MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI05

Total Repeats: 44

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009959	TCC	2	6	1766	1771	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_009959	CCG	2	6	1861	1866	0 %	0 %	33.33 %	66.67 %	Non-Coding
3	NC_009959	GGA	2	6	1926	1931	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_009959	CGT	2	6	3760	3765	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_009959	GGA	2	6	3823	3828	33.33 %	0 %	66.67 %	0 %	Non-Coding
6	NC_009959	GGC	2	6	5642	5647	0 %	0 %	66.67 %	33.33 %	Non-Coding
7	NC_009959	GCC	2	6	6514	6519	0 %	0 %	33.33 %	66.67 %	Non-Coding
8	NC_009959	CAA	2	6	8795	8800	66.67 %	0 %	0 %	33.33 %	Non-Coding
9	NC_009959	CGG	2	6	8830	8835	0 %	0 %	66.67 %	33.33 %	Non-Coding
10	NC_009959	GGC	2	6	9715	9720	0 %	0 %	66.67 %	33.33 %	Non-Coding
11	NC_009959	GCT	2	6	18234	18239	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_009959	AGG	2	6	21392	21397	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_009959	AGC	2	6	22319	22324	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_009959	TCC	2	6	25106	25111	0 %	33.33 %	0 %	66.67 %	Non-Coding
15	NC_009959	GGC	2	6	25173	25178	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_009959	CGG	2	6	25220	25225	0 %	0 %	66.67 %	33.33 %	Non-Coding
17	NC_009959	GCC	2	6	25956	25961	0 %	0 %	33.33 %	66.67 %	Non-Coding
18	NC_009959	CGC	2	6	29169	29174	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_009959	CGC	3	9	29222	29230	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_009959	CGC	2	6	30562	30567	0 %	0 %	33.33 %	66.67 %	Non-Coding
21	NC_009959	GCG	2	6	30577	30582	0 %	0 %	66.67 %	33.33 %	Non-Coding
22	NC_009959	CGG	2	6	31044	31049	0 %	0 %	66.67 %	33.33 %	Non-Coding
23	NC_009959	GCG	2	6	31061	31066	0 %	0 %	66.67 %	33.33 %	Non-Coding
24	NC_009959	AAG	2	6	31509	31514	66.67 %	0 %	33.33 %	0 %	Non-Coding
25	NC_009959	GGA	2	6	34748	34753	33.33 %	0 %	66.67 %	0 %	Non-Coding
26	NC_009959	GCC	2	6	35817	35822	0 %	0 %	33.33 %	66.67 %	Non-Coding
27	NC_009959	GCC	2	6	35824	35829	0 %	0 %	33.33 %	66.67 %	Non-Coding
28	NC_009959	GCC	2	6	35913	35918	0 %	0 %	33.33 %	66.67 %	Non-Coding
29	NC_009959	CCG	2	6	35919	35924	0 %	0 %	33.33 %	66.67 %	Non-Coding
30	NC_009959	CAC	3	9	37221	37229	33.33 %	0 %	0 %	66.67 %	Non-Coding
31	NC_009959	GAC	2	6	37289	37294	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_009959	TGA	2	6	44949	44954	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
33	NC_009959	CCG	2	6	46612	46617	0 %	0 %	33.33 %	66.67 %	Non-Coding
34	NC_009959	GCG	2	6	46701	46706	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_009959	GGA	2	6	50488	50493	33.33 %	0 %	66.67 %	0 %	Non-Coding
36	NC_009959	CCG	2	6	57965	57970	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_009959	TAA	2	6	58828	58833	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_009959	CCG	2	6	58865	58870	0 %	0 %	33.33 %	66.67 %	Non-Coding
39	NC_009959	CGT	2	6	61515	61520	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40	NC_009959	GTT	2	6	61583	61588	0 %	66.67 %	33.33 %	0 %	Non-Coding
41	NC_009959	AAG	2	6	61788	61793	66.67 %	0 %	33.33 %	0 %	Non-Coding
42	NC_009959	GGA	2	6	66262	66267	33.33 %	0 %	66.67 %	0 %	Non-Coding
43	NC_009959	GCG	2	6	67263	67268	0 %	0 %	66.67 %	33.33 %	Non-Coding
44	NC_009959	GAA	2	6	70186	70191	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.