Penta-nucleotide Repeats of Lactobacillus casei str. Zhang plasmid plca36
Total Repeats: 30
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011352 | AAGCG | 2 | 10 | 1546 | 1555 | 40 % | 0 % | 40 % | 20 % | 209401010 |
2 | NC_011352 | ACAAA | 2 | 10 | 1980 | 1989 | 80 % | 0 % | 0 % | 20 % | 209401012 |
3 | NC_011352 | CTCAA | 2 | 10 | 2151 | 2160 | 40 % | 20 % | 0 % | 40 % | 209401012 |
4 | NC_011352 | CGGAT | 2 | 10 | 3972 | 3981 | 20 % | 20 % | 40 % | 20 % | 209401015 |
5 | NC_011352 | TAAAA | 2 | 10 | 5416 | 5425 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
6 | NC_011352 | TAGCT | 2 | 10 | 5514 | 5523 | 20 % | 40 % | 20 % | 20 % | 209401016 |
7 | NC_011352 | AAAGA | 2 | 10 | 9583 | 9592 | 80 % | 0 % | 20 % | 0 % | 209401021 |
8 | NC_011352 | TAAAC | 2 | 10 | 9829 | 9838 | 60 % | 20 % | 0 % | 20 % | 209401021 |
9 | NC_011352 | CGAAT | 2 | 10 | 12970 | 12979 | 40 % | 20 % | 20 % | 20 % | 209401024 |
10 | NC_011352 | GTTCT | 2 | 10 | 13159 | 13168 | 0 % | 60 % | 20 % | 20 % | 209401025 |
11 | NC_011352 | AACAA | 2 | 10 | 13821 | 13830 | 80 % | 0 % | 0 % | 20 % | 209401026 |
12 | NC_011352 | GCAAG | 2 | 10 | 18158 | 18167 | 40 % | 0 % | 40 % | 20 % | 209401032 |
13 | NC_011352 | TACCT | 2 | 10 | 19292 | 19301 | 20 % | 40 % | 0 % | 40 % | 209401032 |
14 | NC_011352 | ATTTA | 2 | 10 | 19950 | 19959 | 40 % | 60 % | 0 % | 0 % | 209401034 |
15 | NC_011352 | TAAAT | 2 | 10 | 20803 | 20812 | 60 % | 40 % | 0 % | 0 % | 209401034 |
16 | NC_011352 | TATAA | 2 | 10 | 20947 | 20956 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
17 | NC_011352 | AGTCA | 2 | 10 | 21264 | 21273 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
18 | NC_011352 | AATTT | 2 | 10 | 21525 | 21534 | 40 % | 60 % | 0 % | 0 % | 209401035 |
19 | NC_011352 | ATTAT | 2 | 10 | 22070 | 22079 | 40 % | 60 % | 0 % | 0 % | 209401035 |
20 | NC_011352 | GAAAT | 2 | 10 | 23886 | 23895 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
21 | NC_011352 | ATCCT | 2 | 10 | 24594 | 24603 | 20 % | 40 % | 0 % | 40 % | 209401039 |
22 | NC_011352 | TATAA | 2 | 10 | 26329 | 26338 | 60 % | 40 % | 0 % | 0 % | 209401040 |
23 | NC_011352 | CCTCA | 2 | 10 | 28288 | 28297 | 20 % | 20 % | 0 % | 60 % | 209401041 |
24 | NC_011352 | CATGC | 2 | 10 | 30169 | 30178 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
25 | NC_011352 | TAAAA | 2 | 10 | 31123 | 31132 | 80 % | 20 % | 0 % | 0 % | 209401044 |
26 | NC_011352 | CTTTT | 2 | 10 | 32113 | 32122 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
27 | NC_011352 | CAACC | 2 | 10 | 32918 | 32927 | 40 % | 0 % | 0 % | 60 % | Non-Coding |
28 | NC_011352 | TATGA | 2 | 10 | 35342 | 35351 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
29 | NC_011352 | TTGTA | 2 | 10 | 35646 | 35655 | 20 % | 60 % | 20 % | 0 % | 209401052 |
30 | NC_011352 | CTAAA | 2 | 10 | 36011 | 36020 | 60 % | 20 % | 0 % | 20 % | Non-Coding |