Tetra-nucleotide Repeats of Agrobacterium vitis S4 plasmid pTiS4
Total Repeats: 665
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
501 | NC_011982 | TAAA | 2 | 8 | 201119 | 201126 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
502 | NC_011982 | GGTT | 2 | 8 | 201157 | 201164 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
503 | NC_011982 | TTTA | 2 | 8 | 201327 | 201334 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
504 | NC_011982 | TTCC | 2 | 8 | 201807 | 201814 | 0 % | 50 % | 0 % | 50 % | 222080274 |
505 | NC_011982 | GATA | 2 | 8 | 202738 | 202745 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
506 | NC_011982 | CGTA | 2 | 8 | 202754 | 202761 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
507 | NC_011982 | CTGG | 2 | 8 | 203313 | 203320 | 0 % | 25 % | 50 % | 25 % | 222080275 |
508 | NC_011982 | ACCA | 2 | 8 | 203353 | 203360 | 50 % | 0 % | 0 % | 50 % | 222080275 |
509 | NC_011982 | AGAC | 2 | 8 | 204111 | 204118 | 50 % | 0 % | 25 % | 25 % | 222080276 |
510 | NC_011982 | CCCG | 2 | 8 | 204919 | 204926 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
511 | NC_011982 | GCCG | 2 | 8 | 205432 | 205439 | 0 % | 0 % | 50 % | 50 % | 222080277 |
512 | NC_011982 | CCGG | 2 | 8 | 206012 | 206019 | 0 % | 0 % | 50 % | 50 % | 222080277 |
513 | NC_011982 | TCCA | 2 | 8 | 206514 | 206521 | 25 % | 25 % | 0 % | 50 % | 222080278 |
514 | NC_011982 | TCCA | 2 | 8 | 206564 | 206571 | 25 % | 25 % | 0 % | 50 % | 222080278 |
515 | NC_011982 | GTCA | 2 | 8 | 206771 | 206778 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
516 | NC_011982 | ATCA | 2 | 8 | 206788 | 206795 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
517 | NC_011982 | GCAA | 2 | 8 | 206825 | 206832 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
518 | NC_011982 | TTGA | 2 | 8 | 207017 | 207024 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
519 | NC_011982 | TTAT | 2 | 8 | 207284 | 207291 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
520 | NC_011982 | CGAG | 2 | 8 | 208286 | 208293 | 25 % | 0 % | 50 % | 25 % | 222080280 |
521 | NC_011982 | GCCA | 2 | 8 | 208873 | 208880 | 25 % | 0 % | 25 % | 50 % | 222080280 |
522 | NC_011982 | GTGC | 2 | 8 | 208909 | 208916 | 0 % | 25 % | 50 % | 25 % | 222080280 |
523 | NC_011982 | TGCT | 2 | 8 | 209549 | 209556 | 0 % | 50 % | 25 % | 25 % | 222080280 |
524 | NC_011982 | CAAG | 2 | 8 | 209860 | 209867 | 50 % | 0 % | 25 % | 25 % | 222080281 |
525 | NC_011982 | TTTC | 2 | 8 | 210795 | 210802 | 0 % | 75 % | 0 % | 25 % | 222080282 |
526 | NC_011982 | GCAA | 2 | 8 | 211103 | 211110 | 50 % | 0 % | 25 % | 25 % | 222080282 |
527 | NC_011982 | CGAC | 2 | 8 | 211446 | 211453 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
528 | NC_011982 | CGGG | 2 | 8 | 211985 | 211992 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
529 | NC_011982 | CATG | 2 | 8 | 212226 | 212233 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
530 | NC_011982 | CGAC | 2 | 8 | 212252 | 212259 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
531 | NC_011982 | CTTC | 2 | 8 | 212271 | 212278 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
532 | NC_011982 | GTCC | 2 | 8 | 212359 | 212366 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
533 | NC_011982 | TTGT | 2 | 8 | 213352 | 213359 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
534 | NC_011982 | ATTA | 2 | 8 | 213406 | 213413 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
535 | NC_011982 | GATG | 2 | 8 | 213462 | 213469 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
536 | NC_011982 | TTAG | 2 | 8 | 213486 | 213493 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
537 | NC_011982 | ATAA | 2 | 8 | 213560 | 213567 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
538 | NC_011982 | CGAA | 2 | 8 | 213802 | 213809 | 50 % | 0 % | 25 % | 25 % | 222080283 |
539 | NC_011982 | TGGT | 2 | 8 | 214204 | 214211 | 0 % | 50 % | 50 % | 0 % | 222080283 |
540 | NC_011982 | TGAA | 2 | 8 | 214692 | 214699 | 50 % | 25 % | 25 % | 0 % | 222080283 |
541 | NC_011982 | CAGT | 2 | 8 | 214879 | 214886 | 25 % | 25 % | 25 % | 25 % | 222080283 |
542 | NC_011982 | TTGC | 2 | 8 | 215474 | 215481 | 0 % | 50 % | 25 % | 25 % | 222080284 |
543 | NC_011982 | GAGG | 2 | 8 | 215913 | 215920 | 25 % | 0 % | 75 % | 0 % | 222080284 |
544 | NC_011982 | GCTT | 2 | 8 | 216159 | 216166 | 0 % | 50 % | 25 % | 25 % | 222080284 |
545 | NC_011982 | CACC | 2 | 8 | 216501 | 216508 | 25 % | 0 % | 0 % | 75 % | 222080284 |
546 | NC_011982 | GCTA | 2 | 8 | 216782 | 216789 | 25 % | 25 % | 25 % | 25 % | 222080284 |
547 | NC_011982 | ATGC | 2 | 8 | 216801 | 216808 | 25 % | 25 % | 25 % | 25 % | 222080284 |
548 | NC_011982 | TGTT | 2 | 8 | 216946 | 216953 | 0 % | 75 % | 25 % | 0 % | 222080284 |
549 | NC_011982 | TTTC | 2 | 8 | 217316 | 217323 | 0 % | 75 % | 0 % | 25 % | 222080284 |
550 | NC_011982 | ATGG | 2 | 8 | 217664 | 217671 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
551 | NC_011982 | TTGC | 2 | 8 | 218068 | 218075 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
552 | NC_011982 | CGAG | 2 | 8 | 218204 | 218211 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
553 | NC_011982 | GCCT | 2 | 8 | 218246 | 218253 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
554 | NC_011982 | GTCG | 2 | 8 | 218411 | 218418 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
555 | NC_011982 | GGCT | 2 | 8 | 218575 | 218582 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
556 | NC_011982 | AAAC | 2 | 8 | 220326 | 220333 | 75 % | 0 % | 0 % | 25 % | 222080286 |
557 | NC_011982 | ATCA | 2 | 8 | 222039 | 222046 | 50 % | 25 % | 0 % | 25 % | 222080287 |
558 | NC_011982 | TCTG | 2 | 8 | 222096 | 222103 | 0 % | 50 % | 25 % | 25 % | 222080287 |
559 | NC_011982 | GATG | 2 | 8 | 222188 | 222195 | 25 % | 25 % | 50 % | 0 % | 222080287 |
560 | NC_011982 | ATGT | 2 | 8 | 222521 | 222528 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
561 | NC_011982 | ATTT | 2 | 8 | 222661 | 222668 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
562 | NC_011982 | GGCC | 2 | 8 | 222957 | 222964 | 0 % | 0 % | 50 % | 50 % | 222080288 |
563 | NC_011982 | GCCG | 2 | 8 | 224597 | 224604 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
564 | NC_011982 | AGTT | 2 | 8 | 224791 | 224798 | 25 % | 50 % | 25 % | 0 % | 222080290 |
565 | NC_011982 | CCAT | 2 | 8 | 225197 | 225204 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
566 | NC_011982 | ATCA | 2 | 8 | 225549 | 225556 | 50 % | 25 % | 0 % | 25 % | 222080291 |
567 | NC_011982 | GTCG | 2 | 8 | 225685 | 225692 | 0 % | 25 % | 50 % | 25 % | 222080291 |
568 | NC_011982 | TCAG | 2 | 8 | 225934 | 225941 | 25 % | 25 % | 25 % | 25 % | 222080291 |
569 | NC_011982 | TCCC | 2 | 8 | 226005 | 226012 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
570 | NC_011982 | AAAT | 2 | 8 | 226033 | 226040 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
571 | NC_011982 | CTTT | 2 | 8 | 226142 | 226149 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
572 | NC_011982 | GGCT | 2 | 8 | 226509 | 226516 | 0 % | 25 % | 50 % | 25 % | 222080292 |
573 | NC_011982 | ACCG | 2 | 8 | 226747 | 226754 | 25 % | 0 % | 25 % | 50 % | 222080292 |
574 | NC_011982 | CCGG | 2 | 8 | 227519 | 227526 | 0 % | 0 % | 50 % | 50 % | 222080292 |
575 | NC_011982 | ATCG | 2 | 8 | 227667 | 227674 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
576 | NC_011982 | CTTC | 2 | 8 | 228171 | 228178 | 0 % | 50 % | 0 % | 50 % | 222080293 |
577 | NC_011982 | TTCG | 2 | 8 | 228202 | 228209 | 0 % | 50 % | 25 % | 25 % | 222080293 |
578 | NC_011982 | GACG | 2 | 8 | 228213 | 228220 | 25 % | 0 % | 50 % | 25 % | 222080293 |
579 | NC_011982 | TGAA | 2 | 8 | 229201 | 229208 | 50 % | 25 % | 25 % | 0 % | 222080294 |
580 | NC_011982 | ATCC | 2 | 8 | 229320 | 229327 | 25 % | 25 % | 0 % | 50 % | 222080294 |
581 | NC_011982 | GTTG | 2 | 8 | 229665 | 229672 | 0 % | 50 % | 50 % | 0 % | 222080294 |
582 | NC_011982 | CGAG | 2 | 8 | 230122 | 230129 | 25 % | 0 % | 50 % | 25 % | 222080295 |
583 | NC_011982 | CATT | 2 | 8 | 230532 | 230539 | 25 % | 50 % | 0 % | 25 % | 222080295 |
584 | NC_011982 | CGGA | 2 | 8 | 230870 | 230877 | 25 % | 0 % | 50 % | 25 % | 222080296 |
585 | NC_011982 | CTTC | 2 | 8 | 232010 | 232017 | 0 % | 50 % | 0 % | 50 % | 222080297 |
586 | NC_011982 | CGGC | 2 | 8 | 232094 | 232101 | 0 % | 0 % | 50 % | 50 % | 222080297 |
587 | NC_011982 | AACG | 2 | 8 | 233531 | 233538 | 50 % | 0 % | 25 % | 25 % | 222080298 |
588 | NC_011982 | CAAT | 2 | 8 | 233700 | 233707 | 50 % | 25 % | 0 % | 25 % | 222080298 |
589 | NC_011982 | GACA | 2 | 8 | 233868 | 233875 | 50 % | 0 % | 25 % | 25 % | 222080298 |
590 | NC_011982 | CATC | 2 | 8 | 234027 | 234034 | 25 % | 25 % | 0 % | 50 % | 222080299 |
591 | NC_011982 | GACT | 2 | 8 | 234610 | 234617 | 25 % | 25 % | 25 % | 25 % | 222080299 |
592 | NC_011982 | CCGA | 2 | 8 | 234874 | 234881 | 25 % | 0 % | 25 % | 50 % | 222080299 |
593 | NC_011982 | GGAC | 2 | 8 | 235209 | 235216 | 25 % | 0 % | 50 % | 25 % | 222080299 |
594 | NC_011982 | AAAG | 2 | 8 | 235247 | 235254 | 75 % | 0 % | 25 % | 0 % | 222080299 |
595 | NC_011982 | AGCA | 2 | 8 | 235320 | 235327 | 50 % | 0 % | 25 % | 25 % | 222080299 |
596 | NC_011982 | CGAA | 2 | 8 | 235746 | 235753 | 50 % | 0 % | 25 % | 25 % | 222080299 |
597 | NC_011982 | AGCA | 2 | 8 | 236340 | 236347 | 50 % | 0 % | 25 % | 25 % | 222080300 |
598 | NC_011982 | GAGC | 2 | 8 | 236348 | 236355 | 25 % | 0 % | 50 % | 25 % | 222080300 |
599 | NC_011982 | ACAG | 2 | 8 | 236801 | 236808 | 50 % | 0 % | 25 % | 25 % | 222080301 |
600 | NC_011982 | AGGA | 2 | 8 | 237125 | 237132 | 50 % | 0 % | 50 % | 0 % | 222080301 |
601 | NC_011982 | AACC | 2 | 8 | 237192 | 237199 | 50 % | 0 % | 0 % | 50 % | 222080301 |
602 | NC_011982 | CGAT | 2 | 8 | 237288 | 237295 | 25 % | 25 % | 25 % | 25 % | 222080301 |
603 | NC_011982 | TGGC | 2 | 8 | 237408 | 237415 | 0 % | 25 % | 50 % | 25 % | 222080301 |
604 | NC_011982 | CGGT | 2 | 8 | 237497 | 237504 | 0 % | 25 % | 50 % | 25 % | 222080301 |
605 | NC_011982 | GGCC | 2 | 8 | 237801 | 237808 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
606 | NC_011982 | ATGC | 2 | 8 | 238293 | 238300 | 25 % | 25 % | 25 % | 25 % | 222080302 |
607 | NC_011982 | AACG | 2 | 8 | 238539 | 238546 | 50 % | 0 % | 25 % | 25 % | 222080302 |
608 | NC_011982 | GGTT | 2 | 8 | 239234 | 239241 | 0 % | 50 % | 50 % | 0 % | 222080302 |
609 | NC_011982 | ATCC | 2 | 8 | 239388 | 239395 | 25 % | 25 % | 0 % | 50 % | 222080302 |
610 | NC_011982 | AGGG | 2 | 8 | 239733 | 239740 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
611 | NC_011982 | CTAT | 2 | 8 | 239836 | 239843 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
612 | NC_011982 | GGCA | 2 | 8 | 240568 | 240575 | 25 % | 0 % | 50 % | 25 % | 222080304 |
613 | NC_011982 | CTGG | 2 | 8 | 240731 | 240738 | 0 % | 25 % | 50 % | 25 % | 222080304 |
614 | NC_011982 | TATC | 2 | 8 | 240751 | 240758 | 25 % | 50 % | 0 % | 25 % | 222080304 |
615 | NC_011982 | CCGA | 2 | 8 | 241006 | 241013 | 25 % | 0 % | 25 % | 50 % | 222080304 |
616 | NC_011982 | GCCG | 2 | 8 | 241928 | 241935 | 0 % | 0 % | 50 % | 50 % | 222080305 |
617 | NC_011982 | TTTC | 2 | 8 | 242127 | 242134 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
618 | NC_011982 | GAGC | 2 | 8 | 242852 | 242859 | 25 % | 0 % | 50 % | 25 % | 222080306 |
619 | NC_011982 | TCGA | 2 | 8 | 243215 | 243222 | 25 % | 25 % | 25 % | 25 % | 222080306 |
620 | NC_011982 | GTGC | 2 | 8 | 243559 | 243566 | 0 % | 25 % | 50 % | 25 % | 222080306 |
621 | NC_011982 | CAGG | 2 | 8 | 245145 | 245152 | 25 % | 0 % | 50 % | 25 % | 222080307 |
622 | NC_011982 | GCAC | 2 | 8 | 245167 | 245174 | 25 % | 0 % | 25 % | 50 % | 222080307 |
623 | NC_011982 | GACA | 2 | 8 | 245181 | 245188 | 50 % | 0 % | 25 % | 25 % | 222080307 |
624 | NC_011982 | CGTG | 2 | 8 | 245211 | 245218 | 0 % | 25 % | 50 % | 25 % | 222080307 |
625 | NC_011982 | AGGA | 2 | 8 | 245340 | 245347 | 50 % | 0 % | 50 % | 0 % | 222080307 |
626 | NC_011982 | GCCT | 2 | 8 | 245470 | 245477 | 0 % | 25 % | 25 % | 50 % | 222080307 |
627 | NC_011982 | CATC | 2 | 8 | 245568 | 245575 | 25 % | 25 % | 0 % | 50 % | 222080307 |
628 | NC_011982 | TGGA | 2 | 8 | 245941 | 245948 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
629 | NC_011982 | GGGT | 2 | 8 | 246187 | 246194 | 0 % | 25 % | 75 % | 0 % | 222080308 |
630 | NC_011982 | CTTC | 2 | 8 | 246356 | 246363 | 0 % | 50 % | 0 % | 50 % | 222080308 |
631 | NC_011982 | CGTT | 2 | 8 | 246509 | 246516 | 0 % | 50 % | 25 % | 25 % | 222080308 |
632 | NC_011982 | GCGA | 2 | 8 | 246676 | 246683 | 25 % | 0 % | 50 % | 25 % | 222080308 |
633 | NC_011982 | TCAG | 2 | 8 | 247270 | 247277 | 25 % | 25 % | 25 % | 25 % | 222080309 |
634 | NC_011982 | GCCG | 2 | 8 | 247355 | 247362 | 0 % | 0 % | 50 % | 50 % | 222080309 |
635 | NC_011982 | GGCG | 2 | 8 | 247422 | 247429 | 0 % | 0 % | 75 % | 25 % | 222080309 |
636 | NC_011982 | CGTC | 2 | 8 | 247664 | 247671 | 0 % | 25 % | 25 % | 50 % | 222080309 |
637 | NC_011982 | AGTG | 2 | 8 | 248742 | 248749 | 25 % | 25 % | 50 % | 0 % | 222080310 |
638 | NC_011982 | TCCC | 2 | 8 | 249361 | 249368 | 0 % | 25 % | 0 % | 75 % | 222080310 |
639 | NC_011982 | AAGG | 2 | 8 | 249411 | 249418 | 50 % | 0 % | 50 % | 0 % | 222080310 |
640 | NC_011982 | TCGA | 2 | 8 | 249913 | 249920 | 25 % | 25 % | 25 % | 25 % | 222080311 |
641 | NC_011982 | CGAT | 2 | 8 | 250080 | 250087 | 25 % | 25 % | 25 % | 25 % | 222080312 |
642 | NC_011982 | GATG | 2 | 8 | 250498 | 250505 | 25 % | 25 % | 50 % | 0 % | 222080312 |
643 | NC_011982 | ATTC | 2 | 8 | 250862 | 250869 | 25 % | 50 % | 0 % | 25 % | 222080312 |
644 | NC_011982 | GCAC | 2 | 8 | 251275 | 251282 | 25 % | 0 % | 25 % | 50 % | 222080313 |
645 | NC_011982 | CGTT | 2 | 8 | 251485 | 251492 | 0 % | 50 % | 25 % | 25 % | 222080313 |
646 | NC_011982 | GCCG | 2 | 8 | 251708 | 251715 | 0 % | 0 % | 50 % | 50 % | 222080314 |
647 | NC_011982 | TACA | 2 | 8 | 251933 | 251940 | 50 % | 25 % | 0 % | 25 % | 222080314 |
648 | NC_011982 | ACAT | 2 | 8 | 252183 | 252190 | 50 % | 25 % | 0 % | 25 % | 222080314 |
649 | NC_011982 | CGAG | 2 | 8 | 252499 | 252506 | 25 % | 0 % | 50 % | 25 % | 222080314 |
650 | NC_011982 | GCCA | 2 | 8 | 252519 | 252526 | 25 % | 0 % | 25 % | 50 % | 222080314 |
651 | NC_011982 | TGAT | 2 | 8 | 253561 | 253568 | 25 % | 50 % | 25 % | 0 % | 222080316 |
652 | NC_011982 | GGCA | 2 | 8 | 254048 | 254055 | 25 % | 0 % | 50 % | 25 % | 222080317 |
653 | NC_011982 | CCGC | 2 | 8 | 254476 | 254483 | 0 % | 0 % | 25 % | 75 % | 222080317 |
654 | NC_011982 | GTCG | 2 | 8 | 254602 | 254609 | 0 % | 25 % | 50 % | 25 % | 222080317 |
655 | NC_011982 | CCAG | 2 | 8 | 255525 | 255532 | 25 % | 0 % | 25 % | 50 % | 222080317 |
656 | NC_011982 | ATCG | 2 | 8 | 255895 | 255902 | 25 % | 25 % | 25 % | 25 % | 222080317 |
657 | NC_011982 | CGTC | 2 | 8 | 256050 | 256057 | 0 % | 25 % | 25 % | 50 % | 222080317 |
658 | NC_011982 | CCAG | 2 | 8 | 256339 | 256346 | 25 % | 0 % | 25 % | 50 % | 222080318 |
659 | NC_011982 | CGAG | 2 | 8 | 256856 | 256863 | 25 % | 0 % | 50 % | 25 % | 222080319 |
660 | NC_011982 | ATGA | 2 | 8 | 256978 | 256985 | 50 % | 25 % | 25 % | 0 % | 222080320 |
661 | NC_011982 | CGCC | 2 | 8 | 257533 | 257540 | 0 % | 0 % | 25 % | 75 % | 222080320 |
662 | NC_011982 | TCGG | 2 | 8 | 257955 | 257962 | 0 % | 25 % | 50 % | 25 % | 222080321 |
663 | NC_011982 | TAGG | 2 | 8 | 258346 | 258353 | 25 % | 25 % | 50 % | 0 % | 222080321 |
664 | NC_011982 | AATT | 2 | 8 | 258682 | 258689 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
665 | NC_011982 | CAGC | 2 | 8 | 258794 | 258801 | 25 % | 0 % | 25 % | 50 % | Non-Coding |