Hexa-nucleotide Non-Coding Repeats of Treponema pallidum subsp. pallidum SS14
Total Repeats: 34
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010741 | ATTGAA | 2 | 12 | 8547 | 8558 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
2 | NC_010741 | TTTCCG | 2 | 12 | 34160 | 34171 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
3 | NC_010741 | GCACGA | 2 | 12 | 59437 | 59448 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
4 | NC_010741 | CGCTTG | 2 | 12 | 92916 | 92927 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
5 | NC_010741 | TCTCAA | 2 | 12 | 125114 | 125125 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
6 | NC_010741 | CGGCTG | 2 | 12 | 148582 | 148593 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
7 | NC_010741 | GGCTGG | 2 | 12 | 150574 | 150585 | 0 % | 16.67 % | 66.67 % | 16.67 % | Non-Coding |
8 | NC_010741 | TCGGGC | 2 | 12 | 150589 | 150600 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
9 | NC_010741 | CTGCGG | 4 | 24 | 151793 | 151816 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
10 | NC_010741 | CGGCTC | 2 | 12 | 152298 | 152309 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
11 | NC_010741 | TAAAAA | 2 | 12 | 154211 | 154222 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
12 | NC_010741 | GTGTTT | 2 | 12 | 222847 | 222858 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
13 | NC_010741 | GTGCGA | 2 | 12 | 234700 | 234711 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
14 | NC_010741 | TCCTTC | 2 | 12 | 236081 | 236092 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
15 | NC_010741 | GTTTGT | 2 | 12 | 259129 | 259140 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
16 | NC_010741 | GTGCGA | 2 | 12 | 283141 | 283152 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
17 | NC_010741 | TCCTTC | 2 | 12 | 284522 | 284533 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
18 | NC_010741 | TGATGT | 2 | 12 | 304976 | 304987 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
19 | NC_010741 | CCGGAG | 2 | 12 | 333010 | 333021 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
20 | NC_010741 | CAGCTG | 2 | 12 | 333234 | 333245 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
21 | NC_010741 | GCTGTG | 2 | 12 | 341055 | 341066 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
22 | NC_010741 | AATATA | 2 | 12 | 355140 | 355151 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
23 | NC_010741 | TTTCCG | 2 | 12 | 372403 | 372414 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
24 | NC_010741 | CGTGCG | 2 | 12 | 525218 | 525229 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
25 | NC_010741 | TAACCC | 2 | 12 | 562122 | 562133 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
26 | NC_010741 | ATACTG | 2 | 12 | 562216 | 562227 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
27 | NC_010741 | TTCTCC | 2 | 12 | 699016 | 699027 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
28 | NC_010741 | CAGAGA | 2 | 12 | 853435 | 853446 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
29 | NC_010741 | AAAGAC | 2 | 12 | 882269 | 882280 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
30 | NC_010741 | GGCGCA | 2 | 12 | 907512 | 907523 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
31 | NC_010741 | AAGCTC | 2 | 12 | 947858 | 947869 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
32 | NC_010741 | GAGCAG | 2 | 12 | 995309 | 995320 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
33 | NC_010741 | TATGAG | 2 | 12 | 1080890 | 1080901 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
34 | NC_010741 | CGCCTT | 2 | 12 | 1116434 | 1116445 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |