MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI04

Total Repeats: 39

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009958	GCCATT	2	12	2741	2752	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
2	NC_009958	TGACCA	2	12	3541	3552	33.33 %	16.67 %	16.67 %	33.33 %	159046607
3	NC_009958	TATGCC	2	12	4287	4298	16.67 %	33.33 %	16.67 %	33.33 %	159046607
4	NC_009958	CTACGA	2	12	6326	6337	33.33 %	16.67 %	16.67 %	33.33 %	159046607
5	NC_009958	TCAATA	2	12	16071	16082	50 %	33.33 %	0 %	16.67 %	Non-Coding
6	NC_009958	TGATCG	2	12	16877	16888	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
7	NC_009958	TCATCG	2	12	17451	17462	16.67 %	33.33 %	16.67 %	33.33 %	159046616
8	NC_009958	CTGATC	2	12	18948	18959	16.67 %	33.33 %	16.67 %	33.33 %	159046617
9	NC_009958	ACGATT	2	12	20333	20344	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
10	NC_009958	CTTTTT	2	12	31864	31875	0 %	83.33 %	0 %	16.67 %	Non-Coding
11	NC_009958	TCAACG	2	12	33809	33820	33.33 %	16.67 %	16.67 %	33.33 %	159046633
12	NC_009958	CTCGGC	2	12	39236	39247	0 %	16.67 %	33.33 %	50 %	Non-Coding
13	NC_009958	ACCTCG	2	12	40959	40970	16.67 %	16.67 %	16.67 %	50 %	159046639
14	NC_009958	GCAACC	2	12	42894	42905	33.33 %	0 %	16.67 %	50 %	159046640
15	NC_009958	GACACG	2	12	44359	44370	33.33 %	0 %	33.33 %	33.33 %	159046640
16	NC_009958	CCTGGC	2	12	48195	48206	0 %	16.67 %	33.33 %	50 %	159046645
17	NC_009958	GGCCGA	2	12	50112	50123	16.67 %	0 %	50 %	33.33 %	159046647
18	NC_009958	GTTCTG	2	12	50760	50771	0 %	50 %	33.33 %	16.67 %	159046648
19	NC_009958	GGGCGC	2	12	51094	51105	0 %	0 %	66.67 %	33.33 %	159046648
20	NC_009958	CGAGGC	2	12	53407	53418	16.67 %	0 %	50 %	33.33 %	159046650
21	NC_009958	GGCCCG	2	12	55221	55232	0 %	0 %	50 %	50 %	159046651
22	NC_009958	GCCATT	2	12	56522	56533	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
23	NC_009958	AATGAC	2	12	58803	58814	50 %	16.67 %	16.67 %	16.67 %	159046652
24	NC_009958	TGGAGT	2	12	59085	59096	16.67 %	33.33 %	50 %	0 %	Non-Coding
25	NC_009958	CGAGAA	2	12	59150	59161	50 %	0 %	33.33 %	16.67 %	Non-Coding
26	NC_009958	TGACCA	2	12	62716	62727	33.33 %	16.67 %	16.67 %	33.33 %	159046655
27	NC_009958	TATGCC	2	12	63462	63473	16.67 %	33.33 %	16.67 %	33.33 %	159046655
28	NC_009958	GCCATT	2	12	65416	65427	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
29	NC_009958	GCTGAT	2	12	65856	65867	16.67 %	33.33 %	33.33 %	16.67 %	159046656
30	NC_009958	ATGTCC	2	12	66148	66159	16.67 %	33.33 %	16.67 %	33.33 %	159046656
31	NC_009958	TCGACC	2	12	71875	71886	16.67 %	16.67 %	16.67 %	50 %	159046662
32	NC_009958	CCGCGT	2	12	72446	72457	0 %	16.67 %	33.33 %	50 %	159046662
33	NC_009958	TCGAAA	2	12	74236	74247	50 %	16.67 %	16.67 %	16.67 %	159046664
34	NC_009958	CCCCGC	2	12	75983	75994	0 %	0 %	16.67 %	83.33 %	159046666
35	NC_009958	CCAGGG	2	12	78519	78530	16.67 %	0 %	50 %	33.33 %	159046669
36	NC_009958	CGGCCC	2	12	79817	79828	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_009958	CGGCCG	2	12	80243	80254	0 %	0 %	50 %	50 %	159046670
38	NC_009958	CAGCGC	2	12	81127	81138	16.67 %	0 %	33.33 %	50 %	159046671
39	NC_009958	TTCGAC	2	12	82283	82294	16.67 %	33.33 %	16.67 %	33.33 %	159046672

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.