Penta-nucleotide Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI04
Total Repeats: 74
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009958 | GCGGT | 2 | 10 | 914 | 923 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
2 | NC_009958 | TGGAA | 2 | 10 | 1085 | 1094 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
3 | NC_009958 | GGCAT | 2 | 10 | 1426 | 1435 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
4 | NC_009958 | CGCAG | 2 | 10 | 2945 | 2954 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
5 | NC_009958 | TATTT | 2 | 10 | 3040 | 3049 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
6 | NC_009958 | TCCTG | 2 | 10 | 5564 | 5573 | 0 % | 40 % | 20 % | 40 % | 159046607 |
7 | NC_009958 | CGGGT | 2 | 10 | 6753 | 6762 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
8 | NC_009958 | TCGGC | 2 | 10 | 9878 | 9887 | 0 % | 20 % | 40 % | 40 % | 159046610 |
9 | NC_009958 | CGACC | 2 | 10 | 11026 | 11035 | 20 % | 0 % | 20 % | 60 % | 159046611 |
10 | NC_009958 | AGGGC | 2 | 10 | 11543 | 11552 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
11 | NC_009958 | GCATC | 2 | 10 | 11817 | 11826 | 20 % | 20 % | 20 % | 40 % | 159046612 |
12 | NC_009958 | GTCTG | 2 | 10 | 12034 | 12043 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
13 | NC_009958 | ATTCA | 2 | 10 | 12092 | 12101 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
14 | NC_009958 | GACCG | 2 | 10 | 12896 | 12905 | 20 % | 0 % | 40 % | 40 % | 159046613 |
15 | NC_009958 | TGCGC | 2 | 10 | 13842 | 13851 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
16 | NC_009958 | TCGGC | 2 | 10 | 15125 | 15134 | 0 % | 20 % | 40 % | 40 % | 159046614 |
17 | NC_009958 | GCAGC | 2 | 10 | 16221 | 16230 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
18 | NC_009958 | GATCA | 2 | 10 | 16465 | 16474 | 40 % | 20 % | 20 % | 20 % | 159046615 |
19 | NC_009958 | ATCGG | 2 | 10 | 16523 | 16532 | 20 % | 20 % | 40 % | 20 % | 159046615 |
20 | NC_009958 | CGCAA | 2 | 10 | 18552 | 18561 | 40 % | 0 % | 20 % | 40 % | 159046617 |
21 | NC_009958 | GTTCC | 2 | 10 | 21693 | 21702 | 0 % | 40 % | 20 % | 40 % | 159046623 |
22 | NC_009958 | GCCCC | 2 | 10 | 22799 | 22808 | 0 % | 0 % | 20 % | 80 % | 159046625 |
23 | NC_009958 | GATGC | 2 | 10 | 23653 | 23662 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
24 | NC_009958 | GGCGC | 2 | 10 | 24386 | 24395 | 0 % | 0 % | 60 % | 40 % | 159046626 |
25 | NC_009958 | TCCCC | 2 | 10 | 28385 | 28394 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
26 | NC_009958 | CCGTG | 2 | 10 | 29020 | 29029 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
27 | NC_009958 | GCAGG | 2 | 10 | 29800 | 29809 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
28 | NC_009958 | GGTCG | 2 | 10 | 37547 | 37556 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
29 | NC_009958 | GCACG | 2 | 10 | 38416 | 38425 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
30 | NC_009958 | TTGGA | 2 | 10 | 39164 | 39173 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
31 | NC_009958 | TCCTC | 2 | 10 | 39491 | 39500 | 0 % | 40 % | 0 % | 60 % | 159046638 |
32 | NC_009958 | CAAGC | 2 | 10 | 40985 | 40994 | 40 % | 0 % | 20 % | 40 % | 159046639 |
33 | NC_009958 | CGTCC | 2 | 10 | 42621 | 42630 | 0 % | 20 % | 20 % | 60 % | 159046640 |
34 | NC_009958 | CTGCC | 2 | 10 | 43409 | 43418 | 0 % | 20 % | 20 % | 60 % | 159046640 |
35 | NC_009958 | GTTGC | 2 | 10 | 45324 | 45333 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
36 | NC_009958 | TATAA | 2 | 10 | 46394 | 46403 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
37 | NC_009958 | GGCAT | 2 | 10 | 46528 | 46537 | 20 % | 20 % | 40 % | 20 % | 159046643 |
38 | NC_009958 | GAGTT | 2 | 10 | 46722 | 46731 | 20 % | 40 % | 40 % | 0 % | 159046643 |
39 | NC_009958 | CCGCG | 2 | 10 | 47157 | 47166 | 0 % | 0 % | 40 % | 60 % | 159046644 |
40 | NC_009958 | CGGGC | 2 | 10 | 47247 | 47256 | 0 % | 0 % | 60 % | 40 % | 159046644 |
41 | NC_009958 | CAGCC | 2 | 10 | 49990 | 49999 | 20 % | 0 % | 20 % | 60 % | 159046647 |
42 | NC_009958 | GGGGC | 2 | 10 | 50397 | 50406 | 0 % | 0 % | 80 % | 20 % | 159046647 |
43 | NC_009958 | GCCCG | 2 | 10 | 51404 | 51413 | 0 % | 0 % | 40 % | 60 % | 159046648 |
44 | NC_009958 | CCCGG | 2 | 10 | 52017 | 52026 | 0 % | 0 % | 40 % | 60 % | 159046649 |
45 | NC_009958 | GGGTC | 2 | 10 | 52349 | 52358 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
46 | NC_009958 | CGGAT | 2 | 10 | 52548 | 52557 | 20 % | 20 % | 40 % | 20 % | 159046650 |
47 | NC_009958 | CGGGC | 2 | 10 | 52898 | 52907 | 0 % | 0 % | 60 % | 40 % | 159046650 |
48 | NC_009958 | GGGGT | 2 | 10 | 53477 | 53486 | 0 % | 20 % | 80 % | 0 % | 159046650 |
49 | NC_009958 | GGATC | 2 | 10 | 53905 | 53914 | 20 % | 20 % | 40 % | 20 % | 159046650 |
50 | NC_009958 | GCTGG | 2 | 10 | 55401 | 55410 | 0 % | 20 % | 60 % | 20 % | 159046651 |
51 | NC_009958 | CGCAG | 2 | 10 | 56726 | 56735 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
52 | NC_009958 | CCGAT | 2 | 10 | 60332 | 60341 | 20 % | 20 % | 20 % | 40 % | 159046653 |
53 | NC_009958 | CGCAG | 2 | 10 | 65620 | 65629 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
54 | NC_009958 | CGGCG | 2 | 10 | 66478 | 66487 | 0 % | 0 % | 60 % | 40 % | 159046657 |
55 | NC_009958 | CGGGA | 2 | 10 | 68504 | 68513 | 20 % | 0 % | 60 % | 20 % | 159046659 |
56 | NC_009958 | CCCAG | 2 | 10 | 69861 | 69870 | 20 % | 0 % | 20 % | 60 % | 159046660 |
57 | NC_009958 | GGTAC | 2 | 10 | 70432 | 70441 | 20 % | 20 % | 40 % | 20 % | 159046660 |
58 | NC_009958 | TGGGG | 2 | 10 | 70666 | 70675 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
59 | NC_009958 | CGCGC | 2 | 10 | 71931 | 71940 | 0 % | 0 % | 40 % | 60 % | 159046662 |
60 | NC_009958 | GCCGA | 2 | 10 | 73986 | 73995 | 20 % | 0 % | 40 % | 40 % | 159046664 |
61 | NC_009958 | TCATG | 2 | 10 | 74342 | 74351 | 20 % | 40 % | 20 % | 20 % | 159046664 |
62 | NC_009958 | GGCGC | 2 | 10 | 74415 | 74424 | 0 % | 0 % | 60 % | 40 % | 159046664 |
63 | NC_009958 | CCGCA | 2 | 10 | 77074 | 77083 | 20 % | 0 % | 20 % | 60 % | 159046667 |
64 | NC_009958 | GTCGT | 2 | 10 | 78389 | 78398 | 0 % | 40 % | 40 % | 20 % | 159046669 |
65 | NC_009958 | GCGCC | 2 | 10 | 78471 | 78480 | 0 % | 0 % | 40 % | 60 % | 159046669 |
66 | NC_009958 | CCGGT | 2 | 10 | 78762 | 78771 | 0 % | 20 % | 40 % | 40 % | 159046669 |
67 | NC_009958 | TCCCC | 2 | 10 | 81600 | 81609 | 0 % | 20 % | 0 % | 80 % | 159046671 |
68 | NC_009958 | GCGCC | 2 | 10 | 81883 | 81892 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
69 | NC_009958 | CTGGA | 2 | 10 | 82867 | 82876 | 20 % | 20 % | 40 % | 20 % | 159046673 |
70 | NC_009958 | GGCTC | 2 | 10 | 83433 | 83442 | 0 % | 20 % | 40 % | 40 % | 159046673 |
71 | NC_009958 | TGCGG | 2 | 10 | 84256 | 84265 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
72 | NC_009958 | TCCGG | 2 | 10 | 84276 | 84285 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
73 | NC_009958 | TTCCC | 2 | 10 | 84867 | 84876 | 0 % | 40 % | 0 % | 60 % | 159046675 |
74 | NC_009958 | CAGAT | 2 | 10 | 85515 | 85524 | 40 % | 20 % | 20 % | 20 % | Non-Coding |