Hexa-nucleotide Coding Repeats of Halobacterium salinarum R1 plasmid PHS1
Total Repeats: 55
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010366 | GTCACG | 2 | 12 | 733 | 744 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237161 |
2 | NC_010366 | GAATTA | 2 | 12 | 8352 | 8363 | 50 % | 33.33 % | 16.67 % | 0 % | 169237168 |
3 | NC_010366 | ATTACC | 2 | 12 | 9471 | 9482 | 33.33 % | 33.33 % | 0 % | 33.33 % | 169237169 |
4 | NC_010366 | GAAGTC | 2 | 12 | 15040 | 15051 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237171 |
5 | NC_010366 | CGACGT | 2 | 12 | 18828 | 18839 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237178 |
6 | NC_010366 | GAGATC | 2 | 12 | 26099 | 26110 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237186 |
7 | NC_010366 | CGACTA | 2 | 12 | 27158 | 27169 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237188 |
8 | NC_010366 | ATCCCC | 2 | 12 | 29313 | 29324 | 16.67 % | 16.67 % | 0 % | 66.67 % | 169237189 |
9 | NC_010366 | AGTCGT | 2 | 12 | 30410 | 30421 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237189 |
10 | NC_010366 | ACCATC | 2 | 12 | 31456 | 31467 | 33.33 % | 16.67 % | 0 % | 50 % | 169237191 |
11 | NC_010366 | TTCGAC | 2 | 12 | 32544 | 32555 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 169237192 |
12 | NC_010366 | TGAGCG | 2 | 12 | 37293 | 37304 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237195 |
13 | NC_010366 | AAATCC | 2 | 12 | 38466 | 38477 | 50 % | 16.67 % | 0 % | 33.33 % | 169237195 |
14 | NC_010366 | TCGGCC | 2 | 12 | 45680 | 45691 | 0 % | 16.67 % | 33.33 % | 50 % | 169237206 |
15 | NC_010366 | GTCGAA | 2 | 12 | 47094 | 47105 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237208 |
16 | NC_010366 | TCCACT | 2 | 12 | 47944 | 47955 | 16.67 % | 33.33 % | 0 % | 50 % | 169237209 |
17 | NC_010366 | TTCGGG | 2 | 12 | 48478 | 48489 | 0 % | 33.33 % | 50 % | 16.67 % | 169237210 |
18 | NC_010366 | CAGCCA | 2 | 12 | 48837 | 48848 | 33.33 % | 0 % | 16.67 % | 50 % | 169237210 |
19 | NC_010366 | CGCGGG | 2 | 12 | 52924 | 52935 | 0 % | 0 % | 66.67 % | 33.33 % | 169237214 |
20 | NC_010366 | TGCGCC | 2 | 12 | 53266 | 53277 | 0 % | 16.67 % | 33.33 % | 50 % | 169237214 |
21 | NC_010366 | CGGGTT | 2 | 12 | 53706 | 53717 | 0 % | 33.33 % | 50 % | 16.67 % | 169237216 |
22 | NC_010366 | TCGGCG | 2 | 12 | 54203 | 54214 | 0 % | 16.67 % | 50 % | 33.33 % | 169237216 |
23 | NC_010366 | GCCATC | 2 | 12 | 54265 | 54276 | 16.67 % | 16.67 % | 16.67 % | 50 % | 169237216 |
24 | NC_010366 | CGTCGC | 2 | 12 | 54477 | 54488 | 0 % | 16.67 % | 33.33 % | 50 % | 169237216 |
25 | NC_010366 | TCGACG | 2 | 12 | 55552 | 55563 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237218 |
26 | NC_010366 | TCGCGT | 2 | 12 | 57329 | 57340 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237220 |
27 | NC_010366 | GCGTCG | 2 | 12 | 60313 | 60324 | 0 % | 16.67 % | 50 % | 33.33 % | 169237224 |
28 | NC_010366 | GAACTC | 2 | 12 | 63279 | 63290 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237227 |
29 | NC_010366 | GACGTC | 2 | 12 | 65061 | 65072 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237229 |
30 | NC_010366 | TCTGAT | 2 | 12 | 79722 | 79733 | 16.67 % | 50 % | 16.67 % | 16.67 % | 169237240 |
31 | NC_010366 | TTCGCG | 2 | 12 | 80925 | 80936 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237241 |
32 | NC_010366 | ACACGT | 2 | 12 | 81360 | 81371 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 169237242 |
33 | NC_010366 | GTCGTG | 2 | 12 | 81550 | 81561 | 0 % | 33.33 % | 50 % | 16.67 % | 169237242 |
34 | NC_010366 | CTGCGT | 2 | 12 | 81859 | 81870 | 0 % | 33.33 % | 33.33 % | 33.33 % | 169237243 |
35 | NC_010366 | GAGCGC | 2 | 12 | 88107 | 88118 | 16.67 % | 0 % | 50 % | 33.33 % | 169237253 |
36 | NC_010366 | GGCGCG | 2 | 12 | 94212 | 94223 | 0 % | 0 % | 66.67 % | 33.33 % | 169237261 |
37 | NC_010366 | GTCGAT | 2 | 12 | 96063 | 96074 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237263 |
38 | NC_010366 | CGTAGT | 2 | 12 | 102911 | 102922 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237271 |
39 | NC_010366 | GTTGAC | 2 | 12 | 105048 | 105059 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237275 |
40 | NC_010366 | GAAGTC | 2 | 12 | 105486 | 105497 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237275 |
41 | NC_010366 | TCGCAT | 2 | 12 | 107494 | 107505 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 169237278 |
42 | NC_010366 | CCGTGA | 2 | 12 | 107542 | 107553 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 169237278 |
43 | NC_010366 | GATATC | 2 | 12 | 116749 | 116760 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 169237285 |
44 | NC_010366 | TCGAAG | 2 | 12 | 117083 | 117094 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237286 |
45 | NC_010366 | GGACGA | 2 | 12 | 117975 | 117986 | 33.33 % | 0 % | 50 % | 16.67 % | 169237286 |
46 | NC_010366 | AAGAGA | 2 | 12 | 119192 | 119203 | 66.67 % | 0 % | 33.33 % | 0 % | 169237286 |
47 | NC_010366 | CGAGAA | 2 | 12 | 122612 | 122623 | 50 % | 0 % | 33.33 % | 16.67 % | 169237287 |
48 | NC_010366 | GCGTGA | 2 | 12 | 123854 | 123865 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237287 |
49 | NC_010366 | CATTCC | 2 | 12 | 125616 | 125627 | 16.67 % | 33.33 % | 0 % | 50 % | 169237289 |
50 | NC_010366 | GTTGAC | 2 | 12 | 134950 | 134961 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237295 |
51 | NC_010366 | GAAGTC | 2 | 12 | 135388 | 135399 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 169237295 |
52 | NC_010366 | CCAGAC | 2 | 12 | 138847 | 138858 | 33.33 % | 0 % | 16.67 % | 50 % | 169237299 |
53 | NC_010366 | GTTCAG | 2 | 12 | 141947 | 141958 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 169237306 |
54 | NC_010366 | GGGGGT | 2 | 12 | 144525 | 144536 | 0 % | 16.67 % | 83.33 % | 0 % | 169237309 |
55 | NC_010366 | TGACGG | 2 | 12 | 146263 | 146274 | 16.67 % | 16.67 % | 50 % | 16.67 % | 169237311 |