Penta-nucleotide Repeats of Desulfovibrio magneticus RS-1 plasmid pDMC1
Total Repeats: 55
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_012797 | CACGG | 2 | 10 | 2 | 11 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
2 | NC_012797 | GGCAG | 2 | 10 | 1864 | 1873 | 20 % | 0 % | 60 % | 20 % | 239835336 |
3 | NC_012797 | AAGTA | 2 | 10 | 2334 | 2343 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
4 | NC_012797 | TTGTC | 2 | 10 | 2361 | 2370 | 0 % | 60 % | 20 % | 20 % | 239835337 |
5 | NC_012797 | CTATC | 2 | 10 | 2776 | 2785 | 20 % | 40 % | 0 % | 40 % | 239835337 |
6 | NC_012797 | CGACG | 2 | 10 | 3064 | 3073 | 20 % | 0 % | 40 % | 40 % | 239835337 |
7 | NC_012797 | GCTTG | 2 | 10 | 3655 | 3664 | 0 % | 40 % | 40 % | 20 % | 239835337 |
8 | NC_012797 | CTTGC | 2 | 10 | 4122 | 4131 | 0 % | 40 % | 20 % | 40 % | 239835338 |
9 | NC_012797 | TTGGC | 2 | 10 | 4910 | 4919 | 0 % | 40 % | 40 % | 20 % | 239835339 |
10 | NC_012797 | CGCCA | 2 | 10 | 8000 | 8009 | 20 % | 0 % | 20 % | 60 % | 239835344 |
11 | NC_012797 | ACCCA | 2 | 10 | 10777 | 10786 | 40 % | 0 % | 0 % | 60 % | 239835347 |
12 | NC_012797 | TGAAC | 2 | 10 | 11126 | 11135 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
13 | NC_012797 | TAAAA | 2 | 10 | 11570 | 11579 | 80 % | 20 % | 0 % | 0 % | 239835349 |
14 | NC_012797 | GATGC | 2 | 10 | 11787 | 11796 | 20 % | 20 % | 40 % | 20 % | 239835349 |
15 | NC_012797 | ATAAA | 2 | 10 | 12289 | 12298 | 80 % | 20 % | 0 % | 0 % | 239835349 |
16 | NC_012797 | AGACG | 2 | 10 | 12981 | 12990 | 40 % | 0 % | 40 % | 20 % | 239835350 |
17 | NC_012797 | CTGGG | 2 | 10 | 13592 | 13601 | 0 % | 20 % | 60 % | 20 % | 239835350 |
18 | NC_012797 | ATTTT | 2 | 10 | 13845 | 13854 | 20 % | 80 % | 0 % | 0 % | 239835350 |
19 | NC_012797 | AAGAA | 2 | 10 | 16019 | 16028 | 80 % | 0 % | 20 % | 0 % | 239835351 |
20 | NC_012797 | AATTC | 2 | 10 | 16262 | 16271 | 40 % | 40 % | 0 % | 20 % | 239835351 |
21 | NC_012797 | TTGTT | 2 | 10 | 16780 | 16789 | 0 % | 80 % | 20 % | 0 % | 239835351 |
22 | NC_012797 | TTGGC | 2 | 10 | 17572 | 17581 | 0 % | 40 % | 40 % | 20 % | 239835352 |
23 | NC_012797 | GCGTC | 2 | 10 | 18247 | 18256 | 0 % | 20 % | 40 % | 40 % | 239835354 |
24 | NC_012797 | CTGGC | 2 | 10 | 18698 | 18707 | 0 % | 20 % | 40 % | 40 % | 239835355 |
25 | NC_012797 | GCCGG | 2 | 10 | 19696 | 19705 | 0 % | 0 % | 60 % | 40 % | 239835356 |
26 | NC_012797 | TGACC | 2 | 10 | 20629 | 20638 | 20 % | 20 % | 20 % | 40 % | 239835357 |
27 | NC_012797 | CAAGC | 2 | 10 | 21009 | 21018 | 40 % | 0 % | 20 % | 40 % | 239835357 |
28 | NC_012797 | CGGCA | 2 | 10 | 21442 | 21451 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
29 | NC_012797 | CACGC | 2 | 10 | 21555 | 21564 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
30 | NC_012797 | TGGTT | 2 | 10 | 22010 | 22019 | 0 % | 60 % | 40 % | 0 % | 239835358 |
31 | NC_012797 | GCCTC | 2 | 10 | 23946 | 23955 | 0 % | 20 % | 20 % | 60 % | 239835360 |
32 | NC_012797 | AAAGC | 2 | 10 | 31666 | 31675 | 60 % | 0 % | 20 % | 20 % | 239835368 |
33 | NC_012797 | CGGAC | 2 | 10 | 33689 | 33698 | 20 % | 0 % | 40 % | 40 % | 239835370 |
34 | NC_012797 | GGCCC | 2 | 10 | 36852 | 36861 | 0 % | 0 % | 40 % | 60 % | 239835372 |
35 | NC_012797 | CCCAG | 2 | 10 | 40332 | 40341 | 20 % | 0 % | 20 % | 60 % | 239835376 |
36 | NC_012797 | CGGCG | 2 | 10 | 41416 | 41425 | 0 % | 0 % | 60 % | 40 % | 239835378 |
37 | NC_012797 | TTTTA | 2 | 10 | 42262 | 42271 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
38 | NC_012797 | ACCGA | 2 | 10 | 43509 | 43518 | 40 % | 0 % | 20 % | 40 % | 239835383 |
39 | NC_012797 | CCTGT | 2 | 10 | 45531 | 45540 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
40 | NC_012797 | CATGG | 2 | 10 | 46230 | 46239 | 20 % | 20 % | 40 % | 20 % | 239835388 |
41 | NC_012797 | AGGTA | 2 | 10 | 47095 | 47104 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
42 | NC_012797 | GCGTG | 2 | 10 | 47598 | 47607 | 0 % | 20 % | 60 % | 20 % | 239835390 |
43 | NC_012797 | GCCGC | 2 | 10 | 47918 | 47927 | 0 % | 0 % | 40 % | 60 % | 239835391 |
44 | NC_012797 | GCAGT | 2 | 10 | 48069 | 48078 | 20 % | 20 % | 40 % | 20 % | 239835391 |
45 | NC_012797 | TGCTC | 2 | 10 | 48920 | 48929 | 0 % | 40 % | 20 % | 40 % | 239835391 |
46 | NC_012797 | GCGAC | 2 | 10 | 50104 | 50113 | 20 % | 0 % | 40 % | 40 % | 239835391 |
47 | NC_012797 | TGGCC | 2 | 10 | 52152 | 52161 | 0 % | 20 % | 40 % | 40 % | 239835393 |
48 | NC_012797 | GCGCA | 2 | 10 | 52181 | 52190 | 20 % | 0 % | 40 % | 40 % | 239835393 |
49 | NC_012797 | GGCCG | 2 | 10 | 53312 | 53321 | 0 % | 0 % | 60 % | 40 % | 239835394 |
50 | NC_012797 | GGGCC | 2 | 10 | 53936 | 53945 | 0 % | 0 % | 60 % | 40 % | 239835395 |
51 | NC_012797 | CCGAG | 2 | 10 | 54536 | 54545 | 20 % | 0 % | 40 % | 40 % | 239835395 |
52 | NC_012797 | GACCT | 2 | 10 | 55589 | 55598 | 20 % | 20 % | 20 % | 40 % | 239835396 |
53 | NC_012797 | CTGCA | 2 | 10 | 57044 | 57053 | 20 % | 20 % | 20 % | 40 % | 239835398 |
54 | NC_012797 | CCCGG | 2 | 10 | 57524 | 57533 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
55 | NC_012797 | ACGGC | 2 | 10 | 58294 | 58303 | 20 % | 0 % | 40 % | 40 % | 239835399 |