Tetra-nucleotide Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI04
Total Repeats: 151
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009958 | TCAT | 2 | 8 | 38 | 45 | 25 % | 50 % | 0 % | 25 % | 159046606 |
2 | NC_009958 | AACC | 2 | 8 | 133 | 140 | 50 % | 0 % | 0 % | 50 % | 159046606 |
3 | NC_009958 | ATGG | 2 | 8 | 325 | 332 | 25 % | 25 % | 50 % | 0 % | 159046606 |
4 | NC_009958 | TTAC | 2 | 8 | 430 | 437 | 25 % | 50 % | 0 % | 25 % | 159046606 |
5 | NC_009958 | TCTG | 2 | 8 | 470 | 477 | 0 % | 50 % | 25 % | 25 % | 159046606 |
6 | NC_009958 | CGAT | 2 | 8 | 3451 | 3458 | 25 % | 25 % | 25 % | 25 % | 159046607 |
7 | NC_009958 | GGAG | 2 | 8 | 3980 | 3987 | 25 % | 0 % | 75 % | 0 % | 159046607 |
8 | NC_009958 | CCCT | 2 | 8 | 4151 | 4158 | 0 % | 25 % | 0 % | 75 % | 159046607 |
9 | NC_009958 | GACG | 2 | 8 | 4328 | 4335 | 25 % | 0 % | 50 % | 25 % | 159046607 |
10 | NC_009958 | TGGA | 2 | 8 | 4498 | 4505 | 25 % | 25 % | 50 % | 0 % | 159046607 |
11 | NC_009958 | GGCT | 2 | 8 | 4896 | 4903 | 0 % | 25 % | 50 % | 25 % | 159046607 |
12 | NC_009958 | GGTG | 2 | 8 | 5291 | 5298 | 0 % | 25 % | 75 % | 0 % | 159046607 |
13 | NC_009958 | TTTA | 2 | 8 | 5763 | 5770 | 25 % | 75 % | 0 % | 0 % | 159046607 |
14 | NC_009958 | TGCT | 2 | 8 | 7655 | 7662 | 0 % | 50 % | 25 % | 25 % | 159046608 |
15 | NC_009958 | TTGT | 2 | 8 | 7751 | 7758 | 0 % | 75 % | 25 % | 0 % | 159046608 |
16 | NC_009958 | CGCT | 2 | 8 | 8906 | 8913 | 0 % | 25 % | 25 % | 50 % | 159046609 |
17 | NC_009958 | GACC | 2 | 8 | 9089 | 9096 | 25 % | 0 % | 25 % | 50 % | 159046609 |
18 | NC_009958 | GCCC | 2 | 8 | 9630 | 9637 | 0 % | 0 % | 25 % | 75 % | 159046610 |
19 | NC_009958 | CGGT | 2 | 8 | 10567 | 10574 | 0 % | 25 % | 50 % | 25 % | 159046610 |
20 | NC_009958 | TCCT | 2 | 8 | 10786 | 10793 | 0 % | 50 % | 0 % | 50 % | 159046610 |
21 | NC_009958 | GGGC | 2 | 8 | 10983 | 10990 | 0 % | 0 % | 75 % | 25 % | 159046611 |
22 | NC_009958 | ACCT | 2 | 8 | 11288 | 11295 | 25 % | 25 % | 0 % | 50 % | 159046611 |
23 | NC_009958 | CTGG | 2 | 8 | 12976 | 12983 | 0 % | 25 % | 50 % | 25 % | 159046613 |
24 | NC_009958 | CGCC | 2 | 8 | 13291 | 13298 | 0 % | 0 % | 25 % | 75 % | 159046613 |
25 | NC_009958 | GAAA | 2 | 8 | 13341 | 13348 | 75 % | 0 % | 25 % | 0 % | 159046613 |
26 | NC_009958 | TGCG | 2 | 8 | 15479 | 15486 | 0 % | 25 % | 50 % | 25 % | 159046614 |
27 | NC_009958 | CCTT | 2 | 8 | 16445 | 16452 | 0 % | 50 % | 0 % | 50 % | 159046615 |
28 | NC_009958 | ACCG | 2 | 8 | 16613 | 16620 | 25 % | 0 % | 25 % | 50 % | 159046615 |
29 | NC_009958 | GTCG | 2 | 8 | 16798 | 16805 | 0 % | 25 % | 50 % | 25 % | 159046615 |
30 | NC_009958 | CGCT | 2 | 8 | 17402 | 17409 | 0 % | 25 % | 25 % | 50 % | 159046616 |
31 | NC_009958 | CAGA | 2 | 8 | 17488 | 17495 | 50 % | 0 % | 25 % | 25 % | 159046616 |
32 | NC_009958 | AGCA | 2 | 8 | 17737 | 17744 | 50 % | 0 % | 25 % | 25 % | 159046616 |
33 | NC_009958 | GGCC | 2 | 8 | 17797 | 17804 | 0 % | 0 % | 50 % | 50 % | 159046616 |
34 | NC_009958 | GGCT | 2 | 8 | 18022 | 18029 | 0 % | 25 % | 50 % | 25 % | 159046616 |
35 | NC_009958 | CAGA | 2 | 8 | 18348 | 18355 | 50 % | 0 % | 25 % | 25 % | 159046616 |
36 | NC_009958 | CGGG | 2 | 8 | 18582 | 18589 | 0 % | 0 % | 75 % | 25 % | 159046617 |
37 | NC_009958 | CGAC | 2 | 8 | 19440 | 19447 | 25 % | 0 % | 25 % | 50 % | 159046618 |
38 | NC_009958 | CGCC | 2 | 8 | 19707 | 19714 | 0 % | 0 % | 25 % | 75 % | 159046618 |
39 | NC_009958 | AAAG | 2 | 8 | 20539 | 20546 | 75 % | 0 % | 25 % | 0 % | 159046620 |
40 | NC_009958 | TGAG | 2 | 8 | 21478 | 21485 | 25 % | 25 % | 50 % | 0 % | 159046623 |
41 | NC_009958 | GCCC | 2 | 8 | 22174 | 22181 | 0 % | 0 % | 25 % | 75 % | 159046623 |
42 | NC_009958 | TGGT | 2 | 8 | 22734 | 22741 | 0 % | 50 % | 50 % | 0 % | 159046625 |
43 | NC_009958 | GTAC | 2 | 8 | 22753 | 22760 | 25 % | 25 % | 25 % | 25 % | 159046625 |
44 | NC_009958 | CGCC | 2 | 8 | 24406 | 24413 | 0 % | 0 % | 25 % | 75 % | 159046626 |
45 | NC_009958 | GATT | 2 | 8 | 24447 | 24454 | 25 % | 50 % | 25 % | 0 % | 159046626 |
46 | NC_009958 | GGCC | 2 | 8 | 24469 | 24476 | 0 % | 0 % | 50 % | 50 % | 159046626 |
47 | NC_009958 | CTTT | 2 | 8 | 24487 | 24494 | 0 % | 75 % | 0 % | 25 % | 159046626 |
48 | NC_009958 | CCGG | 2 | 8 | 24883 | 24890 | 0 % | 0 % | 50 % | 50 % | 159046626 |
49 | NC_009958 | ACAA | 2 | 8 | 25206 | 25213 | 75 % | 0 % | 0 % | 25 % | 159046626 |
50 | NC_009958 | CAAT | 2 | 8 | 30508 | 30515 | 50 % | 25 % | 0 % | 25 % | 159046631 |
51 | NC_009958 | GCCA | 2 | 8 | 30842 | 30849 | 25 % | 0 % | 25 % | 50 % | 159046631 |
52 | NC_009958 | CTGG | 2 | 8 | 33531 | 33538 | 0 % | 25 % | 50 % | 25 % | 159046633 |
53 | NC_009958 | GATC | 2 | 8 | 33576 | 33583 | 25 % | 25 % | 25 % | 25 % | 159046633 |
54 | NC_009958 | CTGA | 2 | 8 | 34195 | 34202 | 25 % | 25 % | 25 % | 25 % | 159046634 |
55 | NC_009958 | GCAG | 2 | 8 | 34318 | 34325 | 25 % | 0 % | 50 % | 25 % | 159046634 |
56 | NC_009958 | CCGG | 2 | 8 | 34904 | 34911 | 0 % | 0 % | 50 % | 50 % | 159046634 |
57 | NC_009958 | GCTG | 2 | 8 | 36038 | 36045 | 0 % | 25 % | 50 % | 25 % | 159046635 |
58 | NC_009958 | TGGA | 2 | 8 | 36256 | 36263 | 25 % | 25 % | 50 % | 0 % | 159046635 |
59 | NC_009958 | GACG | 2 | 8 | 36519 | 36526 | 25 % | 0 % | 50 % | 25 % | 159046636 |
60 | NC_009958 | CCGA | 2 | 8 | 37893 | 37900 | 25 % | 0 % | 25 % | 50 % | 159046637 |
61 | NC_009958 | CGAT | 2 | 8 | 40128 | 40135 | 25 % | 25 % | 25 % | 25 % | 159046639 |
62 | NC_009958 | GACA | 2 | 8 | 40266 | 40273 | 50 % | 0 % | 25 % | 25 % | 159046639 |
63 | NC_009958 | CCAC | 2 | 8 | 40572 | 40579 | 25 % | 0 % | 0 % | 75 % | 159046639 |
64 | NC_009958 | GGAG | 2 | 8 | 40951 | 40958 | 25 % | 0 % | 75 % | 0 % | 159046639 |
65 | NC_009958 | CTGC | 2 | 8 | 41051 | 41058 | 0 % | 25 % | 25 % | 50 % | 159046639 |
66 | NC_009958 | TCGG | 2 | 8 | 41069 | 41076 | 0 % | 25 % | 50 % | 25 % | 159046639 |
67 | NC_009958 | GATC | 2 | 8 | 42582 | 42589 | 25 % | 25 % | 25 % | 25 % | 159046640 |
68 | NC_009958 | GCTG | 2 | 8 | 42723 | 42730 | 0 % | 25 % | 50 % | 25 % | 159046640 |
69 | NC_009958 | GACT | 2 | 8 | 43572 | 43579 | 25 % | 25 % | 25 % | 25 % | 159046640 |
70 | NC_009958 | GACC | 2 | 8 | 44076 | 44083 | 25 % | 0 % | 25 % | 50 % | 159046640 |
71 | NC_009958 | TGGC | 2 | 8 | 46106 | 46113 | 0 % | 25 % | 50 % | 25 % | 159046642 |
72 | NC_009958 | GCGG | 2 | 8 | 46645 | 46652 | 0 % | 0 % | 75 % | 25 % | 159046643 |
73 | NC_009958 | TGGG | 2 | 8 | 47317 | 47324 | 0 % | 25 % | 75 % | 0 % | 159046644 |
74 | NC_009958 | ACCG | 2 | 8 | 47824 | 47831 | 25 % | 0 % | 25 % | 50 % | 159046644 |
75 | NC_009958 | GCCA | 2 | 8 | 48109 | 48116 | 25 % | 0 % | 25 % | 50 % | 159046645 |
76 | NC_009958 | GATC | 2 | 8 | 48414 | 48421 | 25 % | 25 % | 25 % | 25 % | 159046645 |
77 | NC_009958 | CGGG | 2 | 8 | 48777 | 48784 | 0 % | 0 % | 75 % | 25 % | 159046645 |
78 | NC_009958 | GGGC | 2 | 8 | 49156 | 49163 | 0 % | 0 % | 75 % | 25 % | 159046646 |
79 | NC_009958 | GGGC | 2 | 8 | 49376 | 49383 | 0 % | 0 % | 75 % | 25 % | 159046646 |
80 | NC_009958 | CCTG | 2 | 8 | 49411 | 49418 | 0 % | 25 % | 25 % | 50 % | 159046646 |
81 | NC_009958 | CGCC | 2 | 8 | 49576 | 49583 | 0 % | 0 % | 25 % | 75 % | 159046646 |
82 | NC_009958 | GGTC | 2 | 8 | 50207 | 50214 | 0 % | 25 % | 50 % | 25 % | 159046647 |
83 | NC_009958 | GGCG | 2 | 8 | 51577 | 51584 | 0 % | 0 % | 75 % | 25 % | 159046648 |
84 | NC_009958 | GCTG | 2 | 8 | 51876 | 51883 | 0 % | 25 % | 50 % | 25 % | 159046649 |
85 | NC_009958 | CGCC | 2 | 8 | 51956 | 51963 | 0 % | 0 % | 25 % | 75 % | 159046649 |
86 | NC_009958 | TCGG | 2 | 8 | 52171 | 52178 | 0 % | 25 % | 50 % | 25 % | 159046649 |
87 | NC_009958 | GGCG | 2 | 8 | 52709 | 52716 | 0 % | 0 % | 75 % | 25 % | 159046650 |
88 | NC_009958 | GGCG | 2 | 8 | 53597 | 53604 | 0 % | 0 % | 75 % | 25 % | 159046650 |
89 | NC_009958 | GCCT | 2 | 8 | 53613 | 53620 | 0 % | 25 % | 25 % | 50 % | 159046650 |
90 | NC_009958 | GCCC | 2 | 8 | 54260 | 54267 | 0 % | 0 % | 25 % | 75 % | 159046650 |
91 | NC_009958 | CCGA | 2 | 8 | 54566 | 54573 | 25 % | 0 % | 25 % | 50 % | 159046650 |
92 | NC_009958 | GCGG | 2 | 8 | 54883 | 54890 | 0 % | 0 % | 75 % | 25 % | 159046650 |
93 | NC_009958 | CCAT | 2 | 8 | 54992 | 54999 | 25 % | 25 % | 0 % | 50 % | 159046651 |
94 | NC_009958 | CGGC | 2 | 8 | 57133 | 57140 | 0 % | 0 % | 50 % | 50 % | 159046652 |
95 | NC_009958 | CAAC | 2 | 8 | 58787 | 58794 | 50 % | 0 % | 0 % | 50 % | 159046652 |
96 | NC_009958 | CAAC | 2 | 8 | 60350 | 60357 | 50 % | 0 % | 0 % | 50 % | 159046653 |
97 | NC_009958 | CGCT | 2 | 8 | 61518 | 61525 | 0 % | 25 % | 25 % | 50 % | 159046654 |
98 | NC_009958 | ATCC | 2 | 8 | 61543 | 61550 | 25 % | 25 % | 0 % | 50 % | 159046654 |
99 | NC_009958 | CGAT | 2 | 8 | 62626 | 62633 | 25 % | 25 % | 25 % | 25 % | 159046655 |
100 | NC_009958 | GGAG | 2 | 8 | 63155 | 63162 | 25 % | 0 % | 75 % | 0 % | 159046655 |
101 | NC_009958 | CCCT | 2 | 8 | 63326 | 63333 | 0 % | 25 % | 0 % | 75 % | 159046655 |
102 | NC_009958 | GACG | 2 | 8 | 63503 | 63510 | 25 % | 0 % | 50 % | 25 % | 159046655 |
103 | NC_009958 | TGGA | 2 | 8 | 63673 | 63680 | 25 % | 25 % | 50 % | 0 % | 159046655 |
104 | NC_009958 | GGCT | 2 | 8 | 64071 | 64078 | 0 % | 25 % | 50 % | 25 % | 159046655 |
105 | NC_009958 | GCCT | 2 | 8 | 65871 | 65878 | 0 % | 25 % | 25 % | 50 % | 159046656 |
106 | NC_009958 | GTCC | 2 | 8 | 66243 | 66250 | 0 % | 25 % | 25 % | 50 % | 159046656 |
107 | NC_009958 | CATG | 2 | 8 | 66656 | 66663 | 25 % | 25 % | 25 % | 25 % | 159046657 |
108 | NC_009958 | TGGC | 2 | 8 | 67488 | 67495 | 0 % | 25 % | 50 % | 25 % | 159046658 |
109 | NC_009958 | TGAC | 2 | 8 | 68034 | 68041 | 25 % | 25 % | 25 % | 25 % | 159046658 |
110 | NC_009958 | CGCC | 2 | 8 | 68198 | 68205 | 0 % | 0 % | 25 % | 75 % | 159046659 |
111 | NC_009958 | CACC | 2 | 8 | 68386 | 68393 | 25 % | 0 % | 0 % | 75 % | 159046659 |
112 | NC_009958 | CCCG | 2 | 8 | 68596 | 68603 | 0 % | 0 % | 25 % | 75 % | 159046659 |
113 | NC_009958 | CTCG | 2 | 8 | 68698 | 68705 | 0 % | 25 % | 25 % | 50 % | 159046659 |
114 | NC_009958 | ATGC | 2 | 8 | 68936 | 68943 | 25 % | 25 % | 25 % | 25 % | 159046659 |
115 | NC_009958 | CGGC | 2 | 8 | 69145 | 69152 | 0 % | 0 % | 50 % | 50 % | 159046659 |
116 | NC_009958 | CTGC | 2 | 8 | 70921 | 70928 | 0 % | 25 % | 25 % | 50 % | 159046661 |
117 | NC_009958 | CGGG | 2 | 8 | 71141 | 71148 | 0 % | 0 % | 75 % | 25 % | 159046661 |
118 | NC_009958 | TTCC | 2 | 8 | 72059 | 72066 | 0 % | 50 % | 0 % | 50 % | 159046662 |
119 | NC_009958 | GTCA | 2 | 8 | 72567 | 72574 | 25 % | 25 % | 25 % | 25 % | 159046662 |
120 | NC_009958 | CCAG | 2 | 8 | 73137 | 73144 | 25 % | 0 % | 25 % | 50 % | 159046663 |
121 | NC_009958 | CCAG | 2 | 8 | 74375 | 74382 | 25 % | 0 % | 25 % | 50 % | 159046664 |
122 | NC_009958 | TGGC | 2 | 8 | 74693 | 74700 | 0 % | 25 % | 50 % | 25 % | 159046665 |
123 | NC_009958 | ACCA | 2 | 8 | 74755 | 74762 | 50 % | 0 % | 0 % | 50 % | 159046665 |
124 | NC_009958 | CGGG | 2 | 8 | 74956 | 74963 | 0 % | 0 % | 75 % | 25 % | 159046665 |
125 | NC_009958 | CGGG | 2 | 8 | 75936 | 75943 | 0 % | 0 % | 75 % | 25 % | 159046666 |
126 | NC_009958 | GCCC | 2 | 8 | 76915 | 76922 | 0 % | 0 % | 25 % | 75 % | 159046667 |
127 | NC_009958 | CGGG | 2 | 8 | 77132 | 77139 | 0 % | 0 % | 75 % | 25 % | 159046667 |
128 | NC_009958 | CCGT | 2 | 8 | 78125 | 78132 | 0 % | 25 % | 25 % | 50 % | 159046668 |
129 | NC_009958 | ATCC | 2 | 8 | 78328 | 78335 | 25 % | 25 % | 0 % | 50 % | 159046669 |
130 | NC_009958 | TCGA | 2 | 8 | 78896 | 78903 | 25 % | 25 % | 25 % | 25 % | 159046669 |
131 | NC_009958 | AGGT | 2 | 8 | 79070 | 79077 | 25 % | 25 % | 50 % | 0 % | 159046669 |
132 | NC_009958 | TCGG | 2 | 8 | 79151 | 79158 | 0 % | 25 % | 50 % | 25 % | 159046669 |
133 | NC_009958 | CCAG | 2 | 8 | 79173 | 79180 | 25 % | 0 % | 25 % | 50 % | 159046669 |
134 | NC_009958 | GCCA | 2 | 8 | 79854 | 79861 | 25 % | 0 % | 25 % | 50 % | 159046670 |
135 | NC_009958 | GATG | 2 | 8 | 79889 | 79896 | 25 % | 25 % | 50 % | 0 % | 159046670 |
136 | NC_009958 | CCCG | 2 | 8 | 80077 | 80084 | 0 % | 0 % | 25 % | 75 % | 159046670 |
137 | NC_009958 | CCCG | 2 | 8 | 80163 | 80170 | 0 % | 0 % | 25 % | 75 % | 159046670 |
138 | NC_009958 | CGGT | 2 | 8 | 80362 | 80369 | 0 % | 25 % | 50 % | 25 % | 159046670 |
139 | NC_009958 | CCCG | 2 | 8 | 80548 | 80555 | 0 % | 0 % | 25 % | 75 % | 159046670 |
140 | NC_009958 | GTTC | 2 | 8 | 81406 | 81413 | 0 % | 50 % | 25 % | 25 % | 159046671 |
141 | NC_009958 | CGAG | 2 | 8 | 81435 | 81442 | 25 % | 0 % | 50 % | 25 % | 159046671 |
142 | NC_009958 | CCCG | 2 | 8 | 81499 | 81506 | 0 % | 0 % | 25 % | 75 % | 159046671 |
143 | NC_009958 | GCCC | 2 | 8 | 82296 | 82303 | 0 % | 0 % | 25 % | 75 % | 159046672 |
144 | NC_009958 | CCAT | 2 | 8 | 82745 | 82752 | 25 % | 25 % | 0 % | 50 % | 159046673 |
145 | NC_009958 | CGCT | 2 | 8 | 83118 | 83125 | 0 % | 25 % | 25 % | 50 % | 159046673 |
146 | NC_009958 | GACC | 2 | 8 | 83301 | 83308 | 25 % | 0 % | 25 % | 50 % | 159046673 |
147 | NC_009958 | GATA | 2 | 8 | 84477 | 84484 | 50 % | 25 % | 25 % | 0 % | 159046675 |
148 | NC_009958 | TCTT | 2 | 8 | 84568 | 84575 | 0 % | 75 % | 0 % | 25 % | 159046675 |
149 | NC_009958 | GAAA | 2 | 8 | 84719 | 84726 | 75 % | 0 % | 25 % | 0 % | 159046675 |
150 | NC_009958 | GTCG | 2 | 8 | 84948 | 84955 | 0 % | 25 % | 50 % | 25 % | 159046675 |
151 | NC_009958 | TTTC | 2 | 8 | 85004 | 85011 | 0 % | 75 % | 0 % | 25 % | 159046675 |