Hexa-nucleotide Coding Repeats of Agrobacterium vitis S4 chromosome 1
Total Repeats: 1628
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1501 | NC_011989 | GGCAAT | 2 | 12 | 3418863 | 3418874 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222149992 |
1502 | NC_011989 | TCACCG | 2 | 12 | 3425823 | 3425834 | 16.67 % | 16.67 % | 16.67 % | 50 % | 222149999 |
1503 | NC_011989 | GCCGCA | 2 | 12 | 3426753 | 3426764 | 16.67 % | 0 % | 33.33 % | 50 % | 222150000 |
1504 | NC_011989 | CGACAT | 2 | 12 | 3427286 | 3427297 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 222150001 |
1505 | NC_011989 | CGGCAT | 2 | 12 | 3427766 | 3427777 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150001 |
1506 | NC_011989 | CATCCA | 2 | 12 | 3428420 | 3428431 | 33.33 % | 16.67 % | 0 % | 50 % | 222150003 |
1507 | NC_011989 | GATCGA | 2 | 12 | 3429533 | 3429544 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150003 |
1508 | NC_011989 | GCAGCG | 2 | 12 | 3429589 | 3429600 | 16.67 % | 0 % | 50 % | 33.33 % | 222150003 |
1509 | NC_011989 | GGCGTG | 2 | 12 | 3436457 | 3436468 | 0 % | 16.67 % | 66.67 % | 16.67 % | 222150009 |
1510 | NC_011989 | CATTTG | 2 | 12 | 3436559 | 3436570 | 16.67 % | 50 % | 16.67 % | 16.67 % | 222150009 |
1511 | NC_011989 | ATGCCT | 2 | 12 | 3438819 | 3438830 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150011 |
1512 | NC_011989 | CGGGGC | 2 | 12 | 3439696 | 3439707 | 0 % | 0 % | 66.67 % | 33.33 % | 222150011 |
1513 | NC_011989 | GGCTAT | 2 | 12 | 3440354 | 3440365 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 222150011 |
1514 | NC_011989 | TGCTGG | 2 | 12 | 3440764 | 3440775 | 0 % | 33.33 % | 50 % | 16.67 % | 222150012 |
1515 | NC_011989 | CCGCCC | 2 | 12 | 3444544 | 3444555 | 0 % | 0 % | 16.67 % | 83.33 % | 222150012 |
1516 | NC_011989 | GCCAAG | 2 | 12 | 3449216 | 3449227 | 33.33 % | 0 % | 33.33 % | 33.33 % | 222150015 |
1517 | NC_011989 | ATATTG | 2 | 12 | 3452969 | 3452980 | 33.33 % | 50 % | 16.67 % | 0 % | 222150018 |
1518 | NC_011989 | GAAATT | 2 | 12 | 3459737 | 3459748 | 50 % | 33.33 % | 16.67 % | 0 % | 222150024 |
1519 | NC_011989 | TTCCAG | 2 | 12 | 3465773 | 3465784 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150030 |
1520 | NC_011989 | GGACGG | 2 | 12 | 3467314 | 3467325 | 16.67 % | 0 % | 66.67 % | 16.67 % | 222150030 |
1521 | NC_011989 | ATCGGC | 2 | 12 | 3468902 | 3468913 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150031 |
1522 | NC_011989 | CGGTGC | 2 | 12 | 3470494 | 3470505 | 0 % | 16.67 % | 50 % | 33.33 % | 222150032 |
1523 | NC_011989 | GGCGCG | 2 | 12 | 3472697 | 3472708 | 0 % | 0 % | 66.67 % | 33.33 % | 222150034 |
1524 | NC_011989 | ACCGGT | 2 | 12 | 3473126 | 3473137 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150034 |
1525 | NC_011989 | TGGTGA | 2 | 12 | 3475426 | 3475437 | 16.67 % | 33.33 % | 50 % | 0 % | 222150037 |
1526 | NC_011989 | CCGGGG | 2 | 12 | 3475918 | 3475929 | 0 % | 0 % | 66.67 % | 33.33 % | 222150037 |
1527 | NC_011989 | TGCGGC | 2 | 12 | 3479150 | 3479161 | 0 % | 16.67 % | 50 % | 33.33 % | 222150038 |
1528 | NC_011989 | GACTTG | 2 | 12 | 3480175 | 3480186 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 222150039 |
1529 | NC_011989 | CTTGAC | 2 | 12 | 3480198 | 3480209 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150039 |
1530 | NC_011989 | CTTCCT | 2 | 12 | 3480550 | 3480561 | 0 % | 50 % | 0 % | 50 % | 222150040 |
1531 | NC_011989 | CTTGCC | 2 | 12 | 3481950 | 3481961 | 0 % | 33.33 % | 16.67 % | 50 % | 222150041 |
1532 | NC_011989 | CGCTGA | 2 | 12 | 3484516 | 3484527 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150043 |
1533 | NC_011989 | GGCTGA | 2 | 12 | 3484641 | 3484652 | 16.67 % | 16.67 % | 50 % | 16.67 % | 222150044 |
1534 | NC_011989 | GCCCTG | 2 | 12 | 3489337 | 3489348 | 0 % | 16.67 % | 33.33 % | 50 % | 222150049 |
1535 | NC_011989 | GCCTGC | 2 | 12 | 3491783 | 3491794 | 0 % | 16.67 % | 33.33 % | 50 % | 222150053 |
1536 | NC_011989 | ATCGGC | 2 | 12 | 3491818 | 3491829 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150053 |
1537 | NC_011989 | GGCCCA | 2 | 12 | 3493275 | 3493286 | 16.67 % | 0 % | 33.33 % | 50 % | 222150055 |
1538 | NC_011989 | GCGCCC | 2 | 12 | 3496680 | 3496691 | 0 % | 0 % | 33.33 % | 66.67 % | 222150058 |
1539 | NC_011989 | CAGCGC | 2 | 12 | 3499725 | 3499736 | 16.67 % | 0 % | 33.33 % | 50 % | 222150061 |
1540 | NC_011989 | ATCGCA | 2 | 12 | 3501713 | 3501724 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 222150064 |
1541 | NC_011989 | CATCGA | 2 | 12 | 3504702 | 3504713 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 222150067 |
1542 | NC_011989 | GGCATC | 2 | 12 | 3506497 | 3506508 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150068 |
1543 | NC_011989 | GCTGGC | 2 | 12 | 3509491 | 3509502 | 0 % | 16.67 % | 50 % | 33.33 % | 222150069 |
1544 | NC_011989 | TTCCGA | 2 | 12 | 3514403 | 3514414 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150075 |
1545 | NC_011989 | GCCCAT | 2 | 12 | 3514949 | 3514960 | 16.67 % | 16.67 % | 16.67 % | 50 % | 222150075 |
1546 | NC_011989 | TCCACC | 2 | 12 | 3515202 | 3515213 | 16.67 % | 16.67 % | 0 % | 66.67 % | 222150075 |
1547 | NC_011989 | GGTCCG | 2 | 12 | 3519683 | 3519694 | 0 % | 16.67 % | 50 % | 33.33 % | 222150081 |
1548 | NC_011989 | CTTGGC | 2 | 12 | 3521222 | 3521233 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222150082 |
1549 | NC_011989 | CGCTGG | 2 | 12 | 3522213 | 3522224 | 0 % | 16.67 % | 50 % | 33.33 % | 222150082 |
1550 | NC_011989 | CTGTCG | 2 | 12 | 3522856 | 3522867 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222150083 |
1551 | NC_011989 | CCTGTT | 2 | 12 | 3523221 | 3523232 | 0 % | 50 % | 16.67 % | 33.33 % | 222150083 |
1552 | NC_011989 | CTATGC | 2 | 12 | 3523590 | 3523601 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150084 |
1553 | NC_011989 | CGGATA | 2 | 12 | 3526403 | 3526414 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150087 |
1554 | NC_011989 | ACGCCA | 2 | 12 | 3526484 | 3526495 | 33.33 % | 0 % | 16.67 % | 50 % | 222150087 |
1555 | NC_011989 | TGCCCA | 2 | 12 | 3526632 | 3526643 | 16.67 % | 16.67 % | 16.67 % | 50 % | 222150087 |
1556 | NC_011989 | CCGCTT | 2 | 12 | 3527877 | 3527888 | 0 % | 33.33 % | 16.67 % | 50 % | 222150087 |
1557 | NC_011989 | CCTTCA | 2 | 12 | 3530564 | 3530575 | 16.67 % | 33.33 % | 0 % | 50 % | 222150090 |
1558 | NC_011989 | ACAGGA | 2 | 12 | 3532531 | 3532542 | 50 % | 0 % | 33.33 % | 16.67 % | 222150094 |
1559 | NC_011989 | CGCCAA | 2 | 12 | 3533171 | 3533182 | 33.33 % | 0 % | 16.67 % | 50 % | 222150095 |
1560 | NC_011989 | GGCTCA | 2 | 12 | 3534037 | 3534048 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150095 |
1561 | NC_011989 | CAGATG | 2 | 12 | 3534997 | 3535008 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150096 |
1562 | NC_011989 | TCGGCC | 2 | 12 | 3535679 | 3535690 | 0 % | 16.67 % | 33.33 % | 50 % | 222150096 |
1563 | NC_011989 | CCCATT | 2 | 12 | 3535826 | 3535837 | 16.67 % | 33.33 % | 0 % | 50 % | 222150097 |
1564 | NC_011989 | TCGGCG | 2 | 12 | 3539497 | 3539508 | 0 % | 16.67 % | 50 % | 33.33 % | 222150100 |
1565 | NC_011989 | ATGCCC | 2 | 12 | 3542721 | 3542732 | 16.67 % | 16.67 % | 16.67 % | 50 % | 222150105 |
1566 | NC_011989 | TCAGCG | 2 | 12 | 3546053 | 3546064 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150108 |
1567 | NC_011989 | GCCCTG | 2 | 12 | 3546395 | 3546406 | 0 % | 16.67 % | 33.33 % | 50 % | 222150109 |
1568 | NC_011989 | GGTCCT | 2 | 12 | 3548803 | 3548814 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222150112 |
1569 | NC_011989 | GCCGCT | 2 | 12 | 3553929 | 3553940 | 0 % | 16.67 % | 33.33 % | 50 % | 222150114 |
1570 | NC_011989 | GGCCAG | 2 | 12 | 3556553 | 3556564 | 16.67 % | 0 % | 50 % | 33.33 % | 222150118 |
1571 | NC_011989 | CTCATC | 2 | 12 | 3557869 | 3557880 | 16.67 % | 33.33 % | 0 % | 50 % | 222150119 |
1572 | NC_011989 | GGCCTG | 2 | 12 | 3559621 | 3559632 | 0 % | 16.67 % | 50 % | 33.33 % | 222150121 |
1573 | NC_011989 | GGTCTC | 2 | 12 | 3560560 | 3560571 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222150122 |
1574 | NC_011989 | GTCTTC | 2 | 12 | 3561496 | 3561507 | 0 % | 50 % | 16.67 % | 33.33 % | 222150122 |
1575 | NC_011989 | GCTGGC | 2 | 12 | 3566581 | 3566592 | 0 % | 16.67 % | 50 % | 33.33 % | 222150126 |
1576 | NC_011989 | GCCTCG | 2 | 12 | 3566694 | 3566705 | 0 % | 16.67 % | 33.33 % | 50 % | 222150126 |
1577 | NC_011989 | ATCGAG | 2 | 12 | 3571123 | 3571134 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150131 |
1578 | NC_011989 | AGGCCG | 2 | 12 | 3577494 | 3577505 | 16.67 % | 0 % | 50 % | 33.33 % | 222150138 |
1579 | NC_011989 | CTGGAA | 2 | 12 | 3580237 | 3580248 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150140 |
1580 | NC_011989 | CCGGCA | 2 | 12 | 3581549 | 3581560 | 16.67 % | 0 % | 33.33 % | 50 % | 222150142 |
1581 | NC_011989 | CAGCGC | 2 | 12 | 3582471 | 3582482 | 16.67 % | 0 % | 33.33 % | 50 % | 222150142 |
1582 | NC_011989 | GGGGCC | 2 | 12 | 3584890 | 3584901 | 0 % | 0 % | 66.67 % | 33.33 % | 222150144 |
1583 | NC_011989 | CAAGCA | 2 | 12 | 3585547 | 3585558 | 50 % | 0 % | 16.67 % | 33.33 % | 222150144 |
1584 | NC_011989 | CGCTGG | 2 | 12 | 3585911 | 3585922 | 0 % | 16.67 % | 50 % | 33.33 % | 222150145 |
1585 | NC_011989 | GCCTTG | 2 | 12 | 3587120 | 3587131 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222150145 |
1586 | NC_011989 | CCGGAT | 2 | 12 | 3587606 | 3587617 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222150146 |
1587 | NC_011989 | ATCTCG | 2 | 12 | 3587698 | 3587709 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150146 |
1588 | NC_011989 | ATGGGC | 2 | 12 | 3590916 | 3590927 | 16.67 % | 16.67 % | 50 % | 16.67 % | 222150148 |
1589 | NC_011989 | CCCGCG | 2 | 12 | 3592160 | 3592171 | 0 % | 0 % | 33.33 % | 66.67 % | 222150149 |
1590 | NC_011989 | GCCTTG | 2 | 12 | 3597896 | 3597907 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222150155 |
1591 | NC_011989 | CAGACC | 2 | 12 | 3615534 | 3615545 | 33.33 % | 0 % | 16.67 % | 50 % | 222150172 |
1592 | NC_011989 | CGGCCT | 2 | 12 | 3617321 | 3617332 | 0 % | 16.67 % | 33.33 % | 50 % | 222150173 |
1593 | NC_011989 | CCTATC | 2 | 12 | 3620913 | 3620924 | 16.67 % | 33.33 % | 0 % | 50 % | 222150178 |
1594 | NC_011989 | ACGATG | 2 | 12 | 3623024 | 3623035 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150180 |
1595 | NC_011989 | GGCCAC | 2 | 12 | 3637533 | 3637544 | 16.67 % | 0 % | 33.33 % | 50 % | 222150192 |
1596 | NC_011989 | TATCGG | 2 | 12 | 3642604 | 3642615 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 222150196 |
1597 | NC_011989 | CGCGCC | 2 | 12 | 3645353 | 3645364 | 0 % | 0 % | 33.33 % | 66.67 % | 222150198 |
1598 | NC_011989 | TCGATC | 2 | 12 | 3648836 | 3648847 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150198 |
1599 | NC_011989 | TGCGCC | 2 | 12 | 3649400 | 3649411 | 0 % | 16.67 % | 33.33 % | 50 % | 222150198 |
1600 | NC_011989 | ACCGGC | 2 | 12 | 3650923 | 3650934 | 16.67 % | 0 % | 33.33 % | 50 % | 222150198 |
1601 | NC_011989 | GGTGCC | 2 | 12 | 3651310 | 3651321 | 0 % | 16.67 % | 50 % | 33.33 % | 222150198 |
1602 | NC_011989 | CTATGC | 2 | 12 | 3653491 | 3653502 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150199 |
1603 | NC_011989 | ATACCG | 2 | 12 | 3654123 | 3654134 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 222150200 |
1604 | NC_011989 | GATCAG | 2 | 12 | 3655719 | 3655730 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150201 |
1605 | NC_011989 | CACCAT | 2 | 12 | 3658333 | 3658344 | 33.33 % | 16.67 % | 0 % | 50 % | 222150204 |
1606 | NC_011989 | GGCGTC | 2 | 12 | 3660070 | 3660081 | 0 % | 16.67 % | 50 % | 33.33 % | 222150207 |
1607 | NC_011989 | CATCTG | 2 | 12 | 3660279 | 3660290 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150207 |
1608 | NC_011989 | CGATCT | 2 | 12 | 3661720 | 3661731 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222150208 |
1609 | NC_011989 | GTCAAT | 2 | 12 | 3661805 | 3661816 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 222150208 |
1610 | NC_011989 | GCTTCC | 2 | 12 | 3666251 | 3666262 | 0 % | 33.33 % | 16.67 % | 50 % | 222150211 |
1611 | NC_011989 | GATAAA | 2 | 12 | 3669178 | 3669189 | 66.67 % | 16.67 % | 16.67 % | 0 % | 222150214 |
1612 | NC_011989 | CCGCAC | 2 | 12 | 3672401 | 3672412 | 16.67 % | 0 % | 16.67 % | 66.67 % | 222150217 |
1613 | NC_011989 | AAGCCG | 2 | 12 | 3673086 | 3673097 | 33.33 % | 0 % | 33.33 % | 33.33 % | 222150218 |
1614 | NC_011989 | CTGCGG | 2 | 12 | 3676273 | 3676284 | 0 % | 16.67 % | 50 % | 33.33 % | 222150221 |
1615 | NC_011989 | TTGGCG | 2 | 12 | 3676971 | 3676982 | 0 % | 33.33 % | 50 % | 16.67 % | 222150222 |
1616 | NC_011989 | CGACAA | 2 | 12 | 3682750 | 3682761 | 50 % | 0 % | 16.67 % | 33.33 % | 222150225 |
1617 | NC_011989 | CGTTGT | 2 | 12 | 3694529 | 3694540 | 0 % | 50 % | 33.33 % | 16.67 % | 222150230 |
1618 | NC_011989 | TGGCAA | 2 | 12 | 3695681 | 3695692 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150230 |
1619 | NC_011989 | GCGCCA | 2 | 12 | 3698339 | 3698350 | 16.67 % | 0 % | 33.33 % | 50 % | 222150230 |
1620 | NC_011989 | ATCGAA | 2 | 12 | 3699441 | 3699452 | 50 % | 16.67 % | 16.67 % | 16.67 % | 222150230 |
1621 | NC_011989 | GCGCAA | 2 | 12 | 3703736 | 3703747 | 33.33 % | 0 % | 33.33 % | 33.33 % | 222150233 |
1622 | NC_011989 | AGGAAA | 2 | 12 | 3711599 | 3711610 | 66.67 % | 0 % | 33.33 % | 0 % | 222150237 |
1623 | NC_011989 | TGACGG | 2 | 12 | 3713931 | 3713942 | 16.67 % | 16.67 % | 50 % | 16.67 % | 222150239 |
1624 | NC_011989 | GTCGAA | 2 | 12 | 3714678 | 3714689 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150239 |
1625 | NC_011989 | GCCACC | 2 | 12 | 3717409 | 3717420 | 16.67 % | 0 % | 16.67 % | 66.67 % | 222150242 |
1626 | NC_011989 | GATCGA | 2 | 12 | 3718985 | 3718996 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 222150243 |
1627 | NC_011989 | CAATCA | 2 | 12 | 3721611 | 3721622 | 50 % | 16.67 % | 0 % | 33.33 % | 222150245 |
1628 | NC_011989 | ACAATC | 2 | 12 | 3724624 | 3724635 | 50 % | 16.67 % | 0 % | 33.33 % | 222150248 |