MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Agrobacterium vitis S4 plasmid pAtS4e

Total Repeats: 30

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_011981	TGAAAG	2	12	3783	3794	50 %	16.67 %	33.33 %	0 %	Non-Coding
2	NC_011981	CTGCGG	2	12	9519	9530	0 %	16.67 %	50 %	33.33 %	Non-Coding
3	NC_011981	GTCTCC	2	12	11794	11805	0 %	33.33 %	16.67 %	50 %	Non-Coding
4	NC_011981	GTGAAG	2	12	40537	40548	33.33 %	16.67 %	50 %	0 %	Non-Coding
5	NC_011981	AAGGTC	2	12	51988	51999	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
6	NC_011981	ATATTT	2	12	62325	62336	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_011981	GCGATT	2	12	100493	100504	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
8	NC_011981	TCAGGT	2	12	101807	101818	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
9	NC_011981	AAAGCC	2	12	110299	110310	50 %	0 %	16.67 %	33.33 %	Non-Coding
10	NC_011981	AGGATC	2	12	112032	112043	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
11	NC_011981	GACGTC	2	12	113835	113846	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
12	NC_011981	TGATCA	2	12	122130	122141	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
13	NC_011981	AGTTGG	2	12	148796	148807	16.67 %	33.33 %	50 %	0 %	Non-Coding
14	NC_011981	CGCCTG	2	12	172144	172155	0 %	16.67 %	33.33 %	50 %	Non-Coding
15	NC_011981	CAAGGC	2	12	173316	173327	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_011981	GCCTGC	2	12	173816	173827	0 %	16.67 %	33.33 %	50 %	Non-Coding
17	NC_011981	CACTGG	2	12	180723	180734	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
18	NC_011981	TCGATT	2	12	244858	244869	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
19	NC_011981	AAACGA	2	12	245025	245036	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
20	NC_011981	GTGCAA	2	12	245707	245718	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
21	NC_011981	ACCCCG	2	12	278683	278694	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
22	NC_011981	TCAGCA	2	12	294590	294601	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
23	NC_011981	AGGATG	2	12	350378	350389	33.33 %	16.67 %	50 %	0 %	Non-Coding
24	NC_011981	GAGGTC	2	12	369947	369958	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
25	NC_011981	CACGCA	2	12	406860	406871	33.33 %	0 %	16.67 %	50 %	Non-Coding
26	NC_011981	TCGCTC	2	12	451410	451421	0 %	33.33 %	16.67 %	50 %	Non-Coding
27	NC_011981	TGAATC	2	12	454237	454248	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
28	NC_011981	TCCAGG	2	12	529377	529388	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
29	NC_011981	ATCGAT	2	12	548021	548032	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
30	NC_011981	CCCAAT	2	12	601309	601320	33.33 %	16.67 %	0 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.