NC_012849 | ATTCTC | 2 | 12 | 269386 | 269397 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
125 | NC_012849 | TAGCGG | 2 | 12 | 271819 | 271830 | 16.67 % | 16.67 % | 50 % | 16.67 % | 241114374 |