MICAS: Microsatellite Analysis Server 3.0

Tetra-nucleotide Non-Coding Repeats of Brachyspira hyodysenteriae WA1 plasmid pBHWA1

Total Repeats: 22

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_012226	TAAA	2	8	97	104	75 %	25 %	0 %	0 %	Non-Coding
2	NC_012226	ATTA	2	8	215	222	50 %	50 %	0 %	0 %	Non-Coding
3	NC_012226	ATTT	2	8	371	378	25 %	75 %	0 %	0 %	Non-Coding
4	NC_012226	ATCA	2	8	434	441	50 %	25 %	0 %	25 %	Non-Coding
5	NC_012226	AATT	2	8	503	510	50 %	50 %	0 %	0 %	Non-Coding
6	NC_012226	ATTT	2	8	742	749	25 %	75 %	0 %	0 %	Non-Coding
7	NC_012226	ATTG	2	8	829	836	25 %	50 %	25 %	0 %	Non-Coding
8	NC_012226	TTCT	2	8	5053	5060	0 %	75 %	0 %	25 %	Non-Coding
9	NC_012226	TTTA	2	8	10600	10607	25 %	75 %	0 %	0 %	Non-Coding
10	NC_012226	TAAA	2	8	10665	10672	75 %	25 %	0 %	0 %	Non-Coding
11	NC_012226	AATT	2	8	10711	10718	50 %	50 %	0 %	0 %	Non-Coding
12	NC_012226	AATA	2	8	12733	12740	75 %	25 %	0 %	0 %	Non-Coding
13	NC_012226	CCCT	2	8	12820	12827	0 %	25 %	0 %	75 %	Non-Coding
14	NC_012226	ATTT	2	8	20956	20963	25 %	75 %	0 %	0 %	Non-Coding
15	NC_012226	TAAA	2	8	21018	21025	75 %	25 %	0 %	0 %	Non-Coding
16	NC_012226	TTTA	2	8	21064	21071	25 %	75 %	0 %	0 %	Non-Coding
17	NC_012226	AAAC	2	8	22046	22053	75 %	0 %	0 %	25 %	Non-Coding
18	NC_012226	AAGC	2	8	24203	24210	50 %	0 %	25 %	25 %	Non-Coding
19	NC_012226	TATT	2	8	24338	24345	25 %	75 %	0 %	0 %	Non-Coding
20	NC_012226	TATT	2	8	24467	24474	25 %	75 %	0 %	0 %	Non-Coding
21	NC_012226	ATTT	3	12	26831	26842	25 %	75 %	0 %	0 %	Non-Coding
22	NC_012226	ATTT	2	8	28755	28762	25 %	75 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.