Hexa-nucleotide Non-Coding Repeats of Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome
Total Repeats: 131
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010278 | TTTAAT | 2 | 12 | 59668 | 59679 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
2 | NC_010278 | AGATAA | 2 | 12 | 62725 | 62736 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
3 | NC_010278 | CGAAGG | 2 | 12 | 68647 | 68658 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
4 | NC_010278 | TGAAAT | 2 | 12 | 72032 | 72043 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
5 | NC_010278 | GCGAAA | 2 | 12 | 73207 | 73218 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
6 | NC_010278 | CCTTAT | 2 | 12 | 73314 | 73325 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
7 | NC_010278 | TGTTTT | 2 | 12 | 93392 | 93403 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
8 | NC_010278 | AGTAAA | 2 | 12 | 109095 | 109106 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
9 | NC_010278 | CTATTG | 2 | 12 | 109729 | 109740 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
10 | NC_010278 | ATACTA | 2 | 12 | 109909 | 109920 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
11 | NC_010278 | CTGCTA | 2 | 12 | 110239 | 110250 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
12 | NC_010278 | CGATTG | 2 | 12 | 110785 | 110796 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
13 | NC_010278 | GTTAGC | 2 | 12 | 111462 | 111473 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
14 | NC_010278 | AAAGTG | 2 | 12 | 113146 | 113157 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
15 | NC_010278 | TGTAAA | 2 | 12 | 113954 | 113965 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
16 | NC_010278 | CAAATG | 3 | 18 | 114275 | 114292 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
17 | NC_010278 | TGCGAT | 2 | 12 | 114468 | 114479 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
18 | NC_010278 | GTGAAT | 2 | 12 | 115828 | 115839 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
19 | NC_010278 | ATACGG | 2 | 12 | 116327 | 116338 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
20 | NC_010278 | GACGGT | 2 | 12 | 119086 | 119097 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
21 | NC_010278 | AAAACC | 2 | 12 | 119251 | 119262 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
22 | NC_010278 | TTGCCG | 2 | 12 | 126459 | 126470 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
23 | NC_010278 | GCGATT | 2 | 12 | 169228 | 169239 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
24 | NC_010278 | TAATTT | 2 | 12 | 175241 | 175252 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
25 | NC_010278 | TTATTT | 2 | 12 | 184597 | 184608 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
26 | NC_010278 | ATCGTG | 2 | 12 | 201237 | 201248 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
27 | NC_010278 | TTATTT | 2 | 12 | 210062 | 210073 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
28 | NC_010278 | AGCTGA | 2 | 12 | 210144 | 210155 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
29 | NC_010278 | TTTTTA | 2 | 12 | 243426 | 243437 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
30 | NC_010278 | TTAAGT | 2 | 12 | 268109 | 268120 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
31 | NC_010278 | CTTTTA | 2 | 12 | 276038 | 276049 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
32 | NC_010278 | CGAAGG | 2 | 12 | 282344 | 282355 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
33 | NC_010278 | TGAAAT | 2 | 12 | 285678 | 285689 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
34 | NC_010278 | CATTTT | 2 | 12 | 313031 | 313042 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
35 | NC_010278 | ATTTTC | 2 | 12 | 337339 | 337350 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
36 | NC_010278 | AAAGTT | 2 | 12 | 350896 | 350907 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
37 | NC_010278 | TAAAAA | 2 | 12 | 387969 | 387980 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
38 | NC_010278 | TATTTA | 2 | 12 | 395408 | 395419 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
39 | NC_010278 | ATTAAA | 2 | 12 | 432867 | 432878 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
40 | NC_010278 | TTTTCG | 2 | 12 | 434742 | 434753 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
41 | NC_010278 | GAATGC | 2 | 12 | 449213 | 449224 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
42 | NC_010278 | ATCCGA | 2 | 12 | 467996 | 468007 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
43 | NC_010278 | AATAAA | 2 | 12 | 482558 | 482569 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
44 | NC_010278 | TATTTA | 2 | 12 | 492099 | 492110 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
45 | NC_010278 | ATAAAT | 2 | 12 | 503599 | 503610 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
46 | NC_010278 | ATTAAA | 2 | 12 | 506852 | 506863 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
47 | NC_010278 | TGATGG | 2 | 12 | 507285 | 507296 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
48 | NC_010278 | TAATCC | 2 | 12 | 507735 | 507746 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
49 | NC_010278 | ATACTA | 2 | 12 | 508364 | 508375 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
50 | NC_010278 | TGTAAA | 2 | 12 | 510624 | 510635 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
51 | NC_010278 | ATACGG | 2 | 12 | 512093 | 512104 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
52 | NC_010278 | GATAAA | 2 | 12 | 562188 | 562199 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
53 | NC_010278 | GGTGCG | 2 | 12 | 562822 | 562833 | 0 % | 16.67 % | 66.67 % | 16.67 % | Non-Coding |
54 | NC_010278 | CGTTTT | 2 | 12 | 566253 | 566264 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
55 | NC_010278 | ATTAGC | 2 | 12 | 567751 | 567762 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
56 | NC_010278 | GATTGA | 2 | 12 | 573736 | 573747 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
57 | NC_010278 | AATATC | 2 | 12 | 598227 | 598238 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
58 | NC_010278 | ACATTT | 2 | 12 | 598907 | 598918 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
59 | NC_010278 | TTTTGT | 2 | 12 | 641862 | 641873 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
60 | NC_010278 | AATAGA | 2 | 12 | 670975 | 670986 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
61 | NC_010278 | TAATCG | 2 | 12 | 694952 | 694963 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
62 | NC_010278 | CGCCAT | 2 | 12 | 695105 | 695116 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
63 | NC_010278 | TTTATA | 2 | 12 | 695360 | 695371 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
64 | NC_010278 | TTATTT | 2 | 12 | 737583 | 737594 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
65 | NC_010278 | TAATGA | 2 | 12 | 743876 | 743887 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
66 | NC_010278 | AATATA | 2 | 12 | 751310 | 751321 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
67 | NC_010278 | TTCTTT | 2 | 12 | 771235 | 771246 | 0 % | 83.33 % | 0 % | 16.67 % | Non-Coding |
68 | NC_010278 | TTTTTA | 2 | 12 | 886346 | 886357 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
69 | NC_010278 | TCCCCT | 2 | 12 | 900986 | 900997 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
70 | NC_010278 | CAAAGG | 2 | 12 | 950359 | 950370 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
71 | NC_010278 | TTATAT | 2 | 12 | 957120 | 957131 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
72 | NC_010278 | TCTGAT | 2 | 12 | 998658 | 998669 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
73 | NC_010278 | AAAACT | 2 | 12 | 1030729 | 1030740 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
74 | NC_010278 | TAAATA | 2 | 12 | 1053456 | 1053467 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
75 | NC_010278 | ATCTAA | 2 | 12 | 1124404 | 1124415 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
76 | NC_010278 | TATCTT | 2 | 12 | 1125534 | 1125545 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
77 | NC_010278 | CAAAAT | 2 | 12 | 1125795 | 1125806 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
78 | NC_010278 | TCTTAA | 2 | 12 | 1153355 | 1153366 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
79 | NC_010278 | TAAAAA | 2 | 12 | 1221648 | 1221659 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
80 | NC_010278 | TTTCTA | 2 | 12 | 1239310 | 1239321 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
81 | NC_010278 | AAAGAA | 2 | 12 | 1243208 | 1243219 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
82 | NC_010278 | AAATAT | 2 | 12 | 1244661 | 1244672 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
83 | NC_010278 | CCAGCT | 2 | 12 | 1246411 | 1246422 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
84 | NC_010278 | CTAAAG | 2 | 12 | 1248201 | 1248212 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
85 | NC_010278 | TAAATT | 2 | 12 | 1266122 | 1266133 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
86 | NC_010278 | ATTAAA | 2 | 12 | 1280293 | 1280304 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
87 | NC_010278 | TGAGAA | 2 | 12 | 1355263 | 1355274 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
88 | NC_010278 | GATAAA | 2 | 12 | 1368190 | 1368201 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
89 | NC_010278 | TGAATA | 2 | 12 | 1385297 | 1385308 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
90 | NC_010278 | AAATTT | 2 | 12 | 1444342 | 1444353 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
91 | NC_010278 | AGATTA | 2 | 12 | 1481846 | 1481857 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
92 | NC_010278 | AGAAAA | 2 | 12 | 1527383 | 1527394 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
93 | NC_010278 | TTTCGC | 2 | 12 | 1527528 | 1527539 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
94 | NC_010278 | ATTTCA | 2 | 12 | 1528703 | 1528714 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
95 | NC_010278 | GCCTTC | 2 | 12 | 1532087 | 1532098 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
96 | NC_010278 | AACATA | 2 | 12 | 1547254 | 1547265 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
97 | NC_010278 | ATATCT | 2 | 12 | 1549068 | 1549079 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
98 | NC_010278 | GCTCTT | 2 | 12 | 1565854 | 1565865 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
99 | NC_010278 | AAAAGA | 2 | 12 | 1569866 | 1569877 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
100 | NC_010278 | ATACTC | 2 | 12 | 1571971 | 1571982 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
101 | NC_010278 | CACCCA | 2 | 12 | 1581630 | 1581641 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
102 | NC_010278 | GGACAA | 2 | 12 | 1592706 | 1592717 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
103 | NC_010278 | TAAAGA | 2 | 12 | 1603642 | 1603653 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
104 | NC_010278 | CAAAAA | 2 | 12 | 1688948 | 1688959 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
105 | NC_010278 | ATTTCA | 2 | 12 | 1720105 | 1720116 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
106 | NC_010278 | GCCTTC | 2 | 12 | 1723383 | 1723394 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
107 | NC_010278 | TATTTA | 2 | 12 | 1750324 | 1750335 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
108 | NC_010278 | TTCTTT | 2 | 12 | 1758111 | 1758122 | 0 % | 83.33 % | 0 % | 16.67 % | Non-Coding |
109 | NC_010278 | AAATAA | 2 | 12 | 1762040 | 1762051 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
110 | NC_010278 | TATAAA | 2 | 12 | 1776191 | 1776202 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
111 | NC_010278 | CTTTCT | 2 | 12 | 1783392 | 1783403 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
112 | NC_010278 | TTTCGC | 2 | 12 | 1830547 | 1830558 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
113 | NC_010278 | ATTTCA | 2 | 12 | 1831722 | 1831733 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
114 | NC_010278 | GCCTTC | 2 | 12 | 1835106 | 1835117 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
115 | NC_010278 | TAGATC | 2 | 12 | 1852219 | 1852230 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
116 | NC_010278 | ATCATT | 2 | 12 | 1861549 | 1861560 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
117 | NC_010278 | GCTTTA | 2 | 12 | 1915607 | 1915618 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
118 | NC_010278 | TTGCAA | 2 | 12 | 1972051 | 1972062 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
119 | NC_010278 | CTTTAA | 2 | 12 | 1973032 | 1973043 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
120 | NC_010278 | TAAAGA | 2 | 12 | 1999251 | 1999262 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
121 | NC_010278 | CGAAGG | 2 | 12 | 2027817 | 2027828 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
122 | NC_010278 | TGAAAT | 2 | 12 | 2031202 | 2031213 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
123 | NC_010278 | GCGAAA | 2 | 12 | 2032377 | 2032388 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
124 | NC_010278 | GTTTTT | 2 | 12 | 2032427 | 2032438 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
125 | NC_010278 | GTAAAG | 2 | 12 | 2033006 | 2033017 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
126 | NC_010278 | ATGAAA | 2 | 12 | 2106655 | 2106666 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
127 | NC_010278 | GTTTTT | 2 | 12 | 2158718 | 2158729 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
128 | NC_010278 | GACTGT | 2 | 12 | 2176620 | 2176631 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
129 | NC_010278 | AAAAAG | 2 | 12 | 2185317 | 2185328 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
130 | NC_010278 | TAATAT | 2 | 12 | 2197143 | 2197154 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
131 | NC_010278 | ATCATA | 2 | 12 | 2211548 | 2211559 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |