Tetra-nucleotide Repeats of Clavibacter michiganensis subsp. sepedonicus plasmid pCS1
Total Repeats: 162
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010399 | CCGT | 2 | 8 | 8 | 15 | 0 % | 25 % | 25 % | 50 % | 189016632 |
2 | NC_010399 | GAGC | 2 | 8 | 195 | 202 | 25 % | 0 % | 50 % | 25 % | 189016632 |
3 | NC_010399 | TCCG | 2 | 8 | 337 | 344 | 0 % | 25 % | 25 % | 50 % | 189016632 |
4 | NC_010399 | CGGC | 2 | 8 | 526 | 533 | 0 % | 0 % | 50 % | 50 % | 189016632 |
5 | NC_010399 | ACGC | 2 | 8 | 698 | 705 | 25 % | 0 % | 25 % | 50 % | 189016632 |
6 | NC_010399 | CGAG | 2 | 8 | 869 | 876 | 25 % | 0 % | 50 % | 25 % | 189016632 |
7 | NC_010399 | GCCG | 2 | 8 | 1046 | 1053 | 0 % | 0 % | 50 % | 50 % | 189016632 |
8 | NC_010399 | GCCG | 2 | 8 | 1056 | 1063 | 0 % | 0 % | 50 % | 50 % | 189016632 |
9 | NC_010399 | CGGC | 2 | 8 | 1304 | 1311 | 0 % | 0 % | 50 % | 50 % | 189016632 |
10 | NC_010399 | GCCG | 2 | 8 | 1312 | 1319 | 0 % | 0 % | 50 % | 50 % | 189016632 |
11 | NC_010399 | GCCG | 2 | 8 | 1347 | 1354 | 0 % | 0 % | 50 % | 50 % | 189016632 |
12 | NC_010399 | CAGA | 2 | 8 | 1556 | 1563 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
13 | NC_010399 | AGAT | 2 | 8 | 1642 | 1649 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
14 | NC_010399 | AAGA | 2 | 8 | 1668 | 1675 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
15 | NC_010399 | GGCT | 2 | 8 | 1923 | 1930 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
16 | NC_010399 | CGGC | 2 | 8 | 2308 | 2315 | 0 % | 0 % | 50 % | 50 % | 189016633 |
17 | NC_010399 | CGGA | 2 | 8 | 2339 | 2346 | 25 % | 0 % | 50 % | 25 % | 189016633 |
18 | NC_010399 | CACG | 2 | 8 | 2463 | 2470 | 25 % | 0 % | 25 % | 50 % | 189016633 |
19 | NC_010399 | TGGC | 2 | 8 | 2489 | 2496 | 0 % | 25 % | 50 % | 25 % | 189016633 |
20 | NC_010399 | CAGC | 2 | 8 | 2823 | 2830 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
21 | NC_010399 | CGGC | 2 | 8 | 2840 | 2847 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
22 | NC_010399 | GCAG | 2 | 8 | 3650 | 3657 | 25 % | 0 % | 50 % | 25 % | 189016635 |
23 | NC_010399 | GTAC | 2 | 8 | 3942 | 3949 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
24 | NC_010399 | CGAG | 2 | 8 | 4284 | 4291 | 25 % | 0 % | 50 % | 25 % | 189016636 |
25 | NC_010399 | CGCC | 2 | 8 | 4483 | 4490 | 0 % | 0 % | 25 % | 75 % | 189016636 |
26 | NC_010399 | GGAA | 2 | 8 | 4664 | 4671 | 50 % | 0 % | 50 % | 0 % | 189016636 |
27 | NC_010399 | GTTC | 2 | 8 | 5091 | 5098 | 0 % | 50 % | 25 % | 25 % | 189016638 |
28 | NC_010399 | GCTG | 2 | 8 | 5254 | 5261 | 0 % | 25 % | 50 % | 25 % | 189016638 |
29 | NC_010399 | GGGT | 2 | 8 | 5349 | 5356 | 0 % | 25 % | 75 % | 0 % | 189016638 |
30 | NC_010399 | GGTG | 2 | 8 | 5562 | 5569 | 0 % | 25 % | 75 % | 0 % | 189016638 |
31 | NC_010399 | CCGG | 2 | 8 | 5610 | 5617 | 0 % | 0 % | 50 % | 50 % | 189016638 |
32 | NC_010399 | TGCG | 2 | 8 | 6207 | 6214 | 0 % | 25 % | 50 % | 25 % | 189016638 |
33 | NC_010399 | CCGG | 2 | 8 | 6316 | 6323 | 0 % | 0 % | 50 % | 50 % | 189016638 |
34 | NC_010399 | GCTG | 2 | 8 | 6478 | 6485 | 0 % | 25 % | 50 % | 25 % | 189016638 |
35 | NC_010399 | TCCC | 2 | 8 | 6530 | 6537 | 0 % | 25 % | 0 % | 75 % | 189016638 |
36 | NC_010399 | TCGC | 2 | 8 | 6632 | 6639 | 0 % | 25 % | 25 % | 50 % | 189016638 |
37 | NC_010399 | CCCG | 2 | 8 | 6808 | 6815 | 0 % | 0 % | 25 % | 75 % | 189016638 |
38 | NC_010399 | GCCG | 2 | 8 | 6847 | 6854 | 0 % | 0 % | 50 % | 50 % | 189016638 |
39 | NC_010399 | GCCG | 2 | 8 | 7051 | 7058 | 0 % | 0 % | 50 % | 50 % | 189016638 |
40 | NC_010399 | CGAG | 2 | 8 | 7134 | 7141 | 25 % | 0 % | 50 % | 25 % | 189016638 |
41 | NC_010399 | TCCC | 2 | 8 | 8005 | 8012 | 0 % | 25 % | 0 % | 75 % | 189016640 |
42 | NC_010399 | TCGC | 2 | 8 | 8829 | 8836 | 0 % | 25 % | 25 % | 50 % | 189016640 |
43 | NC_010399 | GAGC | 2 | 8 | 9309 | 9316 | 25 % | 0 % | 50 % | 25 % | 189016641 |
44 | NC_010399 | GCTG | 2 | 8 | 9764 | 9771 | 0 % | 25 % | 50 % | 25 % | 189016642 |
45 | NC_010399 | CGGC | 2 | 8 | 10520 | 10527 | 0 % | 0 % | 50 % | 50 % | 189016643 |
46 | NC_010399 | GTGA | 2 | 8 | 10533 | 10540 | 25 % | 25 % | 50 % | 0 % | 189016643 |
47 | NC_010399 | CGAG | 2 | 8 | 11143 | 11150 | 25 % | 0 % | 50 % | 25 % | 189016643 |
48 | NC_010399 | AGCA | 2 | 8 | 11511 | 11518 | 50 % | 0 % | 25 % | 25 % | 189016643 |
49 | NC_010399 | CGAC | 2 | 8 | 11550 | 11557 | 25 % | 0 % | 25 % | 50 % | 189016644 |
50 | NC_010399 | GCCG | 2 | 8 | 11992 | 11999 | 0 % | 0 % | 50 % | 50 % | 189016644 |
51 | NC_010399 | CCGG | 2 | 8 | 12654 | 12661 | 0 % | 0 % | 50 % | 50 % | 189016644 |
52 | NC_010399 | TCGC | 2 | 8 | 13010 | 13017 | 0 % | 25 % | 25 % | 50 % | 189016644 |
53 | NC_010399 | GAAG | 2 | 8 | 13207 | 13214 | 50 % | 0 % | 50 % | 0 % | 189016644 |
54 | NC_010399 | GCGG | 2 | 8 | 13248 | 13255 | 0 % | 0 % | 75 % | 25 % | 189016645 |
55 | NC_010399 | ACCG | 2 | 8 | 13560 | 13567 | 25 % | 0 % | 25 % | 50 % | 189016645 |
56 | NC_010399 | GGCC | 2 | 8 | 14169 | 14176 | 0 % | 0 % | 50 % | 50 % | 189016645 |
57 | NC_010399 | CCGT | 2 | 8 | 14425 | 14432 | 0 % | 25 % | 25 % | 50 % | 189016645 |
58 | NC_010399 | CGGC | 2 | 8 | 15109 | 15116 | 0 % | 0 % | 50 % | 50 % | 189016646 |
59 | NC_010399 | GCGG | 2 | 8 | 15991 | 15998 | 0 % | 0 % | 75 % | 25 % | 189016647 |
60 | NC_010399 | GCCC | 2 | 8 | 16581 | 16588 | 0 % | 0 % | 25 % | 75 % | 189016648 |
61 | NC_010399 | GCCG | 2 | 8 | 16638 | 16645 | 0 % | 0 % | 50 % | 50 % | 189016648 |
62 | NC_010399 | GCGG | 2 | 8 | 16723 | 16730 | 0 % | 0 % | 75 % | 25 % | 189016648 |
63 | NC_010399 | GTCG | 2 | 8 | 16824 | 16831 | 0 % | 25 % | 50 % | 25 % | 189016648 |
64 | NC_010399 | GCCG | 2 | 8 | 17024 | 17031 | 0 % | 0 % | 50 % | 50 % | 189016649 |
65 | NC_010399 | GACG | 2 | 8 | 17447 | 17454 | 25 % | 0 % | 50 % | 25 % | 189016649 |
66 | NC_010399 | GCCG | 2 | 8 | 17528 | 17535 | 0 % | 0 % | 50 % | 50 % | 189016649 |
67 | NC_010399 | GGAA | 2 | 8 | 17658 | 17665 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
68 | NC_010399 | CGCC | 2 | 8 | 17953 | 17960 | 0 % | 0 % | 25 % | 75 % | 189016650 |
69 | NC_010399 | CAGG | 2 | 8 | 18149 | 18156 | 25 % | 0 % | 50 % | 25 % | 189016650 |
70 | NC_010399 | GTTG | 2 | 8 | 18351 | 18358 | 0 % | 50 % | 50 % | 0 % | 189016651 |
71 | NC_010399 | GCGG | 2 | 8 | 18441 | 18448 | 0 % | 0 % | 75 % | 25 % | 189016651 |
72 | NC_010399 | GGAT | 2 | 8 | 18620 | 18627 | 25 % | 25 % | 50 % | 0 % | 189016651 |
73 | NC_010399 | TCCG | 2 | 8 | 18736 | 18743 | 0 % | 25 % | 25 % | 50 % | 189016651 |
74 | NC_010399 | CCCG | 2 | 8 | 18947 | 18954 | 0 % | 0 % | 25 % | 75 % | 189016651 |
75 | NC_010399 | ACGG | 2 | 8 | 19603 | 19610 | 25 % | 0 % | 50 % | 25 % | 189016652 |
76 | NC_010399 | GGGT | 2 | 8 | 19724 | 19731 | 0 % | 25 % | 75 % | 0 % | 189016652 |
77 | NC_010399 | AGTT | 2 | 8 | 20259 | 20266 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
78 | NC_010399 | GATG | 2 | 8 | 20382 | 20389 | 25 % | 25 % | 50 % | 0 % | 189016653 |
79 | NC_010399 | AAGG | 2 | 8 | 20631 | 20638 | 50 % | 0 % | 50 % | 0 % | 189016653 |
80 | NC_010399 | GCGG | 2 | 8 | 20692 | 20699 | 0 % | 0 % | 75 % | 25 % | 189016653 |
81 | NC_010399 | CAGG | 2 | 8 | 21070 | 21077 | 25 % | 0 % | 50 % | 25 % | 189016653 |
82 | NC_010399 | TCGG | 2 | 8 | 21457 | 21464 | 0 % | 25 % | 50 % | 25 % | 189016654 |
83 | NC_010399 | CGAG | 2 | 8 | 21606 | 21613 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
84 | NC_010399 | CGAC | 2 | 8 | 22014 | 22021 | 25 % | 0 % | 25 % | 50 % | 189016656 |
85 | NC_010399 | GAGC | 2 | 8 | 22044 | 22051 | 25 % | 0 % | 50 % | 25 % | 189016656 |
86 | NC_010399 | CCGA | 2 | 8 | 22346 | 22353 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
87 | NC_010399 | GCGG | 2 | 8 | 23135 | 23142 | 0 % | 0 % | 75 % | 25 % | 189016657 |
88 | NC_010399 | CGGA | 2 | 8 | 23347 | 23354 | 25 % | 0 % | 50 % | 25 % | 189016657 |
89 | NC_010399 | ATCC | 2 | 8 | 23463 | 23470 | 25 % | 25 % | 0 % | 50 % | 189016657 |
90 | NC_010399 | CCGC | 2 | 8 | 23642 | 23649 | 0 % | 0 % | 25 % | 75 % | 189016657 |
91 | NC_010399 | CAAC | 2 | 8 | 23732 | 23739 | 50 % | 0 % | 0 % | 50 % | 189016657 |
92 | NC_010399 | GTCG | 2 | 8 | 23920 | 23927 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
93 | NC_010399 | CATG | 2 | 8 | 23959 | 23966 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
94 | NC_010399 | GGGA | 2 | 8 | 24066 | 24073 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
95 | NC_010399 | CAGT | 2 | 8 | 24098 | 24105 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
96 | NC_010399 | GATA | 2 | 8 | 24595 | 24602 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
97 | NC_010399 | TGGA | 2 | 8 | 24845 | 24852 | 25 % | 25 % | 50 % | 0 % | 189016659 |
98 | NC_010399 | ATTG | 2 | 8 | 25011 | 25018 | 25 % | 50 % | 25 % | 0 % | 189016659 |
99 | NC_010399 | GGGT | 2 | 8 | 25032 | 25039 | 0 % | 25 % | 75 % | 0 % | 189016659 |
100 | NC_010399 | TGCG | 2 | 8 | 25409 | 25416 | 0 % | 25 % | 50 % | 25 % | 189016660 |
101 | NC_010399 | GACC | 2 | 8 | 26393 | 26400 | 25 % | 0 % | 25 % | 50 % | 189016662 |
102 | NC_010399 | GCCT | 2 | 8 | 26432 | 26439 | 0 % | 25 % | 25 % | 50 % | 189016662 |
103 | NC_010399 | CACC | 2 | 8 | 27174 | 27181 | 25 % | 0 % | 0 % | 75 % | 189016664 |
104 | NC_010399 | GCCG | 2 | 8 | 27576 | 27583 | 0 % | 0 % | 50 % | 50 % | 189016665 |
105 | NC_010399 | CCGC | 2 | 8 | 27740 | 27747 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
106 | NC_010399 | GTCG | 2 | 8 | 27781 | 27788 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
107 | NC_010399 | CGAT | 2 | 8 | 27867 | 27874 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
108 | NC_010399 | AGTT | 2 | 8 | 27893 | 27900 | 25 % | 50 % | 25 % | 0 % | 189016666 |
109 | NC_010399 | TGCC | 2 | 8 | 28068 | 28075 | 0 % | 25 % | 25 % | 50 % | 189016666 |
110 | NC_010399 | GCCG | 2 | 8 | 28723 | 28730 | 0 % | 0 % | 50 % | 50 % | 189016666 |
111 | NC_010399 | CTGA | 2 | 8 | 28792 | 28799 | 25 % | 25 % | 25 % | 25 % | 189016666 |
112 | NC_010399 | CGTC | 2 | 8 | 28889 | 28896 | 0 % | 25 % | 25 % | 50 % | 189016666 |
113 | NC_010399 | CGTG | 2 | 8 | 29330 | 29337 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
114 | NC_010399 | GCCC | 2 | 8 | 29480 | 29487 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
115 | NC_010399 | CCGC | 5 | 20 | 29494 | 29513 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
116 | NC_010399 | CGGC | 2 | 8 | 30947 | 30954 | 0 % | 0 % | 50 % | 50 % | 189016669 |
117 | NC_010399 | CGTC | 2 | 8 | 31209 | 31216 | 0 % | 25 % | 25 % | 50 % | 189016670 |
118 | NC_010399 | CGCT | 2 | 8 | 32484 | 32491 | 0 % | 25 % | 25 % | 50 % | 189016673 |
119 | NC_010399 | CGGT | 2 | 8 | 33083 | 33090 | 0 % | 25 % | 50 % | 25 % | 189016674 |
120 | NC_010399 | GTCG | 2 | 8 | 34200 | 34207 | 0 % | 25 % | 50 % | 25 % | 189016677 |
121 | NC_010399 | ATCC | 2 | 8 | 34495 | 34502 | 25 % | 25 % | 0 % | 50 % | 189016677 |
122 | NC_010399 | GGCC | 2 | 8 | 34560 | 34567 | 0 % | 0 % | 50 % | 50 % | 189016677 |
123 | NC_010399 | ACCG | 2 | 8 | 34635 | 34642 | 25 % | 0 % | 25 % | 50 % | 189016677 |
124 | NC_010399 | GCCG | 2 | 8 | 34963 | 34970 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
125 | NC_010399 | GGCG | 2 | 8 | 35871 | 35878 | 0 % | 0 % | 75 % | 25 % | 189016679 |
126 | NC_010399 | CGCT | 2 | 8 | 36767 | 36774 | 0 % | 25 % | 25 % | 50 % | 189016679 |
127 | NC_010399 | CGAG | 2 | 8 | 37082 | 37089 | 25 % | 0 % | 50 % | 25 % | 189016679 |
128 | NC_010399 | GCCC | 2 | 8 | 37345 | 37352 | 0 % | 0 % | 25 % | 75 % | 189016680 |
129 | NC_010399 | CGTC | 2 | 8 | 37800 | 37807 | 0 % | 25 % | 25 % | 50 % | 189016681 |
130 | NC_010399 | CGGC | 2 | 8 | 38044 | 38051 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
131 | NC_010399 | GCCC | 2 | 8 | 38784 | 38791 | 0 % | 0 % | 25 % | 75 % | 189016682 |
132 | NC_010399 | CCGG | 2 | 8 | 39144 | 39151 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
133 | NC_010399 | CCGG | 2 | 8 | 39163 | 39170 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
134 | NC_010399 | GGCA | 2 | 8 | 39254 | 39261 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
135 | NC_010399 | ACCG | 2 | 8 | 40100 | 40107 | 25 % | 0 % | 25 % | 50 % | 189016684 |
136 | NC_010399 | ACGC | 2 | 8 | 40845 | 40852 | 25 % | 0 % | 25 % | 50 % | 189016685 |
137 | NC_010399 | ACGC | 2 | 8 | 41454 | 41461 | 25 % | 0 % | 25 % | 50 % | 189016687 |
138 | NC_010399 | CGAC | 2 | 8 | 41764 | 41771 | 25 % | 0 % | 25 % | 50 % | 189016687 |
139 | NC_010399 | GCCG | 2 | 8 | 41846 | 41853 | 0 % | 0 % | 50 % | 50 % | 189016687 |
140 | NC_010399 | GGCT | 2 | 8 | 42492 | 42499 | 0 % | 25 % | 50 % | 25 % | 189016688 |
141 | NC_010399 | TCGA | 2 | 8 | 42826 | 42833 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
142 | NC_010399 | TGGG | 2 | 8 | 42914 | 42921 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
143 | NC_010399 | TGCG | 2 | 8 | 42961 | 42968 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
144 | NC_010399 | GCCT | 2 | 8 | 43302 | 43309 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
145 | NC_010399 | CCGG | 2 | 8 | 43680 | 43687 | 0 % | 0 % | 50 % | 50 % | 189016689 |
146 | NC_010399 | CGAC | 2 | 8 | 43856 | 43863 | 25 % | 0 % | 25 % | 50 % | 189016689 |
147 | NC_010399 | GGCG | 2 | 8 | 43865 | 43872 | 0 % | 0 % | 75 % | 25 % | 189016689 |
148 | NC_010399 | GCGA | 2 | 8 | 44203 | 44210 | 25 % | 0 % | 50 % | 25 % | 189016689 |
149 | NC_010399 | GCAA | 2 | 8 | 44635 | 44642 | 50 % | 0 % | 25 % | 25 % | 189016689 |
150 | NC_010399 | CCGA | 2 | 8 | 44873 | 44880 | 25 % | 0 % | 25 % | 50 % | 189016689 |
151 | NC_010399 | TCCG | 2 | 8 | 45096 | 45103 | 0 % | 25 % | 25 % | 50 % | 189016689 |
152 | NC_010399 | TGAC | 2 | 8 | 45296 | 45303 | 25 % | 25 % | 25 % | 25 % | 189016689 |
153 | NC_010399 | GACG | 2 | 8 | 45758 | 45765 | 25 % | 0 % | 50 % | 25 % | 189016690 |
154 | NC_010399 | GGGA | 2 | 8 | 45918 | 45925 | 25 % | 0 % | 75 % | 0 % | 189016690 |
155 | NC_010399 | CCCG | 2 | 8 | 46916 | 46923 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
156 | NC_010399 | CCAC | 2 | 8 | 47166 | 47173 | 25 % | 0 % | 0 % | 75 % | 189016691 |
157 | NC_010399 | CGAC | 2 | 8 | 47388 | 47395 | 25 % | 0 % | 25 % | 50 % | 189016691 |
158 | NC_010399 | GTCG | 2 | 8 | 48018 | 48025 | 0 % | 25 % | 50 % | 25 % | 189016692 |
159 | NC_010399 | GTCG | 2 | 8 | 48219 | 48226 | 0 % | 25 % | 50 % | 25 % | 189016692 |
160 | NC_010399 | GGCT | 2 | 8 | 48879 | 48886 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
161 | NC_010399 | CTGC | 2 | 8 | 49312 | 49319 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
162 | NC_010399 | CGAG | 2 | 8 | 50214 | 50221 | 25 % | 0 % | 50 % | 25 % | Non-Coding |