Penta-nucleotide Coding Repeats of Agrobacterium vitis S4 plasmid pAtS4b
Total Repeats: 98
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011991 | TCAGG | 2 | 10 | 2774 | 2783 | 20 % | 20 % | 40 % | 20 % | 222109120 |
2 | NC_011991 | ATCCG | 2 | 10 | 4247 | 4256 | 20 % | 20 % | 20 % | 40 % | 222109121 |
3 | NC_011991 | CAACG | 2 | 10 | 4262 | 4271 | 40 % | 0 % | 20 % | 40 % | 222109121 |
4 | NC_011991 | GAAAT | 2 | 10 | 4631 | 4640 | 60 % | 20 % | 20 % | 0 % | 222109121 |
5 | NC_011991 | GGCAG | 2 | 10 | 7597 | 7606 | 20 % | 0 % | 60 % | 20 % | 222109126 |
6 | NC_011991 | AGGGG | 2 | 10 | 8110 | 8119 | 20 % | 0 % | 80 % | 0 % | 222109126 |
7 | NC_011991 | TCGCT | 2 | 10 | 9386 | 9395 | 0 % | 40 % | 20 % | 40 % | 222109128 |
8 | NC_011991 | AGGGG | 2 | 10 | 9577 | 9586 | 20 % | 0 % | 80 % | 0 % | 222109128 |
9 | NC_011991 | GTCGC | 2 | 10 | 9934 | 9943 | 0 % | 20 % | 40 % | 40 % | 222109128 |
10 | NC_011991 | GCCAG | 2 | 10 | 10198 | 10207 | 20 % | 0 % | 40 % | 40 % | 222109128 |
11 | NC_011991 | TCAGG | 2 | 10 | 11420 | 11429 | 20 % | 20 % | 40 % | 20 % | 222109130 |
12 | NC_011991 | CGGTC | 2 | 10 | 14172 | 14181 | 0 % | 20 % | 40 % | 40 % | 222109131 |
13 | NC_011991 | CAATT | 2 | 10 | 15299 | 15308 | 40 % | 40 % | 0 % | 20 % | 222109131 |
14 | NC_011991 | CAGCT | 2 | 10 | 16495 | 16504 | 20 % | 20 % | 20 % | 40 % | 222109132 |
15 | NC_011991 | AACAG | 2 | 10 | 19110 | 19119 | 60 % | 0 % | 20 % | 20 % | 222109135 |
16 | NC_011991 | GTTGC | 2 | 10 | 19872 | 19881 | 0 % | 40 % | 40 % | 20 % | 222109136 |
17 | NC_011991 | GCTGT | 2 | 10 | 22905 | 22914 | 0 % | 40 % | 40 % | 20 % | 222109138 |
18 | NC_011991 | TCATC | 2 | 10 | 23538 | 23547 | 20 % | 40 % | 0 % | 40 % | 222109138 |
19 | NC_011991 | TCGCG | 2 | 10 | 30799 | 30808 | 0 % | 20 % | 40 % | 40 % | 222109143 |
20 | NC_011991 | CAGAT | 2 | 10 | 32606 | 32615 | 40 % | 20 % | 20 % | 20 % | 222109143 |
21 | NC_011991 | TGCGG | 2 | 10 | 37002 | 37011 | 0 % | 20 % | 60 % | 20 % | 222109148 |
22 | NC_011991 | GGACT | 2 | 10 | 39532 | 39541 | 20 % | 20 % | 40 % | 20 % | 222109151 |
23 | NC_011991 | CGGCT | 2 | 10 | 39622 | 39631 | 0 % | 20 % | 40 % | 40 % | 222109151 |
24 | NC_011991 | GGGCC | 2 | 10 | 40539 | 40548 | 0 % | 0 % | 60 % | 40 % | 222109151 |
25 | NC_011991 | TCGCA | 2 | 10 | 40674 | 40683 | 20 % | 20 % | 20 % | 40 % | 222109151 |
26 | NC_011991 | TGCCG | 2 | 10 | 42012 | 42021 | 0 % | 20 % | 40 % | 40 % | 222109151 |
27 | NC_011991 | TGCGG | 2 | 10 | 43581 | 43590 | 0 % | 20 % | 60 % | 20 % | 222109151 |
28 | NC_011991 | GAACC | 2 | 10 | 46668 | 46677 | 40 % | 0 % | 20 % | 40 % | 222109156 |
29 | NC_011991 | GAGAA | 2 | 10 | 46957 | 46966 | 60 % | 0 % | 40 % | 0 % | 222109157 |
30 | NC_011991 | GGACA | 2 | 10 | 47257 | 47266 | 40 % | 0 % | 40 % | 20 % | 222109158 |
31 | NC_011991 | GCGGG | 2 | 10 | 48869 | 48878 | 0 % | 0 % | 80 % | 20 % | 222109158 |
32 | NC_011991 | GAGGG | 2 | 10 | 49553 | 49562 | 20 % | 0 % | 80 % | 0 % | 222109159 |
33 | NC_011991 | TTGTG | 2 | 10 | 49650 | 49659 | 0 % | 60 % | 40 % | 0 % | 222109160 |
34 | NC_011991 | CGCTT | 2 | 10 | 50936 | 50945 | 0 % | 40 % | 20 % | 40 % | 222109162 |
35 | NC_011991 | CGGTC | 2 | 10 | 51432 | 51441 | 0 % | 20 % | 40 % | 40 % | 222109163 |
36 | NC_011991 | CCAAG | 2 | 10 | 55418 | 55427 | 40 % | 0 % | 20 % | 40 % | 222109167 |
37 | NC_011991 | TGGCT | 2 | 10 | 55493 | 55502 | 0 % | 40 % | 40 % | 20 % | 222109167 |
38 | NC_011991 | CGGAG | 2 | 10 | 59089 | 59098 | 20 % | 0 % | 60 % | 20 % | 222109171 |
39 | NC_011991 | GAGAT | 2 | 10 | 61233 | 61242 | 40 % | 20 % | 40 % | 0 % | 222109174 |
40 | NC_011991 | TCGCT | 2 | 10 | 62344 | 62353 | 0 % | 40 % | 20 % | 40 % | 222109176 |
41 | NC_011991 | CGCAG | 2 | 10 | 62829 | 62838 | 20 % | 0 % | 40 % | 40 % | 222109177 |
42 | NC_011991 | GTCGC | 2 | 10 | 63089 | 63098 | 0 % | 20 % | 40 % | 40 % | 222109177 |
43 | NC_011991 | GAGGG | 2 | 10 | 65473 | 65482 | 20 % | 0 % | 80 % | 0 % | 222109180 |
44 | NC_011991 | GTCGC | 2 | 10 | 66805 | 66814 | 0 % | 20 % | 40 % | 40 % | 222109180 |
45 | NC_011991 | CCCGG | 2 | 10 | 67128 | 67137 | 0 % | 0 % | 40 % | 60 % | 222109180 |
46 | NC_011991 | TTCCG | 2 | 10 | 67827 | 67836 | 0 % | 40 % | 20 % | 40 % | 222109180 |
47 | NC_011991 | GCAGG | 2 | 10 | 69267 | 69276 | 20 % | 0 % | 60 % | 20 % | 222109180 |
48 | NC_011991 | CGGCG | 2 | 10 | 70026 | 70035 | 0 % | 0 % | 60 % | 40 % | 222109182 |
49 | NC_011991 | GGGCT | 2 | 10 | 70347 | 70356 | 0 % | 20 % | 60 % | 20 % | 222109182 |
50 | NC_011991 | CCACA | 2 | 10 | 70686 | 70695 | 40 % | 0 % | 0 % | 60 % | 222109182 |
51 | NC_011991 | GTGAT | 2 | 10 | 71561 | 71570 | 20 % | 40 % | 40 % | 0 % | 222109183 |
52 | NC_011991 | GCACT | 2 | 10 | 71870 | 71879 | 20 % | 20 % | 20 % | 40 % | 222109183 |
53 | NC_011991 | ATGGT | 2 | 10 | 71910 | 71919 | 20 % | 40 % | 40 % | 0 % | 222109183 |
54 | NC_011991 | CCGAA | 2 | 10 | 72176 | 72185 | 40 % | 0 % | 20 % | 40 % | 222109183 |
55 | NC_011991 | TTCGT | 2 | 10 | 74552 | 74561 | 0 % | 60 % | 20 % | 20 % | 222109187 |
56 | NC_011991 | TTCGC | 2 | 10 | 75362 | 75371 | 0 % | 40 % | 20 % | 40 % | 222109188 |
57 | NC_011991 | AGCCG | 2 | 10 | 76584 | 76593 | 20 % | 0 % | 40 % | 40 % | 222109189 |
58 | NC_011991 | CTGTT | 2 | 10 | 76901 | 76910 | 0 % | 60 % | 20 % | 20 % | 222109189 |
59 | NC_011991 | ACCTC | 2 | 10 | 78245 | 78254 | 20 % | 20 % | 0 % | 60 % | 222109190 |
60 | NC_011991 | CCAAT | 2 | 10 | 78609 | 78618 | 40 % | 20 % | 0 % | 40 % | 222109190 |
61 | NC_011991 | GGGCC | 2 | 10 | 80160 | 80169 | 0 % | 0 % | 60 % | 40 % | 222109191 |
62 | NC_011991 | ATTGG | 2 | 10 | 84732 | 84741 | 20 % | 40 % | 40 % | 0 % | 222109197 |
63 | NC_011991 | GCCGC | 2 | 10 | 84842 | 84851 | 0 % | 0 % | 40 % | 60 % | 222109198 |
64 | NC_011991 | ATCCG | 2 | 10 | 86021 | 86030 | 20 % | 20 % | 20 % | 40 % | 222109200 |
65 | NC_011991 | CTTGG | 2 | 10 | 88406 | 88415 | 0 % | 40 % | 40 % | 20 % | 222109201 |
66 | NC_011991 | AAGCC | 2 | 10 | 92892 | 92901 | 40 % | 0 % | 20 % | 40 % | 222109204 |
67 | NC_011991 | ATGCC | 2 | 10 | 93427 | 93436 | 20 % | 20 % | 20 % | 40 % | 222109205 |
68 | NC_011991 | CGTAT | 2 | 10 | 97493 | 97502 | 20 % | 40 % | 20 % | 20 % | 222109208 |
69 | NC_011991 | GCTCT | 2 | 10 | 98141 | 98150 | 0 % | 40 % | 20 % | 40 % | 222109208 |
70 | NC_011991 | CTGAA | 2 | 10 | 98645 | 98654 | 40 % | 20 % | 20 % | 20 % | 222109208 |
71 | NC_011991 | TCTCG | 2 | 10 | 98970 | 98979 | 0 % | 40 % | 20 % | 40 % | 222109208 |
72 | NC_011991 | GAATG | 2 | 10 | 101755 | 101764 | 40 % | 20 % | 40 % | 0 % | 222109208 |
73 | NC_011991 | AAGCA | 2 | 10 | 102566 | 102575 | 60 % | 0 % | 20 % | 20 % | 222109208 |
74 | NC_011991 | GGTTC | 2 | 10 | 102745 | 102754 | 0 % | 40 % | 40 % | 20 % | 222109208 |
75 | NC_011991 | CGGCC | 2 | 10 | 102880 | 102889 | 0 % | 0 % | 40 % | 60 % | 222109208 |
76 | NC_011991 | GCTCT | 2 | 10 | 103060 | 103069 | 0 % | 40 % | 20 % | 40 % | 222109208 |
77 | NC_011991 | GAATG | 2 | 10 | 104953 | 104962 | 40 % | 20 % | 40 % | 0 % | 222109208 |
78 | NC_011991 | CGGCC | 2 | 10 | 106081 | 106090 | 0 % | 0 % | 40 % | 60 % | 222109208 |
79 | NC_011991 | GTTCA | 2 | 10 | 107188 | 107197 | 20 % | 40 % | 20 % | 20 % | 222109208 |
80 | NC_011991 | CACGA | 2 | 10 | 107870 | 107879 | 40 % | 0 % | 20 % | 40 % | 222109208 |
81 | NC_011991 | GGAGA | 2 | 10 | 109125 | 109134 | 40 % | 0 % | 60 % | 0 % | 222109209 |
82 | NC_011991 | GAATG | 2 | 10 | 109382 | 109391 | 40 % | 20 % | 40 % | 0 % | 222109209 |
83 | NC_011991 | GGTTC | 2 | 10 | 110351 | 110360 | 0 % | 40 % | 40 % | 20 % | 222109209 |
84 | NC_011991 | CGGCC | 2 | 10 | 110486 | 110495 | 0 % | 0 % | 40 % | 60 % | 222109209 |
85 | NC_011991 | GCTCT | 2 | 10 | 110666 | 110675 | 0 % | 40 % | 20 % | 40 % | 222109209 |
86 | NC_011991 | GAATG | 2 | 10 | 112559 | 112568 | 40 % | 20 % | 40 % | 0 % | 222109209 |
87 | NC_011991 | CGATA | 2 | 10 | 113407 | 113416 | 40 % | 20 % | 20 % | 20 % | 222109209 |
88 | NC_011991 | CTTGC | 2 | 10 | 118741 | 118750 | 0 % | 40 % | 20 % | 40 % | 222109213 |
89 | NC_011991 | TGATA | 2 | 10 | 120286 | 120295 | 40 % | 40 % | 20 % | 0 % | 222109215 |
90 | NC_011991 | CAGTC | 2 | 10 | 120874 | 120883 | 20 % | 20 % | 20 % | 40 % | 222109216 |
91 | NC_011991 | CATTC | 2 | 10 | 121324 | 121333 | 20 % | 40 % | 0 % | 40 % | 222109216 |
92 | NC_011991 | AGCCG | 2 | 10 | 121527 | 121536 | 20 % | 0 % | 40 % | 40 % | 222109217 |
93 | NC_011991 | CGAAA | 2 | 10 | 121998 | 122007 | 60 % | 0 % | 20 % | 20 % | 222109217 |
94 | NC_011991 | ATTGC | 2 | 10 | 124336 | 124345 | 20 % | 40 % | 20 % | 20 % | 222109219 |
95 | NC_011991 | AAGAG | 2 | 10 | 128682 | 128691 | 60 % | 0 % | 40 % | 0 % | 222109223 |
96 | NC_011991 | TCGGC | 2 | 10 | 129096 | 129105 | 0 % | 20 % | 40 % | 40 % | 222109223 |
97 | NC_011991 | AACTG | 2 | 10 | 129247 | 129256 | 40 % | 20 % | 20 % | 20 % | 222109224 |
98 | NC_011991 | ATGGA | 2 | 10 | 129324 | 129333 | 40 % | 20 % | 40 % | 0 % | 222109224 |