Hexa-nucleotide Repeats of Halobacterium salinarum R1 plasmid PHS3
Total Repeats: 127
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010368 | GGACGA | 2 | 12 | 3405 | 3416 | 33.33 % | 0 % | 50 % | 16.67 % | 169237355 |
2 | NC_010368 | CCTCGA | 2 | 12 | 3780 | 3791 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237355 |
3 | NC_010368 | ACGTCG | 2 | 12 | 4415 | 4426 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237355 |
4 | NC_010368 | CGTCCA | 2 | 12 | 7794 | 7805 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237357 |
5 | NC_010368 | CCGAAC | 2 | 12 | 7846 | 7857 | 33.33 % | 0 % | 16.67 % | 50 % | 169237357 |
6 | NC_010368 | GTTGAC | 2 | 12 | 8821 | 8832 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237358 |
7 | NC_010368 | GAAGTC | 2 | 12 | 9259 | 9270 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237358 |
8 | NC_010368 | ATCAGG | 2 | 12 | 12337 | 12348 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237360 |
9 | NC_010368 | GACTAC | 2 | 12 | 16179 | 16190 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237363 |
10 | NC_010368 | CGTCGA | 2 | 12 | 16766 | 16777 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237364 |
11 | NC_010368 | GCTGTC | 2 | 12 | 18344 | 18355 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
12 | NC_010368 | TGATCG | 2 | 12 | 24651 | 24662 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237371 |
13 | NC_010368 | GTTCGC | 2 | 12 | 31976 | 31987 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237379 |
14 | NC_010368 | CGGTGG | 2 | 12 | 34647 | 34658 | 0 % | 16.67 % | 66.67 % | 16.67 % | 169237380 |
15 | NC_010368 | TTCATC | 2 | 12 | 34672 | 34683 | 16.67 % | 50 % | 0 % | 33.33 % | 169237380 |
16 | NC_010368 | TGATCG | 2 | 12 | 43669 | 43680 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237391 |
17 | NC_010368 | ACCAGC | 2 | 12 | 46316 | 46327 | 33.33 % | 0 % | 16.67 % | 50 % | 169237397 |
18 | NC_010368 | GATCGG | 2 | 12 | 46537 | 46548 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237397 |
19 | NC_010368 | AGTTCG | 2 | 12 | 48167 | 48178 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237400 |
20 | NC_010368 | CGATCT | 2 | 12 | 49247 | 49258 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 169237400 |
21 | NC_010368 | GAAGCG | 2 | 12 | 49934 | 49945 | 33.33 % | 0 % | 50 % | 16.67 % | 169237401 |
22 | NC_010368 | GAGTCG | 2 | 12 | 52405 | 52416 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237405 |
23 | NC_010368 | CGCTCG | 2 | 12 | 54273 | 54284 | 0 % | 16.67 % | 33.33 % | 50 % | 169237408 |
24 | NC_010368 | CGCTCG | 2 | 12 | 56657 | 56668 | 0 % | 16.67 % | 33.33 % | 50 % | 169237409 |
25 | NC_010368 | TTCTAC | 2 | 12 | 59815 | 59826 | 16.67 % | 50 % | 0 % | 33.33 % | 169237412 |
26 | NC_010368 | GTCGGG | 2 | 12 | 60052 | 60063 | 0 % | 16.67 % | 66.67 % | 16.67 % | 169237412 |
27 | NC_010368 | GCCGAC | 2 | 12 | 61280 | 61291 | 16.67 % | 0 % | 33.33 % | 50 % | 169237413 |
28 | NC_010368 | AACCGG | 2 | 12 | 62720 | 62731 | 33.33 % | 0 % | 33.33 % | 33.33 % | 169237413 |
29 | NC_010368 | CGACGG | 2 | 12 | 64136 | 64147 | 16.67 % | 0 % | 50 % | 33.33 % | 169237415 |
30 | NC_010368 | TCACCG | 2 | 12 | 65978 | 65989 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237416 |
31 | NC_010368 | TCGTGG | 2 | 12 | 66381 | 66392 | 0 % | 33.33 % | 50 % | 16.67 % | 169237416 |
32 | NC_010368 | CAGCCT | 2 | 12 | 68580 | 68591 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237419 |
33 | NC_010368 | CCCAAC | 2 | 12 | 69158 | 69169 | 33.33 % | 0 % | 0 % | 66.67 % | 169237420 |
34 | NC_010368 | CCGAGA | 2 | 12 | 77127 | 77138 | 33.33 % | 0 % | 33.33 % | 33.33 % | 169237433 |
35 | NC_010368 | TCACCG | 2 | 12 | 78974 | 78985 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237436 |
36 | NC_010368 | ACGAGG | 2 | 12 | 81158 | 81169 | 33.33 % | 0 % | 50 % | 16.67 % | 169237440 |
37 | NC_010368 | TCCAGG | 2 | 12 | 82195 | 82206 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237441 |
38 | NC_010368 | GTCGTT | 2 | 12 | 82296 | 82307 | 0 % | 50 % | 33.33 % | 16.67 % | 169237441 |
39 | NC_010368 | TGTCGT | 2 | 12 | 87502 | 87513 | 0 % | 50 % | 33.33 % | 16.67 % | 169237446 |
40 | NC_010368 | GCGTCG | 2 | 12 | 88011 | 88022 | 0 % | 16.67 % | 50 % | 33.33 % | 169237446 |
41 | NC_010368 | GCCGTG | 2 | 12 | 88058 | 88069 | 0 % | 16.67 % | 50 % | 33.33 % | 169237446 |
42 | NC_010368 | CCGACT | 2 | 12 | 89065 | 89076 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237447 |
43 | NC_010368 | GACCGC | 2 | 12 | 91839 | 91850 | 16.67 % | 0 % | 33.33 % | 50 % | 169237449 |
44 | NC_010368 | CGATGA | 2 | 12 | 95903 | 95914 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237452 |
45 | NC_010368 | CGCGCT | 2 | 12 | 99183 | 99194 | 0 % | 16.67 % | 33.33 % | 50 % | 169237456 |
46 | NC_010368 | GCCGTA | 2 | 12 | 101401 | 101412 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237458 |
47 | NC_010368 | CTCGAT | 2 | 12 | 102390 | 102401 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
48 | NC_010368 | GGACAA | 2 | 12 | 104055 | 104066 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
49 | NC_010368 | GAACGG | 2 | 12 | 104807 | 104818 | 33.33 % | 0 % | 50 % | 16.67 % | 169237464 |
50 | NC_010368 | CGCGTT | 2 | 12 | 107565 | 107576 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237467 |
51 | NC_010368 | AACAGC | 2 | 12 | 108285 | 108296 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |
52 | NC_010368 | ACGTCG | 2 | 12 | 108887 | 108898 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237468 |
53 | NC_010368 | TGTCGC | 2 | 12 | 109116 | 109127 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237468 |
54 | NC_010368 | CGACGC | 2 | 12 | 109135 | 109146 | 16.67 % | 0 % | 33.33 % | 50 % | 169237468 |
55 | NC_010368 | CGAGGT | 2 | 12 | 110373 | 110384 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237468 |
56 | NC_010368 | GCTGGC | 2 | 12 | 113932 | 113943 | 0 % | 16.67 % | 50 % | 33.33 % | 169237471 |
57 | NC_010368 | ACGTCA | 2 | 12 | 114468 | 114479 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237471 |
58 | NC_010368 | GGTCGC | 2 | 12 | 114583 | 114594 | 0 % | 16.67 % | 50 % | 33.33 % | 169237471 |
59 | NC_010368 | GCTCGG | 2 | 12 | 117830 | 117841 | 0 % | 16.67 % | 50 % | 33.33 % | 169237474 |
60 | NC_010368 | CGCGGT | 2 | 12 | 117857 | 117868 | 0 % | 16.67 % | 50 % | 33.33 % | 169237474 |
61 | NC_010368 | TCGCCA | 2 | 12 | 119333 | 119344 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237475 |
62 | NC_010368 | CGTCGC | 2 | 12 | 120700 | 120711 | 0 % | 16.67 % | 33.33 % | 50 % | 169237477 |
63 | NC_010368 | GAGCGT | 2 | 12 | 121414 | 121425 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237478 |
64 | NC_010368 | CGCGGC | 2 | 12 | 124414 | 124425 | 0 % | 0 % | 50 % | 50 % | 169237481 |
65 | NC_010368 | ACGCGA | 2 | 12 | 125740 | 125751 | 33.33 % | 0 % | 33.33 % | 33.33 % | 169237481 |
66 | NC_010368 | CGGCCT | 2 | 12 | 126112 | 126123 | 0 % | 16.67 % | 33.33 % | 50 % | 169237481 |
67 | NC_010368 | GCCGTC | 2 | 12 | 129593 | 129604 | 0 % | 16.67 % | 33.33 % | 50 % | 169237484 |
68 | NC_010368 | GGAGTG | 2 | 12 | 131292 | 131303 | 16.67 % | 16.67 % | 66.67 % | 0 % | 169237485 |
69 | NC_010368 | TGCCGT | 2 | 12 | 131462 | 131473 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237485 |
70 | NC_010368 | GCTGTC | 2 | 12 | 140992 | 141003 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
71 | NC_010368 | GCTTCA | 2 | 12 | 143231 | 143242 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
72 | NC_010368 | ACTGTT | 2 | 12 | 143277 | 143288 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
73 | NC_010368 | CAGATG | 2 | 12 | 149351 | 149362 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237499 |
74 | NC_010368 | GTCACG | 2 | 12 | 157415 | 157426 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237503 |
75 | NC_010368 | ACGATC | 2 | 12 | 157541 | 157552 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237503 |
76 | NC_010368 | CTCGGT | 2 | 12 | 157893 | 157904 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237504 |
77 | NC_010368 | CGGCGA | 2 | 12 | 159691 | 159702 | 16.67 % | 0 % | 50 % | 33.33 % | 169237504 |
78 | NC_010368 | GATCGG | 2 | 12 | 159944 | 159955 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237504 |
79 | NC_010368 | GAACTC | 2 | 12 | 164615 | 164626 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237508 |
80 | NC_010368 | AGTAGA | 2 | 12 | 172402 | 172413 | 50 % | 16.67 % | 33.33 % | 0 % | 169237515 |
81 | NC_010368 | ACGGAG | 2 | 12 | 173744 | 173755 | 33.33 % | 0 % | 50 % | 16.67 % | 169237517 |
82 | NC_010368 | CGGAAT | 2 | 12 | 176950 | 176961 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237520 |
83 | NC_010368 | GCCTTT | 2 | 12 | 177803 | 177814 | 0 % | 50 % | 16.67 % | 33.33 % | 169237521 |
84 | NC_010368 | CGAAGT | 2 | 12 | 177912 | 177923 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237521 |
85 | NC_010368 | GACGTG | 2 | 12 | 180449 | 180460 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237522 |
86 | NC_010368 | TCGAAT | 2 | 12 | 186534 | 186545 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 169237530 |
87 | NC_010368 | CGGCGC | 2 | 12 | 189111 | 189122 | 0 % | 0 % | 50 % | 50 % | 169237532 |
88 | NC_010368 | GGATCG | 2 | 12 | 189513 | 189524 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237532 |
89 | NC_010368 | CGCCGA | 2 | 12 | 192234 | 192245 | 16.67 % | 0 % | 33.33 % | 50 % | 169237534 |
90 | NC_010368 | TCGATA | 2 | 12 | 194492 | 194503 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 169237537 |
91 | NC_010368 | GAGTTC | 2 | 12 | 194677 | 194688 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237537 |
92 | NC_010368 | GGATCG | 2 | 12 | 199319 | 199330 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237540 |
93 | NC_010368 | CGTTCA | 2 | 12 | 200919 | 200930 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
94 | NC_010368 | GCCTCG | 2 | 12 | 205621 | 205632 | 0 % | 16.67 % | 33.33 % | 50 % | 169237545 |
95 | NC_010368 | CATCGT | 2 | 12 | 206873 | 206884 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 169237545 |
96 | NC_010368 | GTAGCG | 2 | 12 | 211405 | 211416 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
97 | NC_010368 | TCGACT | 2 | 12 | 213042 | 213053 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
98 | NC_010368 | GTCAAC | 2 | 12 | 213482 | 213493 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
99 | NC_010368 | GAGCTT | 2 | 12 | 215896 | 215907 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
100 | NC_010368 | CTGGAG | 2 | 12 | 217681 | 217692 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237549 |
101 | NC_010368 | TTGTAG | 2 | 12 | 222924 | 222935 | 16.67 % | 50 % | 33.33 % | 0 % | 169237551 |
102 | NC_010368 | TGACGA | 2 | 12 | 225055 | 225066 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
103 | NC_010368 | GCTGTC | 2 | 12 | 225932 | 225943 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
104 | NC_010368 | TCTGCT | 2 | 12 | 230237 | 230248 | 0 % | 50 % | 16.67 % | 33.33 % | 169237554 |
105 | NC_010368 | CGTCTC | 2 | 12 | 232232 | 232243 | 0 % | 33.33 % | 16.67 % | 50 % | 169237555 |
106 | NC_010368 | GTCGCC | 2 | 12 | 237654 | 237665 | 0 % | 16.67 % | 33.33 % | 50 % | 169237557 |
107 | NC_010368 | GACAGC | 2 | 12 | 241754 | 241765 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
108 | NC_010368 | GACATC | 2 | 12 | 244760 | 244771 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237561 |
109 | NC_010368 | CATACC | 2 | 12 | 252083 | 252094 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
110 | NC_010368 | GACGGC | 2 | 12 | 253660 | 253671 | 16.67 % | 0 % | 50 % | 33.33 % | 169237571 |
111 | NC_010368 | AACATC | 2 | 12 | 253963 | 253974 | 50 % | 16.67 % | 0 % | 33.33 % | 169237571 |
112 | NC_010368 | GATTCG | 2 | 12 | 254758 | 254769 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237572 |
113 | NC_010368 | CTACGT | 2 | 12 | 255983 | 255994 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
114 | NC_010368 | CTGCCT | 2 | 12 | 256095 | 256106 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
115 | NC_010368 | GTAGCG | 2 | 12 | 256170 | 256181 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237573 |
116 | NC_010368 | TCGACT | 2 | 12 | 256677 | 256688 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 169237573 |
117 | NC_010368 | GTCAAC | 2 | 12 | 257117 | 257128 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237573 |
118 | NC_010368 | GTCGAA | 2 | 12 | 259212 | 259223 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237574 |
119 | NC_010368 | TCGCCG | 2 | 12 | 261651 | 261662 | 0 % | 16.67 % | 33.33 % | 50 % | 169237576 |
120 | NC_010368 | GTTCGA | 2 | 12 | 262073 | 262084 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237578 |
121 | NC_010368 | TTCGAC | 2 | 12 | 262281 | 262292 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 169237578 |
122 | NC_010368 | TAGCGA | 2 | 12 | 267700 | 267711 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
123 | NC_010368 | GCGTCG | 2 | 12 | 272227 | 272238 | 0 % | 16.67 % | 50 % | 33.33 % | 169237590 |
124 | NC_010368 | TCGTAC | 2 | 12 | 272921 | 272932 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
125 | NC_010368 | GACAGC | 2 | 12 | 274378 | 274389 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
126 | NC_010368 | CACAGA | 2 | 12 | 276397 | 276408 | 50 % | 0 % | 16.67 % | 33.33 % | 169237594 |
127 | NC_010368 | GCGTCT | 2 | 12 | 280121 | 280132 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237598 |