MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Agrobacterium vitis S4 chromosome 2

Total Repeats: 34

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_011988	ATGAAA	2	12	58362	58373	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
2	NC_011988	ATTTGA	2	12	87302	87313	33.33 %	50 %	16.67 %	0 %	Non-Coding
3	NC_011988	ATGTCT	2	12	110338	110349	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
4	NC_011988	GAAAAT	2	12	136284	136295	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
5	NC_011988	GTTCCT	2	12	141136	141147	0 %	50 %	16.67 %	33.33 %	Non-Coding
6	NC_011988	TCATTG	2	12	144846	144857	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
7	NC_011988	GAAGGA	2	12	201496	201507	50 %	0 %	50 %	0 %	Non-Coding
8	NC_011988	AAACTC	2	12	202031	202042	50 %	16.67 %	0 %	33.33 %	Non-Coding
9	NC_011988	AAGCCG	2	12	235233	235244	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_011988	AATCGG	2	12	303144	303155	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
11	NC_011988	GGCCAA	2	12	395301	395312	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_011988	GTTTTT	2	12	396558	396569	0 %	83.33 %	16.67 %	0 %	Non-Coding
13	NC_011988	CTGATT	2	12	450408	450419	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
14	NC_011988	TGGGCC	2	12	470706	470717	0 %	16.67 %	50 %	33.33 %	Non-Coding
15	NC_011988	CATATC	2	12	479613	479624	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_011988	TTCCGC	2	12	536187	536198	0 %	33.33 %	16.67 %	50 %	Non-Coding
17	NC_011988	GCCTTT	2	12	633467	633478	0 %	50 %	16.67 %	33.33 %	Non-Coding
18	NC_011988	TTTTAT	2	12	690702	690713	16.67 %	83.33 %	0 %	0 %	Non-Coding
19	NC_011988	GTCAAT	2	12	747049	747060	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
20	NC_011988	TTGAAA	2	12	747061	747072	50 %	33.33 %	16.67 %	0 %	Non-Coding
21	NC_011988	AGCATG	2	12	846004	846015	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
22	NC_011988	CAACCG	2	12	874299	874310	33.33 %	0 %	16.67 %	50 %	Non-Coding
23	NC_011988	TTCCAA	2	12	876608	876619	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_011988	ATAAAA	2	12	911385	911396	83.33 %	16.67 %	0 %	0 %	Non-Coding
25	NC_011988	ATCCGG	2	12	936027	936038	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
26	NC_011988	CTTGCG	2	12	936819	936830	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_011988	GCCGGT	2	12	1017425	1017436	0 %	16.67 %	50 %	33.33 %	Non-Coding
28	NC_011988	ATCCGG	2	12	1049612	1049623	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
29	NC_011988	CTTGCG	2	12	1050404	1050415	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_011988	GTCCCG	2	12	1082966	1082977	0 %	16.67 %	33.33 %	50 %	Non-Coding
31	NC_011988	ACAAGG	2	12	1110903	1110914	50 %	0 %	33.33 %	16.67 %	Non-Coding
32	NC_011988	TTTCTC	2	12	1170535	1170546	0 %	66.67 %	0 %	33.33 %	Non-Coding
33	NC_011988	GCAAAG	2	12	1178928	1178939	50 %	0 %	33.33 %	16.67 %	Non-Coding
34	NC_011988	GTTTGC	2	12	1265577	1265588	0 %	50 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.