Tetra-nucleotide Coding Repeats of Lactobacillus casei str. Zhang plasmid plca36
Total Repeats: 91
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011352 | TTTA | 2 | 8 | 389 | 396 | 25 % | 75 % | 0 % | 0 % | 209401053 |
2 | NC_011352 | GATA | 2 | 8 | 1894 | 1901 | 50 % | 25 % | 25 % | 0 % | 209401011 |
3 | NC_011352 | TTGA | 2 | 8 | 2162 | 2169 | 25 % | 50 % | 25 % | 0 % | 209401012 |
4 | NC_011352 | ACGG | 2 | 8 | 2250 | 2257 | 25 % | 0 % | 50 % | 25 % | 209401012 |
5 | NC_011352 | AAGG | 2 | 8 | 3446 | 3453 | 50 % | 0 % | 50 % | 0 % | 209401015 |
6 | NC_011352 | GAAA | 2 | 8 | 3560 | 3567 | 75 % | 0 % | 25 % | 0 % | 209401015 |
7 | NC_011352 | AGAA | 2 | 8 | 3642 | 3649 | 75 % | 0 % | 25 % | 0 % | 209401015 |
8 | NC_011352 | CTAA | 2 | 8 | 3752 | 3759 | 50 % | 25 % | 0 % | 25 % | 209401015 |
9 | NC_011352 | TCAA | 2 | 8 | 3909 | 3916 | 50 % | 25 % | 0 % | 25 % | 209401015 |
10 | NC_011352 | GAAA | 2 | 8 | 4058 | 4065 | 75 % | 0 % | 25 % | 0 % | 209401015 |
11 | NC_011352 | TAAT | 2 | 8 | 4134 | 4141 | 50 % | 50 % | 0 % | 0 % | 209401015 |
12 | NC_011352 | TTAA | 2 | 8 | 4289 | 4296 | 50 % | 50 % | 0 % | 0 % | 209401015 |
13 | NC_011352 | CTCA | 2 | 8 | 4354 | 4361 | 25 % | 25 % | 0 % | 50 % | 209401015 |
14 | NC_011352 | TAAA | 2 | 8 | 4380 | 4387 | 75 % | 25 % | 0 % | 0 % | 209401015 |
15 | NC_011352 | AATT | 2 | 8 | 4461 | 4468 | 50 % | 50 % | 0 % | 0 % | 209401015 |
16 | NC_011352 | AACG | 2 | 8 | 4514 | 4521 | 50 % | 0 % | 25 % | 25 % | 209401015 |
17 | NC_011352 | TATC | 2 | 8 | 4991 | 4998 | 25 % | 50 % | 0 % | 25 % | 209401015 |
18 | NC_011352 | ACGA | 2 | 8 | 5295 | 5302 | 50 % | 0 % | 25 % | 25 % | 209401015 |
19 | NC_011352 | CGGG | 2 | 8 | 5772 | 5779 | 0 % | 0 % | 75 % | 25 % | 209401016 |
20 | NC_011352 | AGTT | 2 | 8 | 5873 | 5880 | 25 % | 50 % | 25 % | 0 % | 209401017 |
21 | NC_011352 | GTGA | 2 | 8 | 6103 | 6110 | 25 % | 25 % | 50 % | 0 % | 209401017 |
22 | NC_011352 | GCAG | 2 | 8 | 6399 | 6406 | 25 % | 0 % | 50 % | 25 % | 209401017 |
23 | NC_011352 | TATT | 2 | 8 | 6642 | 6649 | 25 % | 75 % | 0 % | 0 % | 209401018 |
24 | NC_011352 | GTAT | 2 | 8 | 7257 | 7264 | 25 % | 50 % | 25 % | 0 % | 209401020 |
25 | NC_011352 | ATTT | 2 | 8 | 7838 | 7845 | 25 % | 75 % | 0 % | 0 % | 209401021 |
26 | NC_011352 | AAAG | 2 | 8 | 8470 | 8477 | 75 % | 0 % | 25 % | 0 % | 209401021 |
27 | NC_011352 | TGGG | 2 | 8 | 8762 | 8769 | 0 % | 25 % | 75 % | 0 % | 209401021 |
28 | NC_011352 | TTGT | 2 | 8 | 9319 | 9326 | 0 % | 75 % | 25 % | 0 % | 209401021 |
29 | NC_011352 | AGGA | 2 | 8 | 9806 | 9813 | 50 % | 0 % | 50 % | 0 % | 209401021 |
30 | NC_011352 | TGAG | 2 | 8 | 9930 | 9937 | 25 % | 25 % | 50 % | 0 % | 209401022 |
31 | NC_011352 | AGCA | 2 | 8 | 9951 | 9958 | 50 % | 0 % | 25 % | 25 % | 209401022 |
32 | NC_011352 | ACGA | 2 | 8 | 10539 | 10546 | 50 % | 0 % | 25 % | 25 % | 209401022 |
33 | NC_011352 | AAGA | 2 | 8 | 11063 | 11070 | 75 % | 0 % | 25 % | 0 % | 209401022 |
34 | NC_011352 | AAAC | 2 | 8 | 11620 | 11627 | 75 % | 0 % | 0 % | 25 % | 209401023 |
35 | NC_011352 | CAAA | 2 | 8 | 11694 | 11701 | 75 % | 0 % | 0 % | 25 % | 209401023 |
36 | NC_011352 | CCAA | 2 | 8 | 12574 | 12581 | 50 % | 0 % | 0 % | 50 % | 209401024 |
37 | NC_011352 | TTAA | 2 | 8 | 13024 | 13031 | 50 % | 50 % | 0 % | 0 % | 209401024 |
38 | NC_011352 | AACC | 2 | 8 | 13261 | 13268 | 50 % | 0 % | 0 % | 50 % | 209401025 |
39 | NC_011352 | ACCA | 2 | 8 | 13348 | 13355 | 50 % | 0 % | 0 % | 50 % | 209401025 |
40 | NC_011352 | AACT | 2 | 8 | 13505 | 13512 | 50 % | 25 % | 0 % | 25 % | 209401026 |
41 | NC_011352 | ATTA | 2 | 8 | 13602 | 13609 | 50 % | 50 % | 0 % | 0 % | 209401026 |
42 | NC_011352 | AGCA | 2 | 8 | 13663 | 13670 | 50 % | 0 % | 25 % | 25 % | 209401026 |
43 | NC_011352 | GAAA | 2 | 8 | 13856 | 13863 | 75 % | 0 % | 25 % | 0 % | 209401026 |
44 | NC_011352 | GGCG | 2 | 8 | 14533 | 14540 | 0 % | 0 % | 75 % | 25 % | 209401028 |
45 | NC_011352 | AGCC | 2 | 8 | 15430 | 15437 | 25 % | 0 % | 25 % | 50 % | 209401028 |
46 | NC_011352 | ACTT | 2 | 8 | 15618 | 15625 | 25 % | 50 % | 0 % | 25 % | 209401028 |
47 | NC_011352 | TTGA | 2 | 8 | 15862 | 15869 | 25 % | 50 % | 25 % | 0 % | 209401029 |
48 | NC_011352 | TTAG | 2 | 8 | 17016 | 17023 | 25 % | 50 % | 25 % | 0 % | 209401031 |
49 | NC_011352 | GAAC | 2 | 8 | 17317 | 17324 | 50 % | 0 % | 25 % | 25 % | 209401031 |
50 | NC_011352 | TTAA | 2 | 8 | 18138 | 18145 | 50 % | 50 % | 0 % | 0 % | 209401032 |
51 | NC_011352 | GCCA | 2 | 8 | 18240 | 18247 | 25 % | 0 % | 25 % | 50 % | 209401032 |
52 | NC_011352 | AGCA | 2 | 8 | 18688 | 18695 | 50 % | 0 % | 25 % | 25 % | 209401032 |
53 | NC_011352 | ATTG | 2 | 8 | 19121 | 19128 | 25 % | 50 % | 25 % | 0 % | 209401032 |
54 | NC_011352 | TAAA | 2 | 8 | 19243 | 19250 | 75 % | 25 % | 0 % | 0 % | 209401032 |
55 | NC_011352 | CAAG | 2 | 8 | 19274 | 19281 | 50 % | 0 % | 25 % | 25 % | 209401032 |
56 | NC_011352 | GTTA | 2 | 8 | 19346 | 19353 | 25 % | 50 % | 25 % | 0 % | 209401032 |
57 | NC_011352 | AGCA | 2 | 8 | 20763 | 20770 | 50 % | 0 % | 25 % | 25 % | 209401034 |
58 | NC_011352 | GTCG | 2 | 8 | 22131 | 22138 | 0 % | 25 % | 50 % | 25 % | 209401035 |
59 | NC_011352 | AAAT | 2 | 8 | 23072 | 23079 | 75 % | 25 % | 0 % | 0 % | 209401036 |
60 | NC_011352 | AATG | 2 | 8 | 23465 | 23472 | 50 % | 25 % | 25 % | 0 % | 209401037 |
61 | NC_011352 | ATTA | 2 | 8 | 23529 | 23536 | 50 % | 50 % | 0 % | 0 % | 209401037 |
62 | NC_011352 | AAAT | 2 | 8 | 23572 | 23579 | 75 % | 25 % | 0 % | 0 % | 209401037 |
63 | NC_011352 | AAAT | 2 | 8 | 23798 | 23805 | 75 % | 25 % | 0 % | 0 % | 209401037 |
64 | NC_011352 | ACTA | 2 | 8 | 24068 | 24075 | 50 % | 25 % | 0 % | 25 % | 209401038 |
65 | NC_011352 | CCGG | 2 | 8 | 24373 | 24380 | 0 % | 0 % | 50 % | 50 % | 209401039 |
66 | NC_011352 | GATT | 2 | 8 | 24434 | 24441 | 25 % | 50 % | 25 % | 0 % | 209401039 |
67 | NC_011352 | CTAA | 2 | 8 | 24917 | 24924 | 50 % | 25 % | 0 % | 25 % | 209401039 |
68 | NC_011352 | CTTG | 2 | 8 | 25567 | 25574 | 0 % | 50 % | 25 % | 25 % | 209401040 |
69 | NC_011352 | CTTG | 2 | 8 | 25837 | 25844 | 0 % | 50 % | 25 % | 25 % | 209401040 |
70 | NC_011352 | TTGA | 2 | 8 | 26147 | 26154 | 25 % | 50 % | 25 % | 0 % | 209401040 |
71 | NC_011352 | TTTA | 2 | 8 | 26470 | 26477 | 25 % | 75 % | 0 % | 0 % | 209401040 |
72 | NC_011352 | ATGG | 2 | 8 | 26610 | 26617 | 25 % | 25 % | 50 % | 0 % | 209401040 |
73 | NC_011352 | TTTC | 2 | 8 | 26762 | 26769 | 0 % | 75 % | 0 % | 25 % | 209401040 |
74 | NC_011352 | GATA | 2 | 8 | 26886 | 26893 | 50 % | 25 % | 25 % | 0 % | 209401040 |
75 | NC_011352 | AAGC | 2 | 8 | 28397 | 28404 | 50 % | 0 % | 25 % | 25 % | 209401041 |
76 | NC_011352 | GAAA | 2 | 8 | 29713 | 29720 | 75 % | 0 % | 25 % | 0 % | 209401043 |
77 | NC_011352 | TTAA | 2 | 8 | 29729 | 29736 | 50 % | 50 % | 0 % | 0 % | 209401043 |
78 | NC_011352 | AAAG | 2 | 8 | 29803 | 29810 | 75 % | 0 % | 25 % | 0 % | 209401043 |
79 | NC_011352 | TGGT | 2 | 8 | 30006 | 30013 | 0 % | 50 % | 50 % | 0 % | 209401043 |
80 | NC_011352 | AAAT | 2 | 8 | 30699 | 30706 | 75 % | 25 % | 0 % | 0 % | 209401044 |
81 | NC_011352 | ATGT | 2 | 8 | 30753 | 30760 | 25 % | 50 % | 25 % | 0 % | 209401044 |
82 | NC_011352 | TAAC | 2 | 8 | 30858 | 30865 | 50 % | 25 % | 0 % | 25 % | 209401044 |
83 | NC_011352 | CTTC | 2 | 8 | 32485 | 32492 | 0 % | 50 % | 0 % | 50 % | 209401046 |
84 | NC_011352 | CATC | 2 | 8 | 32575 | 32582 | 25 % | 25 % | 0 % | 50 % | 209401046 |
85 | NC_011352 | TTTC | 2 | 8 | 32677 | 32684 | 0 % | 75 % | 0 % | 25 % | 209401046 |
86 | NC_011352 | TCTT | 2 | 8 | 33678 | 33685 | 0 % | 75 % | 0 % | 25 % | 209401047 |
87 | NC_011352 | ATTT | 2 | 8 | 33986 | 33993 | 25 % | 75 % | 0 % | 0 % | 209401048 |
88 | NC_011352 | TCAG | 2 | 8 | 34231 | 34238 | 25 % | 25 % | 25 % | 25 % | 209401049 |
89 | NC_011352 | TGAT | 2 | 8 | 34618 | 34625 | 25 % | 50 % | 25 % | 0 % | 209401050 |
90 | NC_011352 | AGAA | 2 | 8 | 35594 | 35601 | 75 % | 0 % | 25 % | 0 % | 209401052 |
91 | NC_011352 | CAAA | 2 | 8 | 35620 | 35627 | 75 % | 0 % | 0 % | 25 % | 209401052 |