Penta-nucleotide Non-Coding Repeats of Agrobacterium vitis S4 chromosome 2
Total Repeats: 133
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011988 | TTGCG | 2 | 10 | 10524 | 10533 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
2 | NC_011988 | GAAGA | 2 | 10 | 23154 | 23163 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
3 | NC_011988 | TCCCC | 2 | 10 | 30268 | 30277 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
4 | NC_011988 | GATGC | 2 | 10 | 35358 | 35367 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
5 | NC_011988 | GCTTT | 2 | 10 | 35437 | 35446 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
6 | NC_011988 | CTGCC | 2 | 10 | 35881 | 35890 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
7 | NC_011988 | TTTTG | 2 | 10 | 36171 | 36180 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
8 | NC_011988 | TGCGT | 2 | 10 | 36241 | 36250 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
9 | NC_011988 | AGGGT | 2 | 10 | 37271 | 37280 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
10 | NC_011988 | GGCGC | 2 | 10 | 53056 | 53065 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
11 | NC_011988 | CTATC | 2 | 10 | 57997 | 58006 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
12 | NC_011988 | TGTAA | 2 | 10 | 62281 | 62290 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
13 | NC_011988 | ACTGT | 2 | 10 | 66743 | 66752 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
14 | NC_011988 | CGCTG | 2 | 10 | 72695 | 72704 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
15 | NC_011988 | TTTTG | 2 | 10 | 78333 | 78342 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
16 | NC_011988 | TTGGC | 2 | 10 | 96200 | 96209 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
17 | NC_011988 | CTTTA | 2 | 10 | 96329 | 96338 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
18 | NC_011988 | GTCAT | 2 | 10 | 110301 | 110310 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
19 | NC_011988 | TTCAG | 2 | 10 | 114215 | 114224 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
20 | NC_011988 | TTTGC | 2 | 10 | 126166 | 126175 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
21 | NC_011988 | CGAAG | 2 | 10 | 142124 | 142133 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
22 | NC_011988 | AAACC | 2 | 10 | 190590 | 190599 | 60 % | 0 % | 0 % | 40 % | Non-Coding |
23 | NC_011988 | TTATT | 2 | 10 | 190730 | 190739 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
24 | NC_011988 | ACCGC | 2 | 10 | 198387 | 198396 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
25 | NC_011988 | TGGCC | 2 | 10 | 200950 | 200959 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
26 | NC_011988 | TCCAT | 2 | 10 | 211721 | 211730 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
27 | NC_011988 | GTACA | 2 | 10 | 220147 | 220156 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
28 | NC_011988 | ACAAA | 2 | 10 | 292158 | 292167 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
29 | NC_011988 | TTGGC | 2 | 10 | 299012 | 299021 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
30 | NC_011988 | GCTTT | 2 | 10 | 310203 | 310212 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
31 | NC_011988 | CAGGC | 2 | 10 | 335030 | 335039 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
32 | NC_011988 | ACCGC | 2 | 10 | 335299 | 335308 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
33 | NC_011988 | GCGGT | 2 | 10 | 335317 | 335326 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
34 | NC_011988 | TGAAT | 2 | 10 | 340681 | 340690 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
35 | NC_011988 | GGCAG | 2 | 10 | 349821 | 349830 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
36 | NC_011988 | CAAAC | 2 | 10 | 349873 | 349882 | 60 % | 0 % | 0 % | 40 % | Non-Coding |
37 | NC_011988 | TAAAA | 2 | 10 | 355136 | 355145 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
38 | NC_011988 | GGATG | 2 | 10 | 396903 | 396912 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
39 | NC_011988 | CTGCG | 2 | 10 | 429567 | 429576 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
40 | NC_011988 | CGCTG | 2 | 10 | 429788 | 429797 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
41 | NC_011988 | GCGGG | 2 | 10 | 443270 | 443279 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
42 | NC_011988 | TTGAT | 2 | 10 | 459475 | 459484 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
43 | NC_011988 | CATAT | 2 | 10 | 477382 | 477391 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
44 | NC_011988 | AAGGA | 2 | 10 | 486032 | 486041 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
45 | NC_011988 | TTTGG | 2 | 10 | 496665 | 496674 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
46 | NC_011988 | GCGCC | 2 | 10 | 498462 | 498471 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
47 | NC_011988 | TTGTT | 2 | 10 | 511087 | 511096 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
48 | NC_011988 | AGGAA | 2 | 10 | 511156 | 511165 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
49 | NC_011988 | TCCAT | 2 | 10 | 538400 | 538409 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
50 | NC_011988 | GCTGG | 2 | 10 | 538471 | 538480 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
51 | NC_011988 | TCGTT | 2 | 10 | 540422 | 540431 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
52 | NC_011988 | GAAAC | 2 | 10 | 552463 | 552472 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
53 | NC_011988 | GACTG | 2 | 10 | 579482 | 579491 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
54 | NC_011988 | TATTT | 2 | 10 | 585143 | 585152 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
55 | NC_011988 | TGCTA | 2 | 10 | 590855 | 590864 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
56 | NC_011988 | TGCTA | 2 | 10 | 597511 | 597520 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
57 | NC_011988 | TGAAG | 2 | 10 | 598420 | 598429 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
58 | NC_011988 | TGCAG | 2 | 10 | 598636 | 598645 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
59 | NC_011988 | GGTTC | 2 | 10 | 598967 | 598976 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
60 | NC_011988 | TTCCT | 2 | 10 | 607056 | 607065 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
61 | NC_011988 | AAAAC | 2 | 10 | 618785 | 618794 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
62 | NC_011988 | TCGAG | 2 | 10 | 633457 | 633466 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
63 | NC_011988 | TTTTC | 2 | 10 | 695841 | 695850 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
64 | NC_011988 | CAAGC | 2 | 10 | 698977 | 698986 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
65 | NC_011988 | CTTTC | 2 | 10 | 714598 | 714607 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
66 | NC_011988 | TCGCT | 2 | 10 | 726649 | 726658 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
67 | NC_011988 | CAGAT | 2 | 10 | 739033 | 739042 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
68 | NC_011988 | CGGTT | 2 | 10 | 739200 | 739209 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
69 | NC_011988 | AATTT | 2 | 10 | 752792 | 752801 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
70 | NC_011988 | CCTTT | 2 | 10 | 780458 | 780467 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
71 | NC_011988 | GGGCG | 2 | 10 | 797722 | 797731 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
72 | NC_011988 | GGGGT | 2 | 10 | 805318 | 805327 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
73 | NC_011988 | GCTTG | 2 | 10 | 809147 | 809156 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
74 | NC_011988 | TTAAA | 2 | 10 | 822355 | 822364 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
75 | NC_011988 | TTGAT | 2 | 10 | 822875 | 822884 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
76 | NC_011988 | CTGAA | 2 | 10 | 823908 | 823917 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
77 | NC_011988 | TTGAA | 2 | 10 | 835541 | 835550 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
78 | NC_011988 | TGAAA | 2 | 10 | 836390 | 836399 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
79 | NC_011988 | AAAAG | 2 | 10 | 837938 | 837947 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
80 | NC_011988 | CATGC | 2 | 10 | 885007 | 885016 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
81 | NC_011988 | ATTGC | 2 | 10 | 913430 | 913439 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
82 | NC_011988 | ACATT | 2 | 10 | 915676 | 915685 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
83 | NC_011988 | GCTTC | 2 | 10 | 922782 | 922791 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
84 | NC_011988 | TGTGT | 2 | 10 | 922926 | 922935 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
85 | NC_011988 | TCGTG | 2 | 10 | 932013 | 932022 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
86 | NC_011988 | GGGCT | 2 | 10 | 932158 | 932167 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
87 | NC_011988 | GAAGA | 2 | 10 | 933296 | 933305 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
88 | NC_011988 | AAGGA | 2 | 10 | 933707 | 933716 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
89 | NC_011988 | ACAAA | 2 | 10 | 934030 | 934039 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
90 | NC_011988 | AAGGA | 2 | 10 | 934162 | 934171 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
91 | NC_011988 | AGTGG | 2 | 10 | 935403 | 935412 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
92 | NC_011988 | TTGAA | 2 | 10 | 935696 | 935705 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
93 | NC_011988 | GGCGG | 2 | 10 | 936948 | 936957 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
94 | NC_011988 | CGCGG | 2 | 10 | 962596 | 962605 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
95 | NC_011988 | CAAGT | 2 | 10 | 964067 | 964076 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
96 | NC_011988 | GTTCG | 2 | 10 | 987768 | 987777 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
97 | NC_011988 | AACCG | 2 | 10 | 1003785 | 1003794 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
98 | NC_011988 | GGCAA | 2 | 10 | 1004891 | 1004900 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
99 | NC_011988 | CATAT | 2 | 10 | 1005319 | 1005328 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
100 | NC_011988 | GGCTT | 2 | 10 | 1014888 | 1014897 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
101 | NC_011988 | TCGTG | 2 | 10 | 1045602 | 1045611 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
102 | NC_011988 | GGGCT | 2 | 10 | 1045747 | 1045756 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
103 | NC_011988 | GAAGA | 2 | 10 | 1046885 | 1046894 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
104 | NC_011988 | AAGGA | 2 | 10 | 1047296 | 1047305 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
105 | NC_011988 | ACAAA | 2 | 10 | 1047619 | 1047628 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
106 | NC_011988 | AAGGA | 2 | 10 | 1047751 | 1047760 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
107 | NC_011988 | AGTGG | 2 | 10 | 1048988 | 1048997 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
108 | NC_011988 | TTGAA | 2 | 10 | 1049281 | 1049290 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
109 | NC_011988 | GGCGG | 2 | 10 | 1050533 | 1050542 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
110 | NC_011988 | AAGGT | 2 | 10 | 1072955 | 1072964 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
111 | NC_011988 | GTCAT | 2 | 10 | 1077056 | 1077065 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
112 | NC_011988 | GCCAA | 2 | 10 | 1098484 | 1098493 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
113 | NC_011988 | CTTCT | 2 | 10 | 1124805 | 1124814 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
114 | NC_011988 | CTGTT | 2 | 10 | 1137375 | 1137384 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
115 | NC_011988 | GGACC | 2 | 10 | 1141997 | 1142006 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
116 | NC_011988 | GCTAT | 2 | 10 | 1160670 | 1160679 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
117 | NC_011988 | TCTTT | 2 | 10 | 1162135 | 1162144 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
118 | NC_011988 | ACCGT | 2 | 10 | 1167691 | 1167700 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
119 | NC_011988 | TGGGT | 2 | 10 | 1167782 | 1167791 | 0 % | 40 % | 60 % | 0 % | Non-Coding |
120 | NC_011988 | CCTTG | 2 | 10 | 1169404 | 1169413 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
121 | NC_011988 | ATCGG | 2 | 10 | 1169763 | 1169772 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
122 | NC_011988 | TCTCT | 2 | 10 | 1169905 | 1169914 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
123 | NC_011988 | GGCTG | 2 | 10 | 1174726 | 1174735 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
124 | NC_011988 | TGATC | 2 | 10 | 1178530 | 1178539 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
125 | NC_011988 | GCATT | 2 | 10 | 1180708 | 1180717 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
126 | NC_011988 | TGGCG | 2 | 10 | 1201277 | 1201286 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
127 | NC_011988 | GGAGC | 2 | 10 | 1206356 | 1206365 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
128 | NC_011988 | AGGGG | 2 | 10 | 1209074 | 1209083 | 20 % | 0 % | 80 % | 0 % | Non-Coding |
129 | NC_011988 | AGGAT | 2 | 10 | 1214177 | 1214186 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
130 | NC_011988 | GCTTG | 2 | 10 | 1217476 | 1217485 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
131 | NC_011988 | GAAAA | 2 | 10 | 1226494 | 1226503 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
132 | NC_011988 | AGAGA | 2 | 10 | 1246373 | 1246382 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
133 | NC_011988 | GGCGC | 2 | 10 | 1253650 | 1253659 | 0 % | 0 % | 60 % | 40 % | Non-Coding |