Hexa-nucleotide Coding Repeats of Agrobacterium vitis S4 chromosome 2
Total Repeats: 540
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
501 | NC_011988 | TGCCGA | 2 | 12 | 1171445 | 1171456 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222107072 |
502 | NC_011988 | GTCGGC | 2 | 12 | 1172476 | 1172487 | 0 % | 16.67 % | 50 % | 33.33 % | 222107074 |
503 | NC_011988 | CCGCAA | 2 | 12 | 1174481 | 1174492 | 33.33 % | 0 % | 16.67 % | 50 % | 222107076 |
504 | NC_011988 | CAGGCC | 2 | 12 | 1174847 | 1174858 | 16.67 % | 0 % | 33.33 % | 50 % | 222107077 |
505 | NC_011988 | CGATCT | 2 | 12 | 1190544 | 1190555 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222107094 |
506 | NC_011988 | GACCGT | 2 | 12 | 1196222 | 1196233 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222107102 |
507 | NC_011988 | ATTGCC | 2 | 12 | 1198280 | 1198291 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222107105 |
508 | NC_011988 | GCGCGG | 2 | 12 | 1203124 | 1203135 | 0 % | 0 % | 66.67 % | 33.33 % | 222107109 |
509 | NC_011988 | CCAAAG | 2 | 12 | 1204256 | 1204267 | 50 % | 0 % | 16.67 % | 33.33 % | 222107110 |
510 | NC_011988 | CAGATC | 2 | 12 | 1212108 | 1212119 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 222107119 |
511 | NC_011988 | ACGCCG | 2 | 12 | 1212393 | 1212404 | 16.67 % | 0 % | 33.33 % | 50 % | 222107119 |
512 | NC_011988 | GTCGTG | 2 | 12 | 1222216 | 1222227 | 0 % | 33.33 % | 50 % | 16.67 % | 222107128 |
513 | NC_011988 | AGCTGG | 2 | 12 | 1222715 | 1222726 | 16.67 % | 16.67 % | 50 % | 16.67 % | 222107128 |
514 | NC_011988 | ACCGCA | 2 | 12 | 1226903 | 1226914 | 33.33 % | 0 % | 16.67 % | 50 % | 222107132 |
515 | NC_011988 | ATATCG | 2 | 12 | 1227665 | 1227676 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 222107133 |
516 | NC_011988 | TTCGAT | 2 | 12 | 1239131 | 1239142 | 16.67 % | 50 % | 16.67 % | 16.67 % | 222107143 |
517 | NC_011988 | ATCGCA | 2 | 12 | 1240739 | 1240750 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 222107145 |
518 | NC_011988 | CCGTGG | 2 | 12 | 1240848 | 1240859 | 0 % | 16.67 % | 50 % | 33.33 % | 222107146 |
519 | NC_011988 | ATACCT | 2 | 12 | 1243345 | 1243356 | 33.33 % | 33.33 % | 0 % | 33.33 % | 222107147 |
520 | NC_011988 | GCCCTT | 2 | 12 | 1243729 | 1243740 | 0 % | 33.33 % | 16.67 % | 50 % | 222107148 |
521 | NC_011988 | GCCTGT | 2 | 12 | 1244125 | 1244136 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222107148 |
522 | NC_011988 | GACCCG | 2 | 12 | 1244428 | 1244439 | 16.67 % | 0 % | 33.33 % | 50 % | 222107148 |
523 | NC_011988 | GCGATT | 2 | 12 | 1245206 | 1245217 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 222107149 |
524 | NC_011988 | GGCCTC | 2 | 12 | 1246052 | 1246063 | 0 % | 16.67 % | 33.33 % | 50 % | 222107149 |
525 | NC_011988 | TTGCTG | 2 | 12 | 1246313 | 1246324 | 0 % | 50 % | 33.33 % | 16.67 % | 222107149 |
526 | NC_011988 | TGCCGT | 2 | 12 | 1252873 | 1252884 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222107155 |
527 | NC_011988 | CTCTGG | 2 | 12 | 1253342 | 1253353 | 0 % | 33.33 % | 33.33 % | 33.33 % | 222107156 |
528 | NC_011988 | GCCAAG | 2 | 12 | 1255581 | 1255592 | 33.33 % | 0 % | 33.33 % | 33.33 % | 222107158 |
529 | NC_011988 | GTCGAT | 2 | 12 | 1255824 | 1255835 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 222107158 |
530 | NC_011988 | TTCAGC | 2 | 12 | 1256103 | 1256114 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 222107159 |
531 | NC_011988 | CGAACG | 2 | 12 | 1258302 | 1258313 | 33.33 % | 0 % | 33.33 % | 33.33 % | 222107160 |
532 | NC_011988 | CAAGAT | 2 | 12 | 1260067 | 1260078 | 50 % | 16.67 % | 16.67 % | 16.67 % | 222107161 |
533 | NC_011988 | GTGATG | 2 | 12 | 1261707 | 1261718 | 16.67 % | 33.33 % | 50 % | 0 % | 222107162 |
534 | NC_011988 | CTGGCG | 2 | 12 | 1261956 | 1261967 | 0 % | 16.67 % | 50 % | 33.33 % | 222107163 |
535 | NC_011988 | GGGCTG | 2 | 12 | 1263707 | 1263718 | 0 % | 16.67 % | 66.67 % | 16.67 % | 222107164 |
536 | NC_011988 | ACGGTG | 2 | 12 | 1264405 | 1264416 | 16.67 % | 16.67 % | 50 % | 16.67 % | 222107166 |
537 | NC_011988 | TGGCCA | 2 | 12 | 1266002 | 1266013 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 222107167 |
538 | NC_011988 | TGCGGG | 2 | 12 | 1274584 | 1274595 | 0 % | 16.67 % | 66.67 % | 16.67 % | 222107174 |
539 | NC_011988 | CCCATC | 2 | 12 | 1277608 | 1277619 | 16.67 % | 16.67 % | 0 % | 66.67 % | 222107178 |
540 | NC_011988 | CCCTGT | 2 | 12 | 1280455 | 1280466 | 0 % | 33.33 % | 16.67 % | 50 % | 222107179 |