Penta-nucleotide Coding Repeats of Halobacterium salinarum R1 plasmid PHS2
Total Repeats: 82
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010369 | ATCGG | 2 | 10 | 7610 | 7619 | 20 % | 20 % | 40 % | 20 % | 169237611 |
2 | NC_010369 | ACTTC | 2 | 10 | 9436 | 9445 | 20 % | 40 % | 0 % | 40 % | 169237613 |
3 | NC_010369 | CGTCT | 2 | 10 | 9860 | 9869 | 0 % | 40 % | 20 % | 40 % | 169237613 |
4 | NC_010369 | TCCGC | 2 | 10 | 10965 | 10974 | 0 % | 20 % | 20 % | 60 % | 169237615 |
5 | NC_010369 | ATGAG | 2 | 10 | 13559 | 13568 | 40 % | 20 % | 40 % | 0 % | 169237617 |
6 | NC_010369 | GTTTC | 2 | 10 | 14509 | 14518 | 0 % | 60 % | 20 % | 20 % | 169237618 |
7 | NC_010369 | GCGTT | 2 | 10 | 18644 | 18653 | 0 % | 40 % | 40 % | 20 % | 169237623 |
8 | NC_010369 | CACTC | 2 | 10 | 21112 | 21121 | 20 % | 20 % | 0 % | 60 % | 169237626 |
9 | NC_010369 | CCAGG | 2 | 10 | 22769 | 22778 | 20 % | 0 % | 40 % | 40 % | 169237626 |
10 | NC_010369 | AGTCC | 2 | 10 | 23155 | 23164 | 20 % | 20 % | 20 % | 40 % | 169237627 |
11 | NC_010369 | GATGC | 2 | 10 | 24316 | 24325 | 20 % | 20 % | 40 % | 20 % | 169237627 |
12 | NC_010369 | ACTCC | 2 | 10 | 29771 | 29780 | 20 % | 20 % | 0 % | 60 % | 169237634 |
13 | NC_010369 | CCACG | 2 | 10 | 30272 | 30281 | 20 % | 0 % | 20 % | 60 % | 169237634 |
14 | NC_010369 | TGAAC | 2 | 10 | 31048 | 31057 | 40 % | 20 % | 20 % | 20 % | 169237635 |
15 | NC_010369 | GACTC | 2 | 10 | 37251 | 37260 | 20 % | 20 % | 20 % | 40 % | 169237641 |
16 | NC_010369 | ACTGA | 2 | 10 | 40645 | 40654 | 40 % | 20 % | 20 % | 20 % | 169237647 |
17 | NC_010369 | CGTGA | 2 | 10 | 43274 | 43283 | 20 % | 20 % | 40 % | 20 % | 169237650 |
18 | NC_010369 | TCGCC | 2 | 10 | 47595 | 47604 | 0 % | 20 % | 20 % | 60 % | 169237656 |
19 | NC_010369 | ACCGG | 2 | 10 | 47892 | 47901 | 20 % | 0 % | 40 % | 40 % | 169237656 |
20 | NC_010369 | CCCAG | 2 | 10 | 49110 | 49119 | 20 % | 0 % | 20 % | 60 % | 169237658 |
21 | NC_010369 | GATTC | 2 | 10 | 49474 | 49483 | 20 % | 40 % | 20 % | 20 % | 169237658 |
22 | NC_010369 | CGAGG | 2 | 10 | 51528 | 51537 | 20 % | 0 % | 60 % | 20 % | 169237662 |
23 | NC_010369 | GCTCG | 2 | 10 | 53379 | 53388 | 0 % | 20 % | 40 % | 40 % | 169237665 |
24 | NC_010369 | CGGGC | 2 | 10 | 58066 | 58075 | 0 % | 0 % | 60 % | 40 % | 169237672 |
25 | NC_010369 | AGTTC | 2 | 10 | 61598 | 61607 | 20 % | 40 % | 20 % | 20 % | 169237679 |
26 | NC_010369 | ACTGC | 2 | 10 | 63166 | 63175 | 20 % | 20 % | 20 % | 40 % | 169237680 |
27 | NC_010369 | CAATA | 2 | 10 | 63785 | 63794 | 60 % | 20 % | 0 % | 20 % | 169237681 |
28 | NC_010369 | TCACC | 2 | 10 | 72826 | 72835 | 20 % | 20 % | 0 % | 60 % | 169237689 |
29 | NC_010369 | TCGCC | 2 | 10 | 73138 | 73147 | 0 % | 20 % | 20 % | 60 % | 169237689 |
30 | NC_010369 | CGGCG | 2 | 10 | 80807 | 80816 | 0 % | 0 % | 60 % | 40 % | 169237695 |
31 | NC_010369 | CTCGA | 2 | 10 | 80945 | 80954 | 20 % | 20 % | 20 % | 40 % | 169237695 |
32 | NC_010369 | AAGCG | 2 | 10 | 83913 | 83922 | 40 % | 0 % | 40 % | 20 % | 169237697 |
33 | NC_010369 | CGGCG | 2 | 10 | 85165 | 85174 | 0 % | 0 % | 60 % | 40 % | 169237698 |
34 | NC_010369 | TCGAT | 2 | 10 | 85304 | 85313 | 20 % | 40 % | 20 % | 20 % | 169237698 |
35 | NC_010369 | CTGAA | 2 | 10 | 87073 | 87082 | 40 % | 20 % | 20 % | 20 % | 169237699 |
36 | NC_010369 | AGTTC | 2 | 10 | 90405 | 90414 | 20 % | 40 % | 20 % | 20 % | 169237704 |
37 | NC_010369 | ACGTC | 2 | 10 | 96321 | 96330 | 20 % | 20 % | 20 % | 40 % | 169237712 |
38 | NC_010369 | CGCTA | 2 | 10 | 97432 | 97441 | 20 % | 20 % | 20 % | 40 % | 169237713 |
39 | NC_010369 | GTTCG | 2 | 10 | 99538 | 99547 | 0 % | 40 % | 40 % | 20 % | 169237716 |
40 | NC_010369 | GAACG | 2 | 10 | 101278 | 101287 | 40 % | 0 % | 40 % | 20 % | 169237717 |
41 | NC_010369 | TCGTC | 2 | 10 | 114120 | 114129 | 0 % | 40 % | 20 % | 40 % | 169237732 |
42 | NC_010369 | CGCGA | 2 | 10 | 116608 | 116617 | 20 % | 0 % | 40 % | 40 % | 169237735 |
43 | NC_010369 | CGTCA | 2 | 10 | 117288 | 117297 | 20 % | 20 % | 20 % | 40 % | 169237736 |
44 | NC_010369 | CTGTG | 2 | 10 | 117366 | 117375 | 0 % | 40 % | 40 % | 20 % | 169237736 |
45 | NC_010369 | GTTCG | 2 | 10 | 120911 | 120920 | 0 % | 40 % | 40 % | 20 % | 169237739 |
46 | NC_010369 | CTCCG | 2 | 10 | 121301 | 121310 | 0 % | 20 % | 20 % | 60 % | 169237739 |
47 | NC_010369 | AGTTC | 2 | 10 | 123319 | 123328 | 20 % | 40 % | 20 % | 20 % | 169237740 |
48 | NC_010369 | TGGGA | 2 | 10 | 127738 | 127747 | 20 % | 20 % | 60 % | 0 % | 169237743 |
49 | NC_010369 | AACCA | 2 | 10 | 128970 | 128979 | 60 % | 0 % | 0 % | 40 % | 169237744 |
50 | NC_010369 | ATCGA | 2 | 10 | 130564 | 130573 | 40 % | 20 % | 20 % | 20 % | 169237746 |
51 | NC_010369 | AGCCG | 2 | 10 | 133550 | 133559 | 20 % | 0 % | 40 % | 40 % | 169237749 |
52 | NC_010369 | GTTGA | 2 | 10 | 139716 | 139725 | 20 % | 40 % | 40 % | 0 % | 169237761 |
53 | NC_010369 | TCCCA | 2 | 10 | 145451 | 145460 | 20 % | 20 % | 0 % | 60 % | 169237767 |
54 | NC_010369 | CCCGA | 2 | 10 | 145910 | 145919 | 20 % | 0 % | 20 % | 60 % | 169237767 |
55 | NC_010369 | ATCGT | 2 | 10 | 147444 | 147453 | 20 % | 40 % | 20 % | 20 % | 169237769 |
56 | NC_010369 | GAGGT | 2 | 10 | 151540 | 151549 | 20 % | 20 % | 60 % | 0 % | 169237773 |
57 | NC_010369 | GTGGA | 2 | 10 | 153916 | 153925 | 20 % | 20 % | 60 % | 0 % | 169237776 |
58 | NC_010369 | CGTCG | 2 | 10 | 158767 | 158776 | 0 % | 20 % | 40 % | 40 % | 169237779 |
59 | NC_010369 | AGTTC | 2 | 10 | 161648 | 161657 | 20 % | 40 % | 20 % | 20 % | 169237781 |
60 | NC_010369 | AGTTG | 2 | 10 | 163360 | 163369 | 20 % | 40 % | 40 % | 0 % | 169237782 |
61 | NC_010369 | GCTAC | 2 | 10 | 164196 | 164205 | 20 % | 20 % | 20 % | 40 % | 169237783 |
62 | NC_010369 | AGTGG | 2 | 10 | 164950 | 164959 | 20 % | 20 % | 60 % | 0 % | 169237783 |
63 | NC_010369 | CCGGA | 2 | 10 | 169274 | 169283 | 20 % | 0 % | 40 % | 40 % | 169237787 |
64 | NC_010369 | CGGAT | 2 | 10 | 172547 | 172556 | 20 % | 20 % | 40 % | 20 % | 169237788 |
65 | NC_010369 | GCTGC | 2 | 10 | 173227 | 173236 | 0 % | 20 % | 40 % | 40 % | 169237789 |
66 | NC_010369 | GTCGT | 2 | 10 | 173475 | 173484 | 0 % | 40 % | 40 % | 20 % | 169237789 |
67 | NC_010369 | GACGT | 2 | 10 | 174093 | 174102 | 20 % | 20 % | 40 % | 20 % | 169237789 |
68 | NC_010369 | TCACC | 2 | 10 | 174355 | 174364 | 20 % | 20 % | 0 % | 60 % | 169237789 |
69 | NC_010369 | CGTCG | 2 | 10 | 174626 | 174635 | 0 % | 20 % | 40 % | 40 % | 169237789 |
70 | NC_010369 | TCGAT | 2 | 10 | 176356 | 176365 | 20 % | 40 % | 20 % | 20 % | 169237791 |
71 | NC_010369 | CGTCG | 2 | 10 | 176735 | 176744 | 0 % | 20 % | 40 % | 40 % | 169237791 |
72 | NC_010369 | CGTCG | 2 | 10 | 176939 | 176948 | 0 % | 20 % | 40 % | 40 % | 169237791 |
73 | NC_010369 | CAGTC | 2 | 10 | 177236 | 177245 | 20 % | 20 % | 20 % | 40 % | 169237791 |
74 | NC_010369 | CACGA | 2 | 10 | 183734 | 183743 | 40 % | 0 % | 20 % | 40 % | 169237795 |
75 | NC_010369 | AGCCG | 2 | 10 | 184215 | 184224 | 20 % | 0 % | 40 % | 40 % | 169237795 |
76 | NC_010369 | TCGTC | 2 | 10 | 184545 | 184554 | 0 % | 40 % | 20 % | 40 % | 169237795 |
77 | NC_010369 | GCGCC | 2 | 10 | 185512 | 185521 | 0 % | 0 % | 40 % | 60 % | 169237796 |
78 | NC_010369 | GACGC | 2 | 10 | 187177 | 187186 | 20 % | 0 % | 40 % | 40 % | 169237797 |
79 | NC_010369 | GTCGA | 2 | 10 | 188512 | 188521 | 20 % | 20 % | 40 % | 20 % | 169237798 |
80 | NC_010369 | GTCGC | 2 | 10 | 189159 | 189168 | 0 % | 20 % | 40 % | 40 % | 169237798 |
81 | NC_010369 | GAACT | 2 | 10 | 191837 | 191846 | 40 % | 20 % | 20 % | 20 % | 169237799 |
82 | NC_010369 | CTGGG | 2 | 10 | 193088 | 193097 | 0 % | 20 % | 60 % | 20 % | 169237800 |