Hexa-nucleotide Coding Repeats of Burkholderia ambifaria MC40-6 plasmid pBMC401
Total Repeats: 132
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010553 | CGTCGG | 2 | 12 | 2277 | 2288 | 0 % | 16.67 % | 50 % | 33.33 % | 172064527 |
2 | NC_010553 | CTGGTA | 2 | 12 | 4800 | 4811 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064529 |
3 | NC_010553 | GACGCG | 2 | 12 | 4909 | 4920 | 16.67 % | 0 % | 50 % | 33.33 % | 172064529 |
4 | NC_010553 | CTTCGA | 2 | 12 | 5440 | 5451 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 172064530 |
5 | NC_010553 | GCCAGC | 2 | 12 | 7110 | 7121 | 16.67 % | 0 % | 33.33 % | 50 % | 172064530 |
6 | NC_010553 | CAGCGA | 2 | 12 | 7735 | 7746 | 33.33 % | 0 % | 33.33 % | 33.33 % | 172064531 |
7 | NC_010553 | CGAGAG | 2 | 12 | 14985 | 14996 | 33.33 % | 0 % | 50 % | 16.67 % | 172064539 |
8 | NC_010553 | CGAAGC | 2 | 12 | 21170 | 21181 | 33.33 % | 0 % | 33.33 % | 33.33 % | 172064550 |
9 | NC_010553 | CGACTT | 2 | 12 | 22902 | 22913 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 172064553 |
10 | NC_010553 | GCTTCG | 2 | 12 | 24223 | 24234 | 0 % | 33.33 % | 33.33 % | 33.33 % | 172064553 |
11 | NC_010553 | TGGCGA | 2 | 12 | 27612 | 27623 | 16.67 % | 16.67 % | 50 % | 16.67 % | 172064557 |
12 | NC_010553 | CCTCGC | 2 | 12 | 34374 | 34385 | 0 % | 16.67 % | 16.67 % | 66.67 % | 172064566 |
13 | NC_010553 | CGCGAG | 2 | 12 | 34630 | 34641 | 16.67 % | 0 % | 50 % | 33.33 % | 172064567 |
14 | NC_010553 | GCATCT | 2 | 12 | 36393 | 36404 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 172064568 |
15 | NC_010553 | CCTTGT | 2 | 12 | 36588 | 36599 | 0 % | 50 % | 16.67 % | 33.33 % | 172064568 |
16 | NC_010553 | AGCTCG | 2 | 12 | 40331 | 40342 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064574 |
17 | NC_010553 | AAGTCG | 2 | 12 | 40588 | 40599 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 172064574 |
18 | NC_010553 | GGTCCC | 2 | 12 | 41091 | 41102 | 0 % | 16.67 % | 33.33 % | 50 % | 172064574 |
19 | NC_010553 | TTGGCA | 2 | 12 | 43437 | 43448 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064578 |
20 | NC_010553 | TGGCGG | 2 | 12 | 44120 | 44131 | 0 % | 16.67 % | 66.67 % | 16.67 % | 172064579 |
21 | NC_010553 | GCGTTG | 2 | 12 | 44485 | 44496 | 0 % | 33.33 % | 50 % | 16.67 % | 172064579 |
22 | NC_010553 | TGCGGT | 2 | 12 | 47004 | 47015 | 0 % | 33.33 % | 50 % | 16.67 % | 172064581 |
23 | NC_010553 | TTGACC | 2 | 12 | 48505 | 48516 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 172064583 |
24 | NC_010553 | GCCGAG | 2 | 12 | 49058 | 49069 | 16.67 % | 0 % | 50 % | 33.33 % | 172064584 |
25 | NC_010553 | CGACGC | 2 | 12 | 51810 | 51821 | 16.67 % | 0 % | 33.33 % | 50 % | 172064585 |
26 | NC_010553 | GTGCCG | 2 | 12 | 57825 | 57836 | 0 % | 16.67 % | 50 % | 33.33 % | 172064591 |
27 | NC_010553 | AATCGA | 2 | 12 | 58054 | 58065 | 50 % | 16.67 % | 16.67 % | 16.67 % | 172064591 |
28 | NC_010553 | TTGCTG | 2 | 12 | 59745 | 59756 | 0 % | 50 % | 33.33 % | 16.67 % | 172064593 |
29 | NC_010553 | TCGGTG | 2 | 12 | 60995 | 61006 | 0 % | 33.33 % | 50 % | 16.67 % | 172064594 |
30 | NC_010553 | TCGGTC | 2 | 12 | 62502 | 62513 | 0 % | 33.33 % | 33.33 % | 33.33 % | 172064596 |
31 | NC_010553 | GCCGCG | 2 | 12 | 65802 | 65813 | 0 % | 0 % | 50 % | 50 % | 172064599 |
32 | NC_010553 | GGACCT | 2 | 12 | 67505 | 67516 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064600 |
33 | NC_010553 | GTCGCC | 2 | 12 | 67584 | 67595 | 0 % | 16.67 % | 33.33 % | 50 % | 172064600 |
34 | NC_010553 | GCCTCG | 2 | 12 | 68373 | 68384 | 0 % | 16.67 % | 33.33 % | 50 % | 172064601 |
35 | NC_010553 | GCGGTC | 2 | 12 | 74411 | 74422 | 0 % | 16.67 % | 50 % | 33.33 % | 172064605 |
36 | NC_010553 | GTCGAC | 2 | 12 | 75972 | 75983 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064606 |
37 | NC_010553 | GGTCGA | 2 | 12 | 76040 | 76051 | 16.67 % | 16.67 % | 50 % | 16.67 % | 172064606 |
38 | NC_010553 | GGTCGA | 2 | 12 | 76946 | 76957 | 16.67 % | 16.67 % | 50 % | 16.67 % | 172064606 |
39 | NC_010553 | CGGTGC | 2 | 12 | 77224 | 77235 | 0 % | 16.67 % | 50 % | 33.33 % | 172064606 |
40 | NC_010553 | TTGAGC | 2 | 12 | 81945 | 81956 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064609 |
41 | NC_010553 | GCGTAC | 2 | 12 | 90868 | 90879 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064619 |
42 | NC_010553 | CCGGAT | 2 | 12 | 90888 | 90899 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064619 |
43 | NC_010553 | TCGACG | 2 | 12 | 91052 | 91063 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064619 |
44 | NC_010553 | AGCGCC | 2 | 12 | 91256 | 91267 | 16.67 % | 0 % | 33.33 % | 50 % | 172064619 |
45 | NC_010553 | TCGACA | 2 | 12 | 91765 | 91776 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 172064620 |
46 | NC_010553 | GCAGGC | 2 | 12 | 92434 | 92445 | 16.67 % | 0 % | 50 % | 33.33 % | 172064621 |
47 | NC_010553 | GCCGCT | 2 | 12 | 93873 | 93884 | 0 % | 16.67 % | 33.33 % | 50 % | 172064622 |
48 | NC_010553 | CGTGTA | 2 | 12 | 94752 | 94763 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064624 |
49 | NC_010553 | TGCGCA | 2 | 12 | 97011 | 97022 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064625 |
50 | NC_010553 | CATGTT | 2 | 12 | 100553 | 100564 | 16.67 % | 50 % | 16.67 % | 16.67 % | 172064627 |
51 | NC_010553 | ATCTTC | 2 | 12 | 101754 | 101765 | 16.67 % | 50 % | 0 % | 33.33 % | 172064629 |
52 | NC_010553 | TCGACG | 2 | 12 | 106918 | 106929 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
53 | NC_010553 | TCGACG | 2 | 12 | 107014 | 107025 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
54 | NC_010553 | TCGACG | 2 | 12 | 107110 | 107121 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
55 | NC_010553 | TCGACG | 2 | 12 | 107206 | 107217 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
56 | NC_010553 | TCGACG | 2 | 12 | 107302 | 107313 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
57 | NC_010553 | TCGACG | 2 | 12 | 107398 | 107409 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
58 | NC_010553 | TCGACG | 2 | 12 | 107494 | 107505 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
59 | NC_010553 | TCGACG | 2 | 12 | 107782 | 107793 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
60 | NC_010553 | TCGACG | 2 | 12 | 107878 | 107889 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
61 | NC_010553 | GTCGAC | 2 | 12 | 108009 | 108020 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064631 |
62 | NC_010553 | GTCGAC | 2 | 12 | 108834 | 108845 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064632 |
63 | NC_010553 | AAGAGG | 2 | 12 | 115637 | 115648 | 50 % | 0 % | 50 % | 0 % | 172064640 |
64 | NC_010553 | AAGTTG | 2 | 12 | 121360 | 121371 | 33.33 % | 33.33 % | 33.33 % | 0 % | 172064643 |
65 | NC_010553 | GCGCTT | 2 | 12 | 124073 | 124084 | 0 % | 33.33 % | 33.33 % | 33.33 % | 172064646 |
66 | NC_010553 | GGACAT | 2 | 12 | 126464 | 126475 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 172064649 |
67 | NC_010553 | CACGGG | 2 | 12 | 132574 | 132585 | 16.67 % | 0 % | 50 % | 33.33 % | 172064653 |
68 | NC_010553 | CGGGAC | 2 | 12 | 133008 | 133019 | 16.67 % | 0 % | 50 % | 33.33 % | 172064654 |
69 | NC_010553 | GATGTC | 2 | 12 | 138326 | 138337 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064658 |
70 | NC_010553 | GATGCA | 2 | 12 | 138431 | 138442 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 172064658 |
71 | NC_010553 | AACTGG | 2 | 12 | 140694 | 140705 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 172064659 |
72 | NC_010553 | GCGCTG | 2 | 12 | 150717 | 150728 | 0 % | 16.67 % | 50 % | 33.33 % | 172064664 |
73 | NC_010553 | GCGCGG | 2 | 12 | 152924 | 152935 | 0 % | 0 % | 66.67 % | 33.33 % | 172064665 |
74 | NC_010553 | CGATGC | 2 | 12 | 153182 | 153193 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064665 |
75 | NC_010553 | CGGGCA | 2 | 12 | 163157 | 163168 | 16.67 % | 0 % | 50 % | 33.33 % | 172064670 |
76 | NC_010553 | TGTCGG | 2 | 12 | 163421 | 163432 | 0 % | 33.33 % | 50 % | 16.67 % | 172064671 |
77 | NC_010553 | CGGCAT | 2 | 12 | 166069 | 166080 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064672 |
78 | NC_010553 | AACGCG | 2 | 12 | 166248 | 166259 | 33.33 % | 0 % | 33.33 % | 33.33 % | 172064672 |
79 | NC_010553 | GTATTC | 2 | 12 | 168231 | 168242 | 16.67 % | 50 % | 16.67 % | 16.67 % | 172064675 |
80 | NC_010553 | TCGTTG | 2 | 12 | 168418 | 168429 | 0 % | 50 % | 33.33 % | 16.67 % | 172064675 |
81 | NC_010553 | GCGAAC | 2 | 12 | 171960 | 171971 | 33.33 % | 0 % | 33.33 % | 33.33 % | 172064677 |
82 | NC_010553 | GGGGCG | 2 | 12 | 175397 | 175408 | 0 % | 0 % | 83.33 % | 16.67 % | 172064681 |
83 | NC_010553 | GCGCCT | 2 | 12 | 175866 | 175877 | 0 % | 16.67 % | 33.33 % | 50 % | 172064681 |
84 | NC_010553 | GATCGC | 2 | 12 | 176459 | 176470 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064682 |
85 | NC_010553 | TGCTCG | 2 | 12 | 179449 | 179460 | 0 % | 33.33 % | 33.33 % | 33.33 % | 172064682 |
86 | NC_010553 | GATTTC | 2 | 12 | 180102 | 180113 | 16.67 % | 50 % | 16.67 % | 16.67 % | 172064682 |
87 | NC_010553 | TCGACA | 2 | 12 | 182149 | 182160 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 172064685 |
88 | NC_010553 | GGGCGA | 2 | 12 | 182531 | 182542 | 16.67 % | 0 % | 66.67 % | 16.67 % | 172064685 |
89 | NC_010553 | ATCGGG | 2 | 12 | 185171 | 185182 | 16.67 % | 16.67 % | 50 % | 16.67 % | 172064686 |
90 | NC_010553 | ATTACG | 2 | 12 | 187674 | 187685 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 172064687 |
91 | NC_010553 | TTCGCC | 2 | 12 | 189424 | 189435 | 0 % | 33.33 % | 16.67 % | 50 % | 172064688 |
92 | NC_010553 | GGCGAA | 2 | 12 | 189618 | 189629 | 33.33 % | 0 % | 50 % | 16.67 % | 172064688 |
93 | NC_010553 | GCAACT | 2 | 12 | 191917 | 191928 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 172064690 |
94 | NC_010553 | TCGGCG | 2 | 12 | 191982 | 191993 | 0 % | 16.67 % | 50 % | 33.33 % | 172064690 |
95 | NC_010553 | ACGCCC | 2 | 12 | 193035 | 193046 | 16.67 % | 0 % | 16.67 % | 66.67 % | 172064691 |
96 | NC_010553 | GCAGCC | 2 | 12 | 194820 | 194831 | 16.67 % | 0 % | 33.33 % | 50 % | 172064692 |
97 | NC_010553 | GTCGCT | 2 | 12 | 196221 | 196232 | 0 % | 33.33 % | 33.33 % | 33.33 % | 172064694 |
98 | NC_010553 | GGCGCT | 2 | 12 | 200109 | 200120 | 0 % | 16.67 % | 50 % | 33.33 % | 172064696 |
99 | NC_010553 | GACGGC | 2 | 12 | 200368 | 200379 | 16.67 % | 0 % | 50 % | 33.33 % | 172064696 |
100 | NC_010553 | GACGCG | 2 | 12 | 200476 | 200487 | 16.67 % | 0 % | 50 % | 33.33 % | 172064696 |
101 | NC_010553 | CGACCC | 2 | 12 | 205240 | 205251 | 16.67 % | 0 % | 16.67 % | 66.67 % | 172064701 |
102 | NC_010553 | TCAAAA | 2 | 12 | 205934 | 205945 | 66.67 % | 16.67 % | 0 % | 16.67 % | 172064702 |
103 | NC_010553 | GGTTCG | 2 | 12 | 212217 | 212228 | 0 % | 33.33 % | 50 % | 16.67 % | 172064709 |
104 | NC_010553 | CACGTT | 2 | 12 | 213500 | 213511 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 172064711 |
105 | NC_010553 | CGCTTT | 2 | 12 | 215585 | 215596 | 0 % | 50 % | 16.67 % | 33.33 % | 172064713 |
106 | NC_010553 | GCTTGC | 2 | 12 | 217286 | 217297 | 0 % | 33.33 % | 33.33 % | 33.33 % | 172064717 |
107 | NC_010553 | CGCAAG | 2 | 12 | 234479 | 234490 | 33.33 % | 0 % | 33.33 % | 33.33 % | 172064749 |
108 | NC_010553 | GCACGA | 2 | 12 | 243422 | 243433 | 33.33 % | 0 % | 33.33 % | 33.33 % | 172064757 |
109 | NC_010553 | GCGCTT | 2 | 12 | 244411 | 244422 | 0 % | 33.33 % | 33.33 % | 33.33 % | 172064759 |
110 | NC_010553 | CTTCGA | 2 | 12 | 245639 | 245650 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 172064760 |
111 | NC_010553 | CGGCAG | 2 | 12 | 247158 | 247169 | 16.67 % | 0 % | 50 % | 33.33 % | 172064762 |
112 | NC_010553 | GTTGTC | 2 | 12 | 248366 | 248377 | 0 % | 50 % | 33.33 % | 16.67 % | 172064762 |
113 | NC_010553 | CGACGG | 2 | 12 | 249996 | 250007 | 16.67 % | 0 % | 50 % | 33.33 % | 172064764 |
114 | NC_010553 | ACGTTG | 2 | 12 | 250412 | 250423 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064764 |
115 | NC_010553 | AGCGCG | 2 | 12 | 253142 | 253153 | 16.67 % | 0 % | 50 % | 33.33 % | 172064767 |
116 | NC_010553 | TCGCCG | 2 | 12 | 255951 | 255962 | 0 % | 16.67 % | 33.33 % | 50 % | 172064767 |
117 | NC_010553 | ATTGAT | 2 | 12 | 260034 | 260045 | 33.33 % | 50 % | 16.67 % | 0 % | 172064767 |
118 | NC_010553 | GCGCGA | 2 | 12 | 261719 | 261730 | 16.67 % | 0 % | 50 % | 33.33 % | 172064769 |
119 | NC_010553 | GCGATC | 2 | 12 | 263106 | 263117 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064770 |
120 | NC_010553 | GCCGTC | 2 | 12 | 267394 | 267405 | 0 % | 16.67 % | 33.33 % | 50 % | 172064771 |
121 | NC_010553 | TGCACG | 2 | 12 | 268729 | 268740 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064772 |
122 | NC_010553 | AAGATC | 2 | 12 | 269437 | 269448 | 50 % | 16.67 % | 16.67 % | 16.67 % | 172064773 |
123 | NC_010553 | ACGTTG | 2 | 12 | 272544 | 272555 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064774 |
124 | NC_010553 | ACGTTG | 2 | 12 | 275286 | 275297 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 172064774 |
125 | NC_010553 | ATCCGC | 2 | 12 | 282090 | 282101 | 16.67 % | 16.67 % | 16.67 % | 50 % | 172064778 |
126 | NC_010553 | ATGGCC | 2 | 12 | 285537 | 285548 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064781 |
127 | NC_010553 | ACGGCG | 2 | 12 | 286455 | 286466 | 16.67 % | 0 % | 50 % | 33.33 % | 172064782 |
128 | NC_010553 | GTCGCC | 2 | 12 | 287017 | 287028 | 0 % | 16.67 % | 33.33 % | 50 % | 172064784 |
129 | NC_010553 | GCACGA | 2 | 12 | 289907 | 289918 | 33.33 % | 0 % | 33.33 % | 33.33 % | 172064786 |
130 | NC_010553 | CGAGCG | 2 | 12 | 297299 | 297310 | 16.67 % | 0 % | 50 % | 33.33 % | 172064794 |
131 | NC_010553 | CGGCCA | 2 | 12 | 298109 | 298120 | 16.67 % | 0 % | 33.33 % | 50 % | 172064794 |
132 | NC_010553 | GCGATC | 2 | 12 | 300280 | 300291 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 172064797 |