MICAS: Microsatellite Analysis Server 3.0

Tetra-nucleotide Non-Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI03

Total Repeats: 42

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009957	TCAT	2	8	2459	2466	25 %	50 %	0 %	25 %	Non-Coding
2	NC_009957	ATAC	2	8	3787	3794	50 %	25 %	0 %	25 %	Non-Coding
3	NC_009957	ACAA	2	8	4422	4429	75 %	0 %	0 %	25 %	Non-Coding
4	NC_009957	CCCG	2	8	12888	12895	0 %	0 %	25 %	75 %	Non-Coding
5	NC_009957	CTCA	2	8	14888	14895	25 %	25 %	0 %	50 %	Non-Coding
6	NC_009957	ATCG	2	8	26082	26089	25 %	25 %	25 %	25 %	Non-Coding
7	NC_009957	GTTA	2	8	26651	26658	25 %	50 %	25 %	0 %	Non-Coding
8	NC_009957	GTAT	2	8	29499	29506	25 %	50 %	25 %	0 %	Non-Coding
9	NC_009957	CGCC	2	8	30858	30865	0 %	0 %	25 %	75 %	Non-Coding
10	NC_009957	CGAA	2	8	31758	31765	50 %	0 %	25 %	25 %	Non-Coding
11	NC_009957	CCAT	2	8	44616	44623	25 %	25 %	0 %	50 %	Non-Coding
12	NC_009957	GGTA	2	8	44669	44676	25 %	25 %	50 %	0 %	Non-Coding
13	NC_009957	AAAG	2	8	44743	44750	75 %	0 %	25 %	0 %	Non-Coding
14	NC_009957	GCCA	2	8	47088	47095	25 %	0 %	25 %	50 %	Non-Coding
15	NC_009957	ATCT	2	8	48366	48373	25 %	50 %	0 %	25 %	Non-Coding
16	NC_009957	CCCT	2	8	48562	48569	0 %	25 %	0 %	75 %	Non-Coding
17	NC_009957	GACA	2	8	48570	48577	50 %	0 %	25 %	25 %	Non-Coding
18	NC_009957	CCGC	2	8	53723	53730	0 %	0 %	25 %	75 %	Non-Coding
19	NC_009957	CGGA	2	8	53755	53762	25 %	0 %	50 %	25 %	Non-Coding
20	NC_009957	CGGG	2	8	53767	53774	0 %	0 %	75 %	25 %	Non-Coding
21	NC_009957	CAGG	2	8	53799	53806	25 %	0 %	50 %	25 %	Non-Coding
22	NC_009957	CGCC	2	8	54544	54551	0 %	0 %	25 %	75 %	Non-Coding
23	NC_009957	CACG	2	8	57060	57067	25 %	0 %	25 %	50 %	Non-Coding
24	NC_009957	GTTT	2	8	57443	57450	0 %	75 %	25 %	0 %	Non-Coding
25	NC_009957	GGCA	2	8	57476	57483	25 %	0 %	50 %	25 %	Non-Coding
26	NC_009957	GAGT	2	8	76614	76621	25 %	25 %	50 %	0 %	Non-Coding
27	NC_009957	ATCA	2	8	78302	78309	50 %	25 %	0 %	25 %	Non-Coding
28	NC_009957	CGAA	2	8	79092	79099	50 %	0 %	25 %	25 %	Non-Coding
29	NC_009957	AGGG	2	8	79206	79213	25 %	0 %	75 %	0 %	Non-Coding
30	NC_009957	CACT	2	8	79308	79315	25 %	25 %	0 %	50 %	Non-Coding
31	NC_009957	GCAG	2	8	81714	81721	25 %	0 %	50 %	25 %	Non-Coding
32	NC_009957	GGTG	2	8	83746	83753	0 %	25 %	75 %	0 %	Non-Coding
33	NC_009957	GGCG	2	8	85537	85544	0 %	0 %	75 %	25 %	Non-Coding
34	NC_009957	GTCA	2	8	86124	86131	25 %	25 %	25 %	25 %	Non-Coding
35	NC_009957	GGCA	2	8	86242	86249	25 %	0 %	50 %	25 %	Non-Coding
36	NC_009957	CTTG	2	8	86276	86283	0 %	50 %	25 %	25 %	Non-Coding
37	NC_009957	TGCC	2	8	100142	100149	0 %	25 %	25 %	50 %	Non-Coding
38	NC_009957	CTCA	2	8	106527	106534	25 %	25 %	0 %	50 %	Non-Coding
39	NC_009957	AGGA	2	8	107796	107803	50 %	0 %	50 %	0 %	Non-Coding
40	NC_009957	CTTC	2	8	116663	116670	0 %	50 %	0 %	50 %	Non-Coding
41	NC_009957	GCTT	2	8	116821	116828	0 %	50 %	25 %	25 %	Non-Coding
42	NC_009957	ATTT	2	8	123292	123299	25 %	75 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.