Penta-nucleotide Non-Coding Repeats of Burkholderia cenocepacia J2315 chromosome 3
Total Repeats: 159
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011002 | CCGCG | 2 | 10 | 10616 | 10625 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
2 | NC_011002 | CGGCC | 2 | 10 | 20280 | 20289 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
3 | NC_011002 | CGGCG | 2 | 10 | 20366 | 20375 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
4 | NC_011002 | TGAAC | 2 | 10 | 35483 | 35492 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
5 | NC_011002 | GTTCA | 2 | 10 | 36912 | 36921 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
6 | NC_011002 | GCGAT | 2 | 10 | 38200 | 38209 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
7 | NC_011002 | GGCGG | 2 | 10 | 39752 | 39761 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
8 | NC_011002 | GCCGG | 2 | 10 | 42142 | 42151 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
9 | NC_011002 | GAGTC | 2 | 10 | 45518 | 45527 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
10 | NC_011002 | GCGAC | 2 | 10 | 56884 | 56893 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
11 | NC_011002 | GCGGG | 2 | 10 | 58853 | 58862 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
12 | NC_011002 | GGCCG | 2 | 10 | 60129 | 60138 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
13 | NC_011002 | TCGCG | 2 | 10 | 60379 | 60388 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
14 | NC_011002 | CCGAA | 2 | 10 | 78487 | 78496 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
15 | NC_011002 | CGCGC | 2 | 10 | 101727 | 101736 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
16 | NC_011002 | GCCGG | 2 | 10 | 106337 | 106346 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
17 | NC_011002 | ATCGC | 2 | 10 | 112167 | 112176 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
18 | NC_011002 | TCGTC | 2 | 10 | 112369 | 112378 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
19 | NC_011002 | GGGCG | 2 | 10 | 127837 | 127846 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
20 | NC_011002 | CTTTT | 3 | 15 | 131035 | 131049 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
21 | NC_011002 | GCGCG | 2 | 10 | 132436 | 132445 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
22 | NC_011002 | CCCGG | 2 | 10 | 133231 | 133240 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
23 | NC_011002 | TGCAA | 2 | 10 | 138032 | 138041 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
24 | NC_011002 | GAACG | 2 | 10 | 138235 | 138244 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
25 | NC_011002 | GCGCG | 2 | 10 | 138319 | 138328 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
26 | NC_011002 | ACGCC | 2 | 10 | 154392 | 154401 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
27 | NC_011002 | ACCGG | 2 | 10 | 162972 | 162981 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
28 | NC_011002 | GCAAC | 2 | 10 | 164383 | 164392 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
29 | NC_011002 | CGCGC | 2 | 10 | 164638 | 164647 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
30 | NC_011002 | GCTGC | 2 | 10 | 167455 | 167464 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
31 | NC_011002 | ATTTT | 2 | 10 | 174022 | 174031 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
32 | NC_011002 | CCGGA | 2 | 10 | 179863 | 179872 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
33 | NC_011002 | CGCGC | 2 | 10 | 186855 | 186864 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
34 | NC_011002 | CGTTC | 2 | 10 | 187636 | 187645 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
35 | NC_011002 | CACTG | 2 | 10 | 193779 | 193788 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
36 | NC_011002 | TCGCG | 2 | 10 | 196108 | 196117 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
37 | NC_011002 | ACGCG | 2 | 10 | 204564 | 204573 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
38 | NC_011002 | GATCG | 2 | 10 | 208701 | 208710 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
39 | NC_011002 | AAGCG | 2 | 10 | 213716 | 213725 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
40 | NC_011002 | TTGCG | 2 | 10 | 216945 | 216954 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
41 | NC_011002 | GCGCG | 2 | 10 | 217010 | 217019 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
42 | NC_011002 | CGGGC | 2 | 10 | 217263 | 217272 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
43 | NC_011002 | TGGAT | 2 | 10 | 233892 | 233901 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
44 | NC_011002 | GCGCG | 2 | 10 | 242978 | 242987 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
45 | NC_011002 | AAAAT | 2 | 10 | 243203 | 243212 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
46 | NC_011002 | TGAAT | 2 | 10 | 257221 | 257230 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
47 | NC_011002 | GCCGT | 2 | 10 | 258209 | 258218 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
48 | NC_011002 | CCGCG | 2 | 10 | 258320 | 258329 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
49 | NC_011002 | GCGCC | 2 | 10 | 264631 | 264640 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
50 | NC_011002 | GCGAG | 2 | 10 | 290231 | 290240 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
51 | NC_011002 | GCCAT | 2 | 10 | 299576 | 299585 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
52 | NC_011002 | ACGCG | 2 | 10 | 299609 | 299618 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
53 | NC_011002 | GCAAT | 2 | 10 | 325587 | 325596 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
54 | NC_011002 | GCCGG | 2 | 10 | 326823 | 326832 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
55 | NC_011002 | CGGCT | 2 | 10 | 335005 | 335014 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
56 | NC_011002 | CGATT | 2 | 10 | 335295 | 335304 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
57 | NC_011002 | CGGCA | 2 | 10 | 347543 | 347552 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
58 | NC_011002 | TTAAT | 2 | 10 | 357330 | 357339 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
59 | NC_011002 | GAGAG | 2 | 10 | 376296 | 376305 | 40 % | 0 % | 60 % | 0 % | Non-Coding |
60 | NC_011002 | GGCCG | 2 | 10 | 378773 | 378782 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
61 | NC_011002 | CGGTG | 2 | 10 | 383951 | 383960 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
62 | NC_011002 | CGGTG | 2 | 10 | 390035 | 390044 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
63 | NC_011002 | CCGAA | 2 | 10 | 391026 | 391035 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
64 | NC_011002 | CGGCA | 2 | 10 | 395010 | 395019 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
65 | NC_011002 | CGCGC | 2 | 10 | 410857 | 410866 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
66 | NC_011002 | GCGCC | 2 | 10 | 411889 | 411898 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
67 | NC_011002 | GCCGT | 2 | 10 | 414417 | 414426 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
68 | NC_011002 | CGTAC | 2 | 10 | 414494 | 414503 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
69 | NC_011002 | GCGAA | 2 | 10 | 422596 | 422605 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
70 | NC_011002 | CATTG | 2 | 10 | 423858 | 423867 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
71 | NC_011002 | TCGCC | 2 | 10 | 437803 | 437812 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
72 | NC_011002 | CATCG | 2 | 10 | 442224 | 442233 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
73 | NC_011002 | CGCGG | 2 | 10 | 442242 | 442251 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
74 | NC_011002 | GCGCT | 2 | 10 | 443954 | 443963 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
75 | NC_011002 | CCGGA | 2 | 10 | 446194 | 446203 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
76 | NC_011002 | CCGCG | 2 | 10 | 452043 | 452052 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
77 | NC_011002 | CGGTG | 2 | 10 | 452864 | 452873 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
78 | NC_011002 | TCGCG | 2 | 10 | 452970 | 452979 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
79 | NC_011002 | CGGGG | 2 | 10 | 465069 | 465078 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
80 | NC_011002 | TTCCG | 2 | 10 | 470524 | 470533 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
81 | NC_011002 | GGCGC | 2 | 10 | 471557 | 471566 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
82 | NC_011002 | GCCGC | 2 | 10 | 471599 | 471608 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
83 | NC_011002 | TTCCG | 2 | 10 | 477058 | 477067 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
84 | NC_011002 | GCCCC | 2 | 10 | 478270 | 478279 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
85 | NC_011002 | GCCGG | 2 | 10 | 485405 | 485414 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
86 | NC_011002 | CGCCC | 2 | 10 | 486789 | 486798 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
87 | NC_011002 | CGCTT | 2 | 10 | 488626 | 488635 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
88 | NC_011002 | GTCGC | 2 | 10 | 488663 | 488672 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
89 | NC_011002 | GTGCG | 2 | 10 | 492231 | 492240 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
90 | NC_011002 | ACGGC | 2 | 10 | 496444 | 496453 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
91 | NC_011002 | GCCCG | 2 | 10 | 502138 | 502147 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
92 | NC_011002 | TCGCC | 2 | 10 | 517870 | 517879 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
93 | NC_011002 | CCGCC | 2 | 10 | 525059 | 525068 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
94 | NC_011002 | CGGCG | 2 | 10 | 536915 | 536924 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
95 | NC_011002 | GCCTG | 2 | 10 | 537117 | 537126 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
96 | NC_011002 | GCGCC | 2 | 10 | 537213 | 537222 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
97 | NC_011002 | CGCGG | 2 | 10 | 541541 | 541550 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
98 | NC_011002 | CGTCG | 2 | 10 | 546639 | 546648 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
99 | NC_011002 | TCCCG | 2 | 10 | 546708 | 546717 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
100 | NC_011002 | CTCTC | 2 | 10 | 547152 | 547161 | 0 % | 40 % | 0 % | 60 % | Non-Coding |
101 | NC_011002 | GCGCC | 2 | 10 | 563544 | 563553 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
102 | NC_011002 | GCGCG | 2 | 10 | 573211 | 573220 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
103 | NC_011002 | CATAC | 2 | 10 | 600767 | 600776 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
104 | NC_011002 | CGATG | 2 | 10 | 608387 | 608396 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
105 | NC_011002 | GCCTT | 2 | 10 | 609785 | 609794 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
106 | NC_011002 | CATCC | 2 | 10 | 610920 | 610929 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
107 | NC_011002 | GCGAC | 2 | 10 | 611059 | 611068 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
108 | NC_011002 | CCGGG | 2 | 10 | 611806 | 611815 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
109 | NC_011002 | GGCCG | 2 | 10 | 623772 | 623781 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
110 | NC_011002 | GCCAC | 2 | 10 | 623926 | 623935 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
111 | NC_011002 | TCCGC | 2 | 10 | 626637 | 626646 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
112 | NC_011002 | CGATG | 2 | 10 | 626649 | 626658 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
113 | NC_011002 | AATCC | 2 | 10 | 630162 | 630171 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
114 | NC_011002 | CGATG | 2 | 10 | 632127 | 632136 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
115 | NC_011002 | GGGTC | 2 | 10 | 633010 | 633019 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
116 | NC_011002 | CGCGC | 2 | 10 | 663569 | 663578 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
117 | NC_011002 | TCAGT | 2 | 10 | 670868 | 670877 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
118 | NC_011002 | GCCGC | 2 | 10 | 674422 | 674431 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
119 | NC_011002 | CGATG | 2 | 10 | 681753 | 681762 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
120 | NC_011002 | CCGGC | 2 | 10 | 685809 | 685818 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
121 | NC_011002 | ACGCG | 2 | 10 | 698167 | 698176 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
122 | NC_011002 | CGCGC | 2 | 10 | 698287 | 698296 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
123 | NC_011002 | AGCCG | 2 | 10 | 705833 | 705842 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
124 | NC_011002 | GCGCC | 2 | 10 | 707323 | 707332 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
125 | NC_011002 | CGCGC | 2 | 10 | 707782 | 707791 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
126 | NC_011002 | TGCCG | 2 | 10 | 707968 | 707977 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
127 | NC_011002 | ACTGC | 2 | 10 | 712950 | 712959 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
128 | NC_011002 | GCGGG | 2 | 10 | 741861 | 741870 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
129 | NC_011002 | GCCAC | 2 | 10 | 746926 | 746935 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
130 | NC_011002 | TCACC | 2 | 10 | 748437 | 748446 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
131 | NC_011002 | ACGCA | 2 | 10 | 751538 | 751547 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
132 | NC_011002 | CTGCG | 2 | 10 | 755685 | 755694 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
133 | NC_011002 | GCCCC | 2 | 10 | 760536 | 760545 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
134 | NC_011002 | ACACG | 2 | 10 | 761689 | 761698 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
135 | NC_011002 | GTGTC | 2 | 10 | 764707 | 764716 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
136 | NC_011002 | GGCCG | 2 | 10 | 769781 | 769790 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
137 | NC_011002 | TTCAA | 2 | 10 | 774570 | 774579 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
138 | NC_011002 | GCGCC | 2 | 10 | 788967 | 788976 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
139 | NC_011002 | CGCAG | 2 | 10 | 789827 | 789836 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
140 | NC_011002 | CGGCG | 2 | 10 | 790617 | 790626 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
141 | NC_011002 | TCGCC | 2 | 10 | 794236 | 794245 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
142 | NC_011002 | GCCGG | 2 | 10 | 798232 | 798241 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
143 | NC_011002 | CGCCA | 2 | 10 | 798244 | 798253 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
144 | NC_011002 | CGCGA | 2 | 10 | 810367 | 810376 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
145 | NC_011002 | CACCG | 2 | 10 | 816128 | 816137 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
146 | NC_011002 | GATGA | 2 | 10 | 818632 | 818641 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
147 | NC_011002 | CTCCC | 2 | 10 | 820632 | 820641 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
148 | NC_011002 | TTCGC | 2 | 10 | 820950 | 820959 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
149 | NC_011002 | CACGA | 2 | 10 | 822180 | 822189 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
150 | NC_011002 | CGGCC | 2 | 10 | 831860 | 831869 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
151 | NC_011002 | GCGCG | 2 | 10 | 838728 | 838737 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
152 | NC_011002 | GCGGA | 2 | 10 | 841557 | 841566 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
153 | NC_011002 | CGGGG | 2 | 10 | 858465 | 858474 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
154 | NC_011002 | GGTCG | 2 | 10 | 859461 | 859470 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
155 | NC_011002 | GCCGT | 2 | 10 | 859498 | 859507 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
156 | NC_011002 | CGGCC | 2 | 10 | 866643 | 866652 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
157 | NC_011002 | CCGGG | 2 | 10 | 870600 | 870609 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
158 | NC_011002 | CAAAT | 2 | 10 | 873110 | 873119 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
159 | NC_011002 | CGGCG | 2 | 10 | 874445 | 874454 | 0 % | 0 % | 60 % | 40 % | Non-Coding |