MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Agrobacterium vitis S4 plasmid pTiS4

Total Repeats: 16

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_011982	CTCAAT	2	12	30210	30221	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_011982	CCTCCC	2	12	30266	30277	0 %	16.67 %	0 %	83.33 %	Non-Coding
3	NC_011982	TGGCGG	2	12	32362	32373	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
4	NC_011982	CAATGC	2	12	37826	37837	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
5	NC_011982	AGACGA	2	12	37912	37923	50 %	0 %	33.33 %	16.67 %	Non-Coding
6	NC_011982	TCCTTC	2	12	38370	38381	0 %	50 %	0 %	50 %	Non-Coding
7	NC_011982	GCGAGC	2	12	39475	39486	16.67 %	0 %	50 %	33.33 %	Non-Coding
8	NC_011982	GACCTT	2	12	40290	40301	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
9	NC_011982	CGACAC	2	12	67981	67992	33.33 %	0 %	16.67 %	50 %	Non-Coding
10	NC_011982	TTCGCT	2	12	77451	77462	0 %	50 %	16.67 %	33.33 %	Non-Coding
11	NC_011982	CGATGG	2	12	90863	90874	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
12	NC_011982	GGATGG	2	12	91323	91334	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
13	NC_011982	CTTGGC	2	12	147214	147225	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_011982	GCCAAG	2	12	180053	180064	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_011982	TCGGCT	2	12	191177	191188	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_011982	AAGTGT	2	12	221108	221119	33.33 %	33.33 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.