Penta-nucleotide Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI04
Total Repeats: 46
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009958 | TCCTG | 2 | 10 | 5564 | 5573 | 0 % | 40 % | 20 % | 40 % | 159046607 |
2 | NC_009958 | TCGGC | 2 | 10 | 9878 | 9887 | 0 % | 20 % | 40 % | 40 % | 159046610 |
3 | NC_009958 | CGACC | 2 | 10 | 11026 | 11035 | 20 % | 0 % | 20 % | 60 % | 159046611 |
4 | NC_009958 | GCATC | 2 | 10 | 11817 | 11826 | 20 % | 20 % | 20 % | 40 % | 159046612 |
5 | NC_009958 | GACCG | 2 | 10 | 12896 | 12905 | 20 % | 0 % | 40 % | 40 % | 159046613 |
6 | NC_009958 | TCGGC | 2 | 10 | 15125 | 15134 | 0 % | 20 % | 40 % | 40 % | 159046614 |
7 | NC_009958 | GATCA | 2 | 10 | 16465 | 16474 | 40 % | 20 % | 20 % | 20 % | 159046615 |
8 | NC_009958 | ATCGG | 2 | 10 | 16523 | 16532 | 20 % | 20 % | 40 % | 20 % | 159046615 |
9 | NC_009958 | CGCAA | 2 | 10 | 18552 | 18561 | 40 % | 0 % | 20 % | 40 % | 159046617 |
10 | NC_009958 | GTTCC | 2 | 10 | 21693 | 21702 | 0 % | 40 % | 20 % | 40 % | 159046623 |
11 | NC_009958 | GCCCC | 2 | 10 | 22799 | 22808 | 0 % | 0 % | 20 % | 80 % | 159046625 |
12 | NC_009958 | GGCGC | 2 | 10 | 24386 | 24395 | 0 % | 0 % | 60 % | 40 % | 159046626 |
13 | NC_009958 | TCCTC | 2 | 10 | 39491 | 39500 | 0 % | 40 % | 0 % | 60 % | 159046638 |
14 | NC_009958 | CAAGC | 2 | 10 | 40985 | 40994 | 40 % | 0 % | 20 % | 40 % | 159046639 |
15 | NC_009958 | CGTCC | 2 | 10 | 42621 | 42630 | 0 % | 20 % | 20 % | 60 % | 159046640 |
16 | NC_009958 | CTGCC | 2 | 10 | 43409 | 43418 | 0 % | 20 % | 20 % | 60 % | 159046640 |
17 | NC_009958 | GGCAT | 2 | 10 | 46528 | 46537 | 20 % | 20 % | 40 % | 20 % | 159046643 |
18 | NC_009958 | GAGTT | 2 | 10 | 46722 | 46731 | 20 % | 40 % | 40 % | 0 % | 159046643 |
19 | NC_009958 | CCGCG | 2 | 10 | 47157 | 47166 | 0 % | 0 % | 40 % | 60 % | 159046644 |
20 | NC_009958 | CGGGC | 2 | 10 | 47247 | 47256 | 0 % | 0 % | 60 % | 40 % | 159046644 |
21 | NC_009958 | CAGCC | 2 | 10 | 49990 | 49999 | 20 % | 0 % | 20 % | 60 % | 159046647 |
22 | NC_009958 | GGGGC | 2 | 10 | 50397 | 50406 | 0 % | 0 % | 80 % | 20 % | 159046647 |
23 | NC_009958 | GCCCG | 2 | 10 | 51404 | 51413 | 0 % | 0 % | 40 % | 60 % | 159046648 |
24 | NC_009958 | CCCGG | 2 | 10 | 52017 | 52026 | 0 % | 0 % | 40 % | 60 % | 159046649 |
25 | NC_009958 | CGGAT | 2 | 10 | 52548 | 52557 | 20 % | 20 % | 40 % | 20 % | 159046650 |
26 | NC_009958 | CGGGC | 2 | 10 | 52898 | 52907 | 0 % | 0 % | 60 % | 40 % | 159046650 |
27 | NC_009958 | GGGGT | 2 | 10 | 53477 | 53486 | 0 % | 20 % | 80 % | 0 % | 159046650 |
28 | NC_009958 | GGATC | 2 | 10 | 53905 | 53914 | 20 % | 20 % | 40 % | 20 % | 159046650 |
29 | NC_009958 | GCTGG | 2 | 10 | 55401 | 55410 | 0 % | 20 % | 60 % | 20 % | 159046651 |
30 | NC_009958 | CCGAT | 2 | 10 | 60332 | 60341 | 20 % | 20 % | 20 % | 40 % | 159046653 |
31 | NC_009958 | CGGCG | 2 | 10 | 66478 | 66487 | 0 % | 0 % | 60 % | 40 % | 159046657 |
32 | NC_009958 | CGGGA | 2 | 10 | 68504 | 68513 | 20 % | 0 % | 60 % | 20 % | 159046659 |
33 | NC_009958 | CCCAG | 2 | 10 | 69861 | 69870 | 20 % | 0 % | 20 % | 60 % | 159046660 |
34 | NC_009958 | GGTAC | 2 | 10 | 70432 | 70441 | 20 % | 20 % | 40 % | 20 % | 159046660 |
35 | NC_009958 | CGCGC | 2 | 10 | 71931 | 71940 | 0 % | 0 % | 40 % | 60 % | 159046662 |
36 | NC_009958 | GCCGA | 2 | 10 | 73986 | 73995 | 20 % | 0 % | 40 % | 40 % | 159046664 |
37 | NC_009958 | TCATG | 2 | 10 | 74342 | 74351 | 20 % | 40 % | 20 % | 20 % | 159046664 |
38 | NC_009958 | GGCGC | 2 | 10 | 74415 | 74424 | 0 % | 0 % | 60 % | 40 % | 159046664 |
39 | NC_009958 | CCGCA | 2 | 10 | 77074 | 77083 | 20 % | 0 % | 20 % | 60 % | 159046667 |
40 | NC_009958 | GTCGT | 2 | 10 | 78389 | 78398 | 0 % | 40 % | 40 % | 20 % | 159046669 |
41 | NC_009958 | GCGCC | 2 | 10 | 78471 | 78480 | 0 % | 0 % | 40 % | 60 % | 159046669 |
42 | NC_009958 | CCGGT | 2 | 10 | 78762 | 78771 | 0 % | 20 % | 40 % | 40 % | 159046669 |
43 | NC_009958 | TCCCC | 2 | 10 | 81600 | 81609 | 0 % | 20 % | 0 % | 80 % | 159046671 |
44 | NC_009958 | CTGGA | 2 | 10 | 82867 | 82876 | 20 % | 20 % | 40 % | 20 % | 159046673 |
45 | NC_009958 | GGCTC | 2 | 10 | 83433 | 83442 | 0 % | 20 % | 40 % | 40 % | 159046673 |
46 | NC_009958 | TTCCC | 2 | 10 | 84867 | 84876 | 0 % | 40 % | 0 % | 60 % | 159046675 |