Penta-nucleotide Coding Repeats of Comamonas testosteroni CNB-1 plasmid pCNB
Total Repeats: 56
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010935 | GCGCG | 2 | 10 | 1509 | 1518 | 0 % | 0 % | 60 % | 40 % | 190571923 |
2 | NC_010935 | CCGGC | 2 | 10 | 3339 | 3348 | 0 % | 0 % | 40 % | 60 % | 190571926 |
3 | NC_010935 | CGCTC | 2 | 10 | 3447 | 3456 | 0 % | 20 % | 20 % | 60 % | 190571926 |
4 | NC_010935 | CGGGC | 2 | 10 | 4315 | 4324 | 0 % | 0 % | 60 % | 40 % | 190571927 |
5 | NC_010935 | CGGGT | 2 | 10 | 4368 | 4377 | 0 % | 20 % | 60 % | 20 % | 190571927 |
6 | NC_010935 | CGTTG | 2 | 10 | 4808 | 4817 | 0 % | 40 % | 40 % | 20 % | 190571927 |
7 | NC_010935 | AAGGG | 2 | 10 | 5636 | 5645 | 40 % | 0 % | 60 % | 0 % | 190571929 |
8 | NC_010935 | CCGGC | 2 | 10 | 7395 | 7404 | 0 % | 0 % | 40 % | 60 % | 190571933 |
9 | NC_010935 | CGCGC | 2 | 10 | 8631 | 8640 | 0 % | 0 % | 40 % | 60 % | 190571935 |
10 | NC_010935 | ACGCA | 2 | 10 | 11986 | 11995 | 40 % | 0 % | 20 % | 40 % | 190571940 |
11 | NC_010935 | TGCGC | 2 | 10 | 11996 | 12005 | 0 % | 20 % | 40 % | 40 % | 190571940 |
12 | NC_010935 | CGTCG | 2 | 10 | 18628 | 18637 | 0 % | 20 % | 40 % | 40 % | 190571944 |
13 | NC_010935 | AACAC | 2 | 10 | 19892 | 19901 | 60 % | 0 % | 0 % | 40 % | 190571947 |
14 | NC_010935 | CTTCG | 2 | 10 | 20056 | 20065 | 0 % | 40 % | 20 % | 40 % | 190571947 |
15 | NC_010935 | AGGCG | 2 | 10 | 20718 | 20727 | 20 % | 0 % | 60 % | 20 % | 190571947 |
16 | NC_010935 | GCCTG | 2 | 10 | 22510 | 22519 | 0 % | 20 % | 40 % | 40 % | 190571950 |
17 | NC_010935 | GCGCT | 2 | 10 | 25036 | 25045 | 0 % | 20 % | 40 % | 40 % | 190571952 |
18 | NC_010935 | TCGCA | 2 | 10 | 25467 | 25476 | 20 % | 20 % | 20 % | 40 % | 190571952 |
19 | NC_010935 | GCTGT | 2 | 10 | 26039 | 26048 | 0 % | 40 % | 40 % | 20 % | 190571953 |
20 | NC_010935 | GGTCG | 2 | 10 | 27310 | 27319 | 0 % | 20 % | 60 % | 20 % | 190571954 |
21 | NC_010935 | TCGGC | 2 | 10 | 27483 | 27492 | 0 % | 20 % | 40 % | 40 % | 190571954 |
22 | NC_010935 | ATGTC | 2 | 10 | 29811 | 29820 | 20 % | 40 % | 20 % | 20 % | 190571957 |
23 | NC_010935 | GGACG | 2 | 10 | 30868 | 30877 | 20 % | 0 % | 60 % | 20 % | 190571958 |
24 | NC_010935 | GCGCG | 2 | 10 | 32220 | 32229 | 0 % | 0 % | 60 % | 40 % | 190571961 |
25 | NC_010935 | CTTCG | 2 | 10 | 33081 | 33090 | 0 % | 40 % | 20 % | 40 % | 190571962 |
26 | NC_010935 | GCTGC | 2 | 10 | 33341 | 33350 | 0 % | 20 % | 40 % | 40 % | 190571963 |
27 | NC_010935 | GTGTC | 2 | 10 | 33635 | 33644 | 0 % | 40 % | 40 % | 20 % | 190571963 |
28 | NC_010935 | CGTGC | 2 | 10 | 35280 | 35289 | 0 % | 20 % | 40 % | 40 % | 190571964 |
29 | NC_010935 | TGTTC | 2 | 10 | 37275 | 37284 | 0 % | 60 % | 20 % | 20 % | 190571965 |
30 | NC_010935 | GCTGC | 2 | 10 | 45237 | 45246 | 0 % | 20 % | 40 % | 40 % | 190571972 |
31 | NC_010935 | TGCCG | 2 | 10 | 48116 | 48125 | 0 % | 20 % | 40 % | 40 % | 190571975 |
32 | NC_010935 | GCAGC | 2 | 10 | 48881 | 48890 | 20 % | 0 % | 40 % | 40 % | 190571976 |
33 | NC_010935 | GTCGA | 2 | 10 | 49146 | 49155 | 20 % | 20 % | 40 % | 20 % | 190571977 |
34 | NC_010935 | CCGCG | 2 | 10 | 49988 | 49997 | 0 % | 0 % | 40 % | 60 % | 190571977 |
35 | NC_010935 | GAACC | 2 | 10 | 53533 | 53542 | 40 % | 0 % | 20 % | 40 % | 190571980 |
36 | NC_010935 | GCGTG | 2 | 10 | 54031 | 54040 | 0 % | 20 % | 60 % | 20 % | 190571981 |
37 | NC_010935 | CGCTG | 2 | 10 | 55489 | 55498 | 0 % | 20 % | 40 % | 40 % | 190571982 |
38 | NC_010935 | TCAGG | 2 | 10 | 57255 | 57264 | 20 % | 20 % | 40 % | 20 % | 190571985 |
39 | NC_010935 | GGTTC | 2 | 10 | 59852 | 59861 | 0 % | 40 % | 40 % | 20 % | 190571988 |
40 | NC_010935 | GCCCA | 2 | 10 | 63855 | 63864 | 20 % | 0 % | 20 % | 60 % | 190571989 |
41 | NC_010935 | CGCTG | 2 | 10 | 66949 | 66958 | 0 % | 20 % | 40 % | 40 % | 190571991 |
42 | NC_010935 | CAGCG | 2 | 10 | 67049 | 67058 | 20 % | 0 % | 40 % | 40 % | 190571991 |
43 | NC_010935 | CCCGG | 2 | 10 | 68625 | 68634 | 0 % | 0 % | 40 % | 60 % | 190571992 |
44 | NC_010935 | CATGG | 2 | 10 | 69251 | 69260 | 20 % | 20 % | 40 % | 20 % | 190571993 |
45 | NC_010935 | GCGCC | 2 | 10 | 69739 | 69748 | 0 % | 0 % | 40 % | 60 % | 190571994 |
46 | NC_010935 | CTGGC | 2 | 10 | 71086 | 71095 | 0 % | 20 % | 40 % | 40 % | 190571995 |
47 | NC_010935 | GCGCG | 2 | 10 | 71152 | 71161 | 0 % | 0 % | 60 % | 40 % | 190571995 |
48 | NC_010935 | GCGCG | 2 | 10 | 72663 | 72672 | 0 % | 0 % | 60 % | 40 % | 190571997 |
49 | NC_010935 | CGCTG | 2 | 10 | 73917 | 73926 | 0 % | 20 % | 40 % | 40 % | 190571983 |
50 | NC_010935 | CAGCG | 2 | 10 | 74017 | 74026 | 20 % | 0 % | 40 % | 40 % | 190571983 |
51 | NC_010935 | GCACC | 2 | 10 | 76864 | 76873 | 20 % | 0 % | 20 % | 60 % | 190571999 |
52 | NC_010935 | TGTTC | 2 | 10 | 82054 | 82063 | 0 % | 60 % | 20 % | 20 % | 190572000 |
53 | NC_010935 | CCGAT | 2 | 10 | 86906 | 86915 | 20 % | 20 % | 20 % | 40 % | 190572004 |
54 | NC_010935 | CACTT | 2 | 10 | 88334 | 88343 | 20 % | 40 % | 0 % | 40 % | 190572005 |
55 | NC_010935 | CGCTT | 2 | 10 | 89397 | 89406 | 0 % | 40 % | 20 % | 40 % | 190572005 |
56 | NC_010935 | CGGGT | 2 | 10 | 89811 | 89820 | 0 % | 20 % | 60 % | 20 % | 190572005 |