Penta-nucleotide Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI05
Total Repeats: 72
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009959 | CGCGG | 2 | 10 | 342 | 351 | 0 % | 0 % | 60 % | 40 % | 159046677 |
2 | NC_009959 | GTCGT | 2 | 10 | 1775 | 1784 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
3 | NC_009959 | GCCAT | 2 | 10 | 2837 | 2846 | 20 % | 20 % | 20 % | 40 % | 159046679 |
4 | NC_009959 | GCCGG | 2 | 10 | 2917 | 2926 | 0 % | 0 % | 60 % | 40 % | 159046679 |
5 | NC_009959 | CGGGG | 2 | 10 | 3056 | 3065 | 0 % | 0 % | 80 % | 20 % | 159046679 |
6 | NC_009959 | CGCGG | 2 | 10 | 3399 | 3408 | 0 % | 0 % | 60 % | 40 % | 159046679 |
7 | NC_009959 | CTCGA | 2 | 10 | 3836 | 3845 | 20 % | 20 % | 20 % | 40 % | 159046680 |
8 | NC_009959 | GATCT | 2 | 10 | 5018 | 5027 | 20 % | 40 % | 20 % | 20 % | 159046680 |
9 | NC_009959 | CCGGA | 2 | 10 | 6417 | 6426 | 20 % | 0 % | 40 % | 40 % | 251833004 |
10 | NC_009959 | CGGGG | 2 | 10 | 9039 | 9048 | 0 % | 0 % | 80 % | 20 % | 159046684 |
11 | NC_009959 | TCCAG | 2 | 10 | 10168 | 10177 | 20 % | 20 % | 20 % | 40 % | 159046685 |
12 | NC_009959 | CCGGC | 2 | 10 | 11049 | 11058 | 0 % | 0 % | 40 % | 60 % | 159046686 |
13 | NC_009959 | GCCCC | 2 | 10 | 11298 | 11307 | 0 % | 0 % | 20 % | 80 % | 159046686 |
14 | NC_009959 | AGGGC | 2 | 10 | 11796 | 11805 | 20 % | 0 % | 60 % | 20 % | 159046686 |
15 | NC_009959 | GCCCG | 2 | 10 | 12303 | 12312 | 0 % | 0 % | 40 % | 60 % | 159046686 |
16 | NC_009959 | GCCGC | 2 | 10 | 13296 | 13305 | 0 % | 0 % | 40 % | 60 % | 159046688 |
17 | NC_009959 | GTGCC | 2 | 10 | 13869 | 13878 | 0 % | 20 % | 40 % | 40 % | 159046688 |
18 | NC_009959 | CGCGG | 2 | 10 | 14258 | 14267 | 0 % | 0 % | 60 % | 40 % | 159046689 |
19 | NC_009959 | CGGCC | 2 | 10 | 14701 | 14710 | 0 % | 0 % | 40 % | 60 % | 159046689 |
20 | NC_009959 | GCGCC | 2 | 10 | 15884 | 15893 | 0 % | 0 % | 40 % | 60 % | 159046690 |
21 | NC_009959 | CCAGG | 2 | 10 | 16844 | 16853 | 20 % | 0 % | 40 % | 40 % | 159046691 |
22 | NC_009959 | CGAGG | 2 | 10 | 17138 | 17147 | 20 % | 0 % | 60 % | 20 % | 159046691 |
23 | NC_009959 | CGGCC | 2 | 10 | 17396 | 17405 | 0 % | 0 % | 40 % | 60 % | 159046691 |
24 | NC_009959 | GCGCC | 2 | 10 | 17416 | 17425 | 0 % | 0 % | 40 % | 60 % | 159046691 |
25 | NC_009959 | CCCGG | 2 | 10 | 17675 | 17684 | 0 % | 0 % | 40 % | 60 % | 159046692 |
26 | NC_009959 | GGCCC | 2 | 10 | 18336 | 18345 | 0 % | 0 % | 40 % | 60 % | 159046693 |
27 | NC_009959 | GGACC | 2 | 10 | 18916 | 18925 | 20 % | 0 % | 40 % | 40 % | 159046693 |
28 | NC_009959 | CCGGG | 2 | 10 | 19684 | 19693 | 0 % | 0 % | 60 % | 40 % | 159046693 |
29 | NC_009959 | CGGGC | 2 | 10 | 20048 | 20057 | 0 % | 0 % | 60 % | 40 % | 159046694 |
30 | NC_009959 | CCGCG | 2 | 10 | 20563 | 20572 | 0 % | 0 % | 40 % | 60 % | 159046694 |
31 | NC_009959 | CGCGG | 2 | 10 | 20884 | 20893 | 0 % | 0 % | 60 % | 40 % | 159046694 |
32 | NC_009959 | TGCCC | 2 | 10 | 21189 | 21198 | 0 % | 20 % | 20 % | 60 % | 159046694 |
33 | NC_009959 | GCACC | 2 | 10 | 21574 | 21583 | 20 % | 0 % | 20 % | 60 % | 159046695 |
34 | NC_009959 | CGACC | 2 | 10 | 22805 | 22814 | 20 % | 0 % | 20 % | 60 % | 159046696 |
35 | NC_009959 | GCGCC | 2 | 10 | 23855 | 23864 | 0 % | 0 % | 40 % | 60 % | 159046697 |
36 | NC_009959 | GCGAC | 2 | 10 | 25398 | 25407 | 20 % | 0 % | 40 % | 40 % | 159046699 |
37 | NC_009959 | TGTGC | 2 | 10 | 25444 | 25453 | 0 % | 40 % | 40 % | 20 % | 159046699 |
38 | NC_009959 | CGGGC | 2 | 10 | 25634 | 25643 | 0 % | 0 % | 60 % | 40 % | 159046699 |
39 | NC_009959 | CTGGT | 2 | 10 | 27346 | 27355 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
40 | NC_009959 | GGCAA | 2 | 10 | 29159 | 29168 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
41 | NC_009959 | CATAA | 2 | 10 | 29493 | 29502 | 60 % | 20 % | 0 % | 20 % | 159046704 |
42 | NC_009959 | CCCGG | 2 | 10 | 29558 | 29567 | 0 % | 0 % | 40 % | 60 % | 159046705 |
43 | NC_009959 | CCCGG | 2 | 10 | 31358 | 31367 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
44 | NC_009959 | GGGCA | 2 | 10 | 31421 | 31430 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
45 | NC_009959 | CCGGG | 2 | 10 | 32983 | 32992 | 0 % | 0 % | 60 % | 40 % | 159046709 |
46 | NC_009959 | CCGGG | 2 | 10 | 33501 | 33510 | 0 % | 0 % | 60 % | 40 % | 159046710 |
47 | NC_009959 | TGGTT | 2 | 10 | 34244 | 34253 | 0 % | 60 % | 40 % | 0 % | 159046711 |
48 | NC_009959 | CCGCG | 2 | 10 | 35617 | 35626 | 0 % | 0 % | 40 % | 60 % | 159046712 |
49 | NC_009959 | CGCCC | 2 | 10 | 35897 | 35906 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
50 | NC_009959 | GTCGT | 2 | 10 | 36922 | 36931 | 0 % | 40 % | 40 % | 20 % | 159046713 |
51 | NC_009959 | ACGCG | 2 | 10 | 38061 | 38070 | 20 % | 0 % | 40 % | 40 % | 159046714 |
52 | NC_009959 | CTCGG | 2 | 10 | 39839 | 39848 | 0 % | 20 % | 40 % | 40 % | 159046716 |
53 | NC_009959 | CCTGA | 2 | 10 | 40238 | 40247 | 20 % | 20 % | 20 % | 40 % | 159046716 |
54 | NC_009959 | GCGCC | 2 | 10 | 41199 | 41208 | 0 % | 0 % | 40 % | 60 % | 159046717 |
55 | NC_009959 | TCCGC | 2 | 10 | 41232 | 41241 | 0 % | 20 % | 20 % | 60 % | 159046717 |
56 | NC_009959 | GACCC | 2 | 10 | 45855 | 45864 | 20 % | 0 % | 20 % | 60 % | 159046721 |
57 | NC_009959 | GCGCC | 2 | 10 | 46201 | 46210 | 0 % | 0 % | 40 % | 60 % | 159046722 |
58 | NC_009959 | ACCGC | 2 | 10 | 46489 | 46498 | 20 % | 0 % | 20 % | 60 % | 159046722 |
59 | NC_009959 | TACCC | 2 | 10 | 49923 | 49932 | 20 % | 20 % | 0 % | 60 % | 159046725 |
60 | NC_009959 | AACTG | 2 | 10 | 54100 | 54109 | 40 % | 20 % | 20 % | 20 % | 159046729 |
61 | NC_009959 | CTGCC | 2 | 10 | 58027 | 58036 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
62 | NC_009959 | CCCGC | 2 | 10 | 59096 | 59105 | 0 % | 0 % | 20 % | 80 % | 159046735 |
63 | NC_009959 | GGCAG | 2 | 10 | 63778 | 63787 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
64 | NC_009959 | CTGGC | 2 | 10 | 65952 | 65961 | 0 % | 20 % | 40 % | 40 % | 159046740 |
65 | NC_009959 | CGCGG | 2 | 10 | 67145 | 67154 | 0 % | 0 % | 60 % | 40 % | 159046741 |
66 | NC_009959 | CTGGG | 2 | 10 | 68070 | 68079 | 0 % | 20 % | 60 % | 20 % | 159046743 |
67 | NC_009959 | GCCGC | 2 | 10 | 68883 | 68892 | 0 % | 0 % | 40 % | 60 % | 159046743 |
68 | NC_009959 | CATGA | 2 | 10 | 69229 | 69238 | 40 % | 20 % | 20 % | 20 % | 159046743 |
69 | NC_009959 | CCGCC | 2 | 10 | 70236 | 70245 | 0 % | 0 % | 20 % | 80 % | 159046745 |
70 | NC_009959 | CGCGG | 2 | 10 | 70450 | 70459 | 0 % | 0 % | 60 % | 40 % | 159046745 |
71 | NC_009959 | TCTGC | 2 | 10 | 71740 | 71749 | 0 % | 40 % | 20 % | 40 % | 251833006 |
72 | NC_009959 | CGGTC | 2 | 10 | 71755 | 71764 | 0 % | 20 % | 40 % | 40 % | 251833006 |